RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 CLDN3O15551 220 aa12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 TRAK2O60296 914 aa12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 TOM1L1O75674 476 aa12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 KIF4AO95239 1232 aa12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 F13A1P00488 732 aa12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 CNPP09543 421 aaKnown RBP12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 NASPP49321 788 aaPredicted RBP12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 NCKAP1LP55160 1127 aa12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 USP41Q3LFD5 358 aa12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 CES5AQ6NT32 575 aa12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 SYCE2Q6PIF2 218 aa12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 TMEM184AQ6ZMB5 413 aa12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 SV2BQ7L1I2 683 aa12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 PPFIBP1Q86W92 1011 aa12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 CEP57Q86XR8 500 aa12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 C12orf76Q8N812 135 aaPredicted RBP12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 LINC00301Q8NCQ3 95 aa12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 RIN2Q8WYP3 895 aaPredicted RBP12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 RPGRIP1Q96KN7 1286 aa12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 NTPCRQ9BSD7 190 aaKnown RBP12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 GPR62Q9BZJ7 368 aa12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 PTPRHQ9HD43 1115 aa12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 TSHZ2Q9NRE2 1034 aa12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 DZANK1Q9NVP4 752 aa12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 IRAK3Q9Y616 596 aa12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 ADH1AP07327 375 aa12.65□□□□□ -0.38
SMARCE1-203ENST00000377808 WEE2P0C1S8 567 aa12.65□□□□□ -0.38
SMARCE1-203ENST00000377808 PDIA4P13667 645 aaKnown RBP12.65□□□□□ -0.38
SMARCE1-203ENST00000377808 HOXB8P17481 243 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-203ENST00000377808 PROZP22891 400 aa12.65□□□□□ -0.38
SMARCE1-203ENST00000377808 NMT1P30419 496 aaKnown RBP12.65□□□□□ -0.38
SMARCE1-203ENST00000377808 PKP1Q13835 747 aa12.65□□□□□ -0.38
SMARCE1-203ENST00000377808 KCNC3Q14003 757 aa12.65□□□□□ -0.38
SMARCE1-203ENST00000377808 CBX2Q14781 532 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-203ENST00000377808 ZPBP2Q6X784 338 aa12.65□□□□□ -0.38
SMARCE1-203ENST00000377808 DDX12PQ92771 950 aa12.65□□□□□ -0.38
SMARCE1-203ENST00000377808 GOLGA2P5Q9HBQ8 144 aa12.65□□□□□ -0.38
SMARCE1-203ENST00000377808 CDH22Q9UJ99 828 aa12.65□□□□□ -0.38
SMARCE1-203ENST00000377808 TBX20Q9UMR3 447 aa12.65□□□□□ -0.38
SMARCE1-203ENST00000377808 MYH15Q9Y2K3 1946 aa12.65□□□□□ -0.38
SMARCE1-203ENST00000377808 SMIM28A0A1B0GU29 152 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 TEX28O15482 410 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 B3GAT3O94766 335 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 YEATS4O95619 227 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 GLUD1P00367 558 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 IDEP14735 1019 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 RPL17P18621 184 aaKnown RBP12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 CLCN4P51793 760 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 CLCNKBP51801 687 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 ZNF131P52739 623 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 DSG1Q02413 1049 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 FAM171A1Q5VUB5 890 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 KANK3Q6NY19 840 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 TMC5Q6UXY8 1006 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 SFR1Q86XK3 245 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 PALB2Q86YC2 1186 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 KHSRPQ92945 711 aaKnown RBP eCLIP12.64□□□□□ -0.396e-7■■■■■ 30.3
SMARCE1-203ENST00000377808 SNX27Q96L92 541 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 FBXL18Q96ME1 805 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 PPP1R10Q96QC0 940 aaKnown RBP12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 PHF7Q9BWX1 381 aaPredicted RBP12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 S1PR5Q9H228 398 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 EPHX3Q9H6B9 360 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 SFXN1Q9H9B4 322 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 MAN1C1Q9NR34 630 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 SLC38A7Q9NVC3 462 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 TBC1D7Q9P0N9 293 aa12.64□□□□□ -0.39
SMARCE1-203ENST00000377808 A0A087X0B3 334 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 MYMKA6NI61 221 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 ABLIM1O14639 778 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 PPP6R2O75170 966 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 BRD1O95696 1058 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 SPATA31D3P0C874 917 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 CXCL8P10145 99 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 ME1P48163 572 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 ITIH3Q06033 890 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 MCL1Q07820 350 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 ELAVL2Q12926 359 aaKnown RBP12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 NAB2Q15742 525 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 ZC2HC1CQ53FD0 456 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 RTP2Q5QGT7 225 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 KIAA0319Q5VV43 1072 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 ELMSAN1Q6PJG2 1045 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 PRSS55Q6UWB4 352 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 SPATA31D4Q6ZUB0 917 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 RNF168Q8IYW5 571 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 SLC22A17Q8WUG5 538 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 SUSD6Q92537 303 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 C18orf25Q96B23 403 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 DHX58Q96C10 678 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 FAM212AQ96EL1 285 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 RIPOR3Q96MK2 946 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 UROC1Q96N76 676 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 TTPALQ9BTX7 342 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 MSTO1Q9BUK6 570 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 ADAM7Q9H2U9 754 aa12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 MRPL44Q9H9J2 332 aaKnown RBP12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 MORC2Q9Y6X9 1032 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-203ENST00000377808 FAM86C2PA6NEL3 165 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms