RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 TAS1R1Q7RTX1 841 aa15.12■□□□□ 0.01
PRPF18-202ENST00000378572 ELOA2Q8IYF1 753 aaPredicted RBP15.12■□□□□ 0.01
PRPF18-202ENST00000378572 FLCNQ8NFG4 579 aa15.12■□□□□ 0.01
PRPF18-202ENST00000378572 B3GALT6Q96L58 329 aa15.12■□□□□ 0.01
PRPF18-202ENST00000378572 NUP62CLQ9H1M0 184 aa15.12■□□□□ 0.01
PRPF18-202ENST00000378572 CLSTN2Q9H4D0 955 aa15.12■□□□□ 0.01
PRPF18-202ENST00000378572 PIDD1Q9HB75 910 aa15.12■□□□□ 0.01
PRPF18-202ENST00000378572 GIT1Q9Y2X7 761 aa15.12■□□□□ 0.01
PRPF18-202ENST00000378572 DENND4AQ7Z401 1863 aa15.11■□□□□ 0.01
PRPF18-202ENST00000378572 H0Y858 1186 aa15.11■□□□□ 0.01
PRPF18-202ENST00000378572 INPPL1O15357 1258 aa15.11■□□□□ 0.01
PRPF18-202ENST00000378572 SPATA31D3P0C874 917 aa15.11■□□□□ 0.01
PRPF18-202ENST00000378572 SPECC1Q5M775 1068 aa15.11■□□□□ 0.01
PRPF18-202ENST00000378572 SPATA31D4Q6ZUB0 917 aa15.11■□□□□ 0.01
PRPF18-202ENST00000378572 USP49Q70CQ1 688 aa15.11■□□□□ 0.01
PRPF18-202ENST00000378572 PALB2Q86YC2 1186 aa15.11■□□□□ 0.01
PRPF18-202ENST00000378572 MCPH1Q8NEM0 835 aa15.11■□□□□ 0.01
PRPF18-202ENST00000378572 ERMNQ8TAM6 284 aa15.11■□□□□ 0.01
PRPF18-202ENST00000378572 RABGGTAQ92696 567 aa15.11■□□□□ 0.01
PRPF18-202ENST00000378572 EPSTI1Q96J88 318 aa15.11■□□□□ 0.01
PRPF18-202ENST00000378572 MIOSQ9NXC5 875 aa15.11■□□□□ 0.01
PRPF18-202ENST00000378572 USP25Q9UHP3 1055 aa15.11■□□□□ 0.01
PRPF18-202ENST00000378572 CCDC195A0A1B0GUA6 201 aa15.1■□□□□ 0.01
PRPF18-202ENST00000378572 ARHGEF35A5YM69 484 aa15.1■□□□□ 0.01
PRPF18-202ENST00000378572 UBA7P41226 1012 aa15.1■□□□□ 0.01
PRPF18-202ENST00000378572 POU5F1BQ06416 359 aa15.1■□□□□ 0.01
PRPF18-202ENST00000378572 GRIK3Q13003 919 aa15.1■□□□□ 0.01
PRPF18-202ENST00000378572 AMHR2Q16671 573 aa15.1■□□□□ 0.01
PRPF18-202ENST00000378572 C15orf39Q6ZRI6 1047 aa15.1■□□□□ 0.01
PRPF18-202ENST00000378572 RBM43Q6ZSC3 357 aaKnown RBP15.1■□□□□ 0.01
PRPF18-202ENST00000378572 IFNLR1Q8IU57 520 aaPredicted RBP15.1■□□□□ 0.01
PRPF18-202ENST00000378572 RIN2Q8WYP3 895 aaPredicted RBP15.1■□□□□ 0.01
PRPF18-202ENST00000378572 SMG7Q92540 1137 aaKnown RBP15.1■□□□□ 0.01
PRPF18-202ENST00000378572 STAMQ92783 540 aa15.1■□□□□ 0.01
PRPF18-202ENST00000378572 PRMT7Q9NVM4 692 aaPredicted RBP15.1■□□□□ 0.01
PRPF18-202ENST00000378572 STK24Q9Y6E0 443 aa15.1■□□□□ 0.01
PRPF18-202ENST00000378572 PLXNA3P51805 1871 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 GFRA3O60609 400 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 TADA2AO75478 443 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 DSC1Q08554 894 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 TDGQ13569 410 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 ZSCAN23Q3MJ62 389 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 FUT10Q6P4F1 479 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 POTEGQ6S5H5 508 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 TMEM105Q8N8V8 129 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 HASPINQ8TF76 798 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 NFKBIZQ9BYH8 718 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 TUFT1Q9NNX1 390 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 LRWD1Q9UFC0 647 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 C2orf16Q68DN1 1984 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 MYO10Q9HD67 2058 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 STK25O00506 426 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 GALR2O43603 387 aaPredicted RBP15.09■□□□□ 0.01
PRPF18-202ENST00000378572 LILRB3O75022 631 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 RFPL2O75678 378 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 DSG1Q02413 1049 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 USP41Q3LFD5 358 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 ASTLQ6HA08 431 aaPredicted RBP15.09■□□□□ 0.01
PRPF18-202ENST00000378572 KRBA2Q6ZNG9 492 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 DEPTORQ8TB45 409 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 NACC1Q96RE7 527 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 C2orf40Q9H1Z8 148 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 TNMDQ9H2S6 317 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 CACNG4Q9UBN1 327 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 CCDC39Q9UFE4 941 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 ADAM28Q9UKQ2 775 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 CLUHO75153 1309 aa15.09■□□□□ 0.01
PRPF18-202ENST00000378572 CASTOR2A6NHX0 329 aa15.08■□□□□ 0
PRPF18-202ENST00000378572 N4BP3O15049 544 aa15.08■□□□□ 0
PRPF18-202ENST00000378572 POLR2DO15514 142 aaKnown RBP15.08■□□□□ 0
PRPF18-202ENST00000378572 MED24O75448 989 aa15.08■□□□□ 0
PRPF18-202ENST00000378572 SF3B1O75533 1304 aaKnown RBP eCLIP15.08■□□□□ 0
PRPF18-202ENST00000378572 RPL17P18621 184 aaKnown RBP15.08■□□□□ 0
PRPF18-202ENST00000378572 ZNF445P59923 1031 aa15.08■□□□□ 0
PRPF18-202ENST00000378572 CACNB1Q02641 598 aaPredicted RBP15.08■□□□□ 0
PRPF18-202ENST00000378572 CREMQ03060 361 aa15.08■□□□□ 0
PRPF18-202ENST00000378572 PRPF4BQ13523 1007 aaKnown RBP15.08■□□□□ 0
PRPF18-202ENST00000378572 HSP90AA2PQ14568 343 aaPredicted RBP15.08■□□□□ 0
PRPF18-202ENST00000378572 KIAA0319Q5VV43 1072 aa15.08■□□□□ 0
PRPF18-202ENST00000378572 GET4Q7L5D6 327 aaPredicted RBP15.08■□□□□ 0
PRPF18-202ENST00000378572 CATSPER3Q86XQ3 398 aa15.08■□□□□ 0
PRPF18-202ENST00000378572 IQUBQ8NA54 791 aa15.08■□□□□ 0
PRPF18-202ENST00000378572 CMASQ8NFW8 434 aaPredicted RBP15.08■□□□□ 0
PRPF18-202ENST00000378572 CCDC34Q96HJ3 373 aa15.08■□□□□ 0
PRPF18-202ENST00000378572 PRIMPOLQ96LW4 560 aa15.08■□□□□ 0
PRPF18-202ENST00000378572 ADPGKQ9BRR6 497 aa15.08■□□□□ 0
PRPF18-202ENST00000378572 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.08■□□□□ 0
PRPF18-202ENST00000378572 ACTN4O43707 911 aaKnown RBP15.07■□□□□ 0
PRPF18-202ENST00000378572 PRKCBP05771 671 aa15.07■□□□□ 0
PRPF18-202ENST00000378572 XRCC6P12956 609 aaKnown RBP eCLIP15.07■□□□□ 0
PRPF18-202ENST00000378572 NUBP1P53384 320 aa15.07■□□□□ 0
PRPF18-202ENST00000378572 E2F4Q16254 413 aa15.07■□□□□ 0
PRPF18-202ENST00000378572 MAPK6Q16659 721 aa15.07■□□□□ 0
PRPF18-202ENST00000378572 KRT79Q5XKE5 535 aa15.07■□□□□ 0
PRPF18-202ENST00000378572 HAUS3Q68CZ6 603 aa15.07■□□□□ 0
PRPF18-202ENST00000378572 PADI6Q6TGC4 694 aa15.07■□□□□ 0
PRPF18-202ENST00000378572 CEP57Q86XR8 500 aa15.07■□□□□ 0
PRPF18-202ENST00000378572 SIX5Q8N196 739 aa15.07■□□□□ 0
PRPF18-202ENST00000378572 MMTAG2Q9BU76 263 aaKnown RBP15.07■□□□□ 0
PRPF18-202ENST00000378572 GPR62Q9BZJ7 368 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms