RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 GPC3P51654 580 aa13.6□□□□□ -0.23
CLCN6-206ENST00000376496 INHBEP58166 350 aa13.6□□□□□ -0.23
CLCN6-206ENST00000376496 C15orf39Q6ZRI6 1047 aa13.6□□□□□ -0.23
CLCN6-206ENST00000376496 ZNF662Q6ZS27 426 aa13.6□□□□□ -0.23
CLCN6-206ENST00000376496 SMC1BQ8NDV3 1235 aa13.6□□□□□ -0.23
CLCN6-206ENST00000376496 ERO1AQ96HE7 468 aa13.6□□□□□ -0.23
CLCN6-206ENST00000376496 APBA2Q99767 749 aa13.6□□□□□ -0.23
CLCN6-206ENST00000376496 MTMR12Q9C0I1 747 aa13.6□□□□□ -0.23
CLCN6-206ENST00000376496 MYO1AQ9UBC5 1043 aa13.6□□□□□ -0.23
CLCN6-206ENST00000376496 PACSIN2Q9UNF0 486 aaPredicted RBP13.6□□□□□ -0.23
CLCN6-206ENST00000376496 PPME1Q9Y570 386 aa13.6□□□□□ -0.23
CLCN6-206ENST00000376496 TRIP12Q14669 1992 aaPredicted RBP13.59□□□□□ -0.23
CLCN6-206ENST00000376496 A6NJR5 290 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 PJA2O43164 708 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 FTCDO95954 541 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 AMPD2Q01433 879 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 ZACNQ401N2 412 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 RUFY4Q6ZNE9 571 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 NOP9Q86U38 636 aaKnown RBP13.59□□□□□ -0.23
CLCN6-206ENST00000376496 TSGA10Q9BZW7 698 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 C2orf40Q9H1Z8 148 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 CDT1Q9H211 546 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 APOBEC3GQ9HC16 384 aaKnown RBP13.59□□□□□ -0.23
CLCN6-206ENST00000376496 KIAA1586Q9HCI6 787 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 ZCCHC17Q9NP64 241 aaKnown RBP13.59□□□□□ -0.23
CLCN6-206ENST00000376496 CDC23Q9UJX2 597 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 BZW2Q9Y6E2 419 aaKnown RBP13.59□□□□□ -0.23
CLCN6-206ENST00000376496 ZNF236Q9UL36 1845 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 CA12O43570 354 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 CST3P01034 146 aaPredicted RBP13.59□□□□□ -0.23
CLCN6-206ENST00000376496 CXCL8P10145 99 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 KRT5P13647 590 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 ABCD1P33897 745 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 TM4SF4P48230 202 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 NAB2Q15742 525 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 TEX35Q5T0J7 233 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 EXOC8Q8IYI6 725 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 TRIB2Q92519 343 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 SYT11Q9BT88 431 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 PTPRHQ9HD43 1115 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 RNF19AQ9NV58 838 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 SMARCAL1Q9NZC9 954 aa13.59□□□□□ -0.23
CLCN6-206ENST00000376496 MGAMO43451 1857 aa13.58□□□□□ -0.23
CLCN6-206ENST00000376496 OGTO15294 1046 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 MAGEB2O15479 319 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 PHACTR2O75167 634 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 PALMO75781 387 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 HOXD8P13378 290 aaPredicted RBP13.58□□□□□ -0.24
CLCN6-206ENST00000376496 TNFAIP3P21580 790 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 PHKA2P46019 1235 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 FLT3LGP49771 235 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 KIF22Q14807 665 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 NFRKBQ6P4R8 1299 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 MPZL3Q6UWV2 235 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 TSHZ1Q6ZSZ6 1077 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 USP37Q86T82 979 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 RPUSD2Q8IZ73 545 aaKnown RBP13.58□□□□□ -0.24
CLCN6-206ENST00000376496 SLC30A5Q8TAD4 765 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 EHD2Q9NZN4 543 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 MEFVO15553 781 aaPredicted RBP13.58□□□□□ -0.24
CLCN6-206ENST00000376496 TACC1O75410 805 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 TADA3O75528 432 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 LDHAP00338 332 aaKnown RBP13.58□□□□□ -0.24
CLCN6-206ENST00000376496 ARF4P18085 180 aaPredicted RBP13.58□□□□□ -0.24
CLCN6-206ENST00000376496 TMOD1P28289 359 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 GALCP54803 685 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 MFAP3P55082 362 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 TFAMQ00059 246 aaKnown RBP13.58□□□□□ -0.24
CLCN6-206ENST00000376496 PRKCZQ05513 592 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 MCL1Q07820 350 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 MFSD10Q14728 455 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 AMHR2Q16671 573 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 BRSK2Q8IWQ3 736 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 MSL3Q8N5Y2 521 aaKnown RBP13.58□□□□□ -0.24
CLCN6-206ENST00000376496 PCDHB18PQ96TA0 734 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 CGRRF1Q99675 332 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 AGPAT1Q99943 283 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 CPSF3Q9UKF6 684 aaKnown RBP13.58□□□□□ -0.24
CLCN6-206ENST00000376496 NENFQ9UMX5 172 aa13.58□□□□□ -0.24
CLCN6-206ENST00000376496 PGK1P00558 417 aa13.57□□□□□ -0.24
CLCN6-206ENST00000376496 MMEP08473 750 aa13.57□□□□□ -0.24
CLCN6-206ENST00000376496 CHRNB2P17787 502 aa13.57□□□□□ -0.24
CLCN6-206ENST00000376496 NOP2P46087 812 aaKnown RBP13.57□□□□□ -0.24
CLCN6-206ENST00000376496 MCCD1P59942 119 aaPredicted RBP13.57□□□□□ -0.24
CLCN6-206ENST00000376496 CLDN10P78369 228 aa13.57□□□□□ -0.24
CLCN6-206ENST00000376496 EFCAB13Q8IY85 973 aa13.57□□□□□ -0.24
CLCN6-206ENST00000376496 SHC3Q92529 594 aa13.57□□□□□ -0.24
CLCN6-206ENST00000376496 KCNN1Q92952 543 aa13.57□□□□□ -0.24
CLCN6-206ENST00000376496 MAP7D2Q96T17 732 aa13.57□□□□□ -0.24
CLCN6-206ENST00000376496 NUB1Q9Y5A7 615 aa13.57□□□□□ -0.24
CLCN6-206ENST00000376496 PMM2O15305 246 aa13.57□□□□□ -0.24
CLCN6-206ENST00000376496 TREHO43280 583 aa13.57□□□□□ -0.24
CLCN6-206ENST00000376496 F2P00734 622 aa13.57□□□□□ -0.24
CLCN6-206ENST00000376496 C6orf222P0C671 652 aaPredicted RBP13.57□□□□□ -0.24
CLCN6-206ENST00000376496 PROZP22891 400 aa13.57□□□□□ -0.24
CLCN6-206ENST00000376496 GTF2H1P32780 548 aa13.57□□□□□ -0.24
CLCN6-206ENST00000376496 BMS1Q14692 1282 aaKnown RBP13.57□□□□□ -0.24
CLCN6-206ENST00000376496 TRAPPC11Q7Z392 1133 aa13.57□□□□□ -0.24
CLCN6-206ENST00000376496 VPS36Q86VN1 386 aa13.57□□□□□ -0.24
CLCN6-206ENST00000376496 FAM71AQ8IYT1 594 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms