RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 C1orf54Q8WWF1 131 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 DCUN1D1Q96GG9 259 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 NPTXRO95502 500 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 KCNB1Q14721 858 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 SV2CQ496J9 727 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 INTUQ9ULD6 942 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 CFAP69A5D8W1 941 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 HBP1O60381 514 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 RTN2O75298 545 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 LAMC2Q13753 1193 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 SGSM1Q2NKQ1 1148 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 KLHL29Q96CT2 875 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 ZNF212Q9UDV6 495 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 SLC4A7Q9Y6M7 1214 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 C17orf102A2RUQ5 167 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 SCP2P22307 547 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 RGS2P41220 211 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 PTK2BQ14289 1009 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 CASP8Q14790 479 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 TSGA10IPQ3SY00 556 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 NUGGCQ68CJ6 796 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 TRMT10CQ7L0Y3 403 aaKnown RBP14.41□□□□□ -0.1
GPC6-201ENST00000377047 WDR75Q8IWA0 830 aaKnown RBP14.41□□□□□ -0.1
GPC6-201ENST00000377047 TRIM59Q8IWR1 403 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 ZBED8Q8IZ13 594 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 SLC30A5Q8TAD4 765 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 CCDC138Q96M89 665 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 TRIM54Q9BYV2 358 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 TRIM9Q9C026 710 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 MUC3BQ9H195 1237 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 GPR75-ASB3A0A0A6YYF3 556 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 SYNDIG1LA6NDD5 238 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 CTIFO43310 598 aaKnown RBP14.41□□□□□ -0.1
GPC6-201ENST00000377047 SLC8A1P32418 973 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 IFNA8P32881 189 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 TCF7P36402 384 aaPredicted RBP14.41□□□□□ -0.1
GPC6-201ENST00000377047 ACAD11Q709F0 780 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 MORC4Q8TE76 937 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 EXOC4Q96A65 974 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 GLT1D1Q96MS3 346 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 TRIM15Q9C019 465 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 SH3BP1Q9Y3L3 701 aa14.41□□□□□ -0.1
GPC6-201ENST00000377047 HMGB1P1B2RPK0 211 aaPredicted RBP14.4□□□□□ -0.1
GPC6-201ENST00000377047 EPM2AIP1Q7L775 607 aaPredicted RBP14.4□□□□□ -0.1
GPC6-201ENST00000377047 STKLD1Q8NE28 680 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 OSBPL9Q96SU4 736 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 PRPF4O43172 522 aaKnown RBP eCLIP14.4□□□□□ -0.1
GPC6-201ENST00000377047 IL18RAPO95256 599 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 EIF3EP60228 445 aaKnown RBP14.4□□□□□ -0.1
GPC6-201ENST00000377047 ADARB2Q9NS39 739 aaKnown RBP14.4□□□□□ -0.1
GPC6-201ENST00000377047 CCDC151A5D8V7 595 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 INTS5Q6P9B9 1019 aaKnown RBP14.4□□□□□ -0.1
GPC6-201ENST00000377047 EMBQ6PCB8 327 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 LCA5Q86VQ0 697 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 RFFLQ8WZ73 363 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 MED15Q96RN5 788 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.4□□□□□ -0.14e-10■□□□□ 10.5
GPC6-201ENST00000377047 RRN3P2A6NIE6 340 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 EPHX2P34913 555 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 ARHGDIAP52565 204 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 ATXN7L3BQ96GX2 97 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 BCORL1Q5H9F3 1711 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 C2CD2LO14523 706 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 MAPK13O15264 365 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 THPOP40225 353 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 STILQ15468 1287 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 ZC2HC1CQ53FD0 456 aaPredicted RBP14.4□□□□□ -0.1
GPC6-201ENST00000377047 IL31Q6EBC2 164 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 DHX40Q8IX18 779 aaKnown RBP14.4□□□□□ -0.1
GPC6-201ENST00000377047 CCSER1Q9C0I3 900 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 UPF3AQ9H1J1 476 aaKnown RBP14.4□□□□□ -0.1
GPC6-201ENST00000377047 PPARGC1AQ9UBK2 798 aaKnown RBP14.4□□□□□ -0.1
GPC6-201ENST00000377047 APEX2Q9UBZ4 518 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 L3MBTL1Q9Y468 752 aa14.4□□□□□ -0.1
GPC6-201ENST00000377047 PPRC1Q5VV67 1664 aaKnown RBP14.4□□□□□ -0.11
GPC6-201ENST00000377047 CHRNA3P32297 505 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 PMS2P54278 862 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 DCP1BQ8IZD4 617 aaKnown RBP14.39□□□□□ -0.11
GPC6-201ENST00000377047 ASAP3Q8TDY4 903 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 USP33Q8TEY7 942 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 PTPRUQ92729 1446 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 SNF8Q96H20 258 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 PITPNM3Q9BZ71 974 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.39□□□□□ -0.11
GPC6-201ENST00000377047 KCNH7Q9NS40 1196 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 FAM49BQ9NUQ9 324 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 A0A087WUV0 522 aaPredicted RBP14.39□□□□□ -0.11
GPC6-201ENST00000377047 KCNN4O15554 427 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 STMN1P16949 149 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 GTF2H3Q13889 308 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 CCDC137Q6PK04 289 aaKnown RBP14.39□□□□□ -0.11
GPC6-201ENST00000377047 PPHLN1Q8NEY8 458 aaKnown RBP14.39□□□□□ -0.11
GPC6-201ENST00000377047 DDX47Q9H0S4 455 aaKnown RBP14.39□□□□□ -0.11
GPC6-201ENST00000377047 SYF2O95926 243 aaKnown RBP14.39□□□□□ -0.11
GPC6-201ENST00000377047 SEMA3FQ13275 785 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 RAB42Q8N4Z0 105 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 EFHBQ8N7U6 833 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 KCND2Q9NZV8 630 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 CPSF2Q9P2I0 782 aaKnown RBP14.39□□□□□ -0.11
GPC6-201ENST00000377047 PCDHB8Q9UN66 801 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms