RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 NAA25Q14CX7 972 aa8.82□□□□□ -1
UBR4-202ENST00000375224 PSMD6Q15008 389 aa8.82□□□□□ -1
UBR4-202ENST00000375224 PPP2R5EQ16537 467 aa8.82□□□□□ -1
UBR4-202ENST00000375224 NT5DC3Q86UY8 548 aa8.82□□□□□ -1
UBR4-202ENST00000375224 FAM71BQ8TC56 605 aa8.82□□□□□ -1
UBR4-202ENST00000375224 GTF3C2Q8WUA4 911 aaPredicted RBP8.82□□□□□ -1
UBR4-202ENST00000375224 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.82□□□□□ -1
UBR4-202ENST00000375224 MS4A14Q96JA4 679 aa8.82□□□□□ -1
UBR4-202ENST00000375224 NAP1L3Q99457 506 aaPredicted RBP8.82□□□□□ -1
UBR4-202ENST00000375224 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.82□□□□□ -16e-9■■□□□ 12.8
UBR4-202ENST00000375224 PDE11AQ9HCR9 933 aa8.82□□□□□ -1
UBR4-202ENST00000375224 GSTTP1A0A1W2PQM5 241 aa8.82□□□□□ -1
UBR4-202ENST00000375224 CEP104O60308 925 aa8.82□□□□□ -1
UBR4-202ENST00000375224 ATP4AP20648 1035 aa8.82□□□□□ -1
UBR4-202ENST00000375224 PDE6CP51160 858 aa8.82□□□□□ -1
UBR4-202ENST00000375224 DNA2P51530 1060 aa8.82□□□□□ -1
UBR4-202ENST00000375224 SOX10P56693 466 aa8.82□□□□□ -1
UBR4-202ENST00000375224 GCNT1Q02742 428 aa8.82□□□□□ -1
UBR4-202ENST00000375224 NNTQ13423 1086 aa8.82□□□□□ -1
UBR4-202ENST00000375224 KCTD2Q14681 263 aa8.82□□□□□ -1
UBR4-202ENST00000375224 WDR44Q5JSH3 913 aa8.82□□□□□ -1
UBR4-202ENST00000375224 ZSWIM2Q8NEG5 633 aa8.82□□□□□ -1
UBR4-202ENST00000375224 OLIG1Q8TAK6 271 aa8.82□□□□□ -1
UBR4-202ENST00000375224 TCP11Q8WWU5 503 aa8.82□□□□□ -1
UBR4-202ENST00000375224 TATDN2Q93075 761 aa8.82□□□□□ -1
UBR4-202ENST00000375224 CDCA5Q96FF9 252 aa8.82□□□□□ -1
UBR4-202ENST00000375224 HES6Q96HZ4 224 aa8.82□□□□□ -1
UBR4-202ENST00000375224 FAM213AQ9BRX8 229 aa8.82□□□□□ -1
UBR4-202ENST00000375224 FHDC1Q9C0D6 1143 aaPredicted RBP8.82□□□□□ -1
UBR4-202ENST00000375224 MROH8Q9H579 483 aa8.82□□□□□ -1
UBR4-202ENST00000375224 AGO2Q9UKV8 859 aaKnown RBP8.82□□□□□ -1
UBR4-202ENST00000375224 PACSIN2Q9UNF0 486 aaPredicted RBP8.82□□□□□ -1
UBR4-202ENST00000375224 ADGRA3Q8IWK6 1321 aa8.82□□□□□ -1
UBR4-202ENST00000375224 LRRIQ4A6NIV6 560 aa8.81□□□□□ -1
UBR4-202ENST00000375224 ABCB4P21439 1286 aa8.81□□□□□ -1
UBR4-202ENST00000375224 GLRA2P23416 452 aa8.81□□□□□ -1
UBR4-202ENST00000375224 EFNA5P52803 228 aa8.81□□□□□ -1
UBR4-202ENST00000375224 BPIFB4P59827 614 aa8.81□□□□□ -1
UBR4-202ENST00000375224 CLDN10P78369 228 aa8.81□□□□□ -1
UBR4-202ENST00000375224 SV2AQ7L0J3 742 aa8.81□□□□□ -1
UBR4-202ENST00000375224 RASGEF1CQ8N431 466 aa8.81□□□□□ -1
UBR4-202ENST00000375224 AENQ8WTP8 325 aaKnown RBP8.81□□□□□ -1
UBR4-202ENST00000375224 PSPC1Q8WXF1 523 aaKnown RBP8.81□□□□□ -1
UBR4-202ENST00000375224 DHX38Q92620 1227 aaKnown RBP8.81□□□□□ -1
UBR4-202ENST00000375224 TMEM59LQ9UK28 342 aa8.81□□□□□ -1
UBR4-202ENST00000375224 TTC7AQ9ULT0 858 aaPredicted RBP8.81□□□□□ -1
UBR4-202ENST00000375224 MIF4GDA9UHW6 222 aaKnown RBP8.81□□□□□ -1
UBR4-202ENST00000375224 SORBS3O60504 671 aa8.81□□□□□ -1
UBR4-202ENST00000375224 GGPS1O95749 300 aa8.81□□□□□ -1
UBR4-202ENST00000375224 FTLP02792 175 aaPredicted RBP8.81□□□□□ -1
UBR4-202ENST00000375224 DLATP10515 647 aaKnown RBP8.81□□□□□ -1
UBR4-202ENST00000375224 AARSP49588 968 aaKnown RBP eCLIP8.81□□□□□ -15e-9■■■■□ 21
UBR4-202ENST00000375224 PAK2Q13177 524 aa8.81□□□□□ -1
UBR4-202ENST00000375224 TARBP2Q15633 366 aaKnown RBP8.81□□□□□ -1
UBR4-202ENST00000375224 IER5Q5VY09 327 aa8.81□□□□□ -1
UBR4-202ENST00000375224 TAS1R3Q7RTX0 852 aa8.81□□□□□ -1
UBR4-202ENST00000375224 EIF1ADQ8N9N8 165 aaKnown RBP8.81□□□□□ -1
UBR4-202ENST00000375224 HELQQ8TDG4 1101 aa8.81□□□□□ -1
UBR4-202ENST00000375224 EPS8L1Q8TE68 723 aa8.81□□□□□ -1
UBR4-202ENST00000375224 CCDC102AQ96A19 550 aa8.81□□□□□ -1
UBR4-202ENST00000375224 TMEM143Q96AN5 459 aa8.81□□□□□ -1
UBR4-202ENST00000375224 L3MBTL3Q96JM7 780 aaPredicted RBP8.81□□□□□ -1
UBR4-202ENST00000375224 CABS1Q96KC9 395 aa8.81□□□□□ -1
UBR4-202ENST00000375224 KREMEN1Q96MU8 473 aa8.81□□□□□ -1
UBR4-202ENST00000375224 C1orf112Q9NSG2 853 aa8.81□□□□□ -1
UBR4-202ENST00000375224 EHD2Q9NZN4 543 aa8.81□□□□□ -1
UBR4-202ENST00000375224 DMGDHQ9UI17 866 aaKnown RBP8.81□□□□□ -1
UBR4-202ENST00000375224 MAFO75444 373 aaPredicted RBP8.81□□□□□ -1
UBR4-202ENST00000375224 CNMDO75829 334 aa8.81□□□□□ -1
UBR4-202ENST00000375224 ECEL1O95672 775 aa8.81□□□□□ -1
UBR4-202ENST00000375224 AP3M2P53677 418 aa8.81□□□□□ -1
UBR4-202ENST00000375224 PRPF4BQ13523 1007 aaKnown RBP8.81□□□□□ -1
UBR4-202ENST00000375224 C9orf131Q5VYM1 1079 aa8.81□□□□□ -1
UBR4-202ENST00000375224 SMYD5Q6GMV2 418 aa8.81□□□□□ -1
UBR4-202ENST00000375224 C11orf63Q6NUN7 778 aa8.81□□□□□ -1
UBR4-202ENST00000375224 ZNF677Q86XU0 584 aa8.81□□□□□ -1
UBR4-202ENST00000375224 METTL13Q8N6R0 699 aa8.81□□□□□ -1
UBR4-202ENST00000375224 ZNF483Q8TF39 744 aaPredicted RBP8.81□□□□□ -1
UBR4-202ENST00000375224 SCFD2Q8WU76 684 aa8.81□□□□□ -1
UBR4-202ENST00000375224 SEMA4DQ92854 862 aa8.81□□□□□ -1
UBR4-202ENST00000375224 TSPAN18Q96SJ8 248 aa8.81□□□□□ -1
UBR4-202ENST00000375224 KRT12Q99456 494 aa8.81□□□□□ -1
UBR4-202ENST00000375224 MMP19Q99542 508 aa8.81□□□□□ -1
UBR4-202ENST00000375224 SUGCTQ9HAC7 445 aa8.81□□□□□ -1
UBR4-202ENST00000375224 GDF3Q9NR23 364 aa8.81□□□□□ -1
UBR4-202ENST00000375224 SMARCAL1Q9NZC9 954 aa8.81□□□□□ -1
UBR4-202ENST00000375224 CTTNBP2NLQ9P2B4 639 aa8.81□□□□□ -1
UBR4-202ENST00000375224 CHUKO15111 745 aa8.8□□□□□ -1
UBR4-202ENST00000375224 BUB1BO60566 1050 aaPredicted RBP8.8□□□□□ -1
UBR4-202ENST00000375224 ZMYND10O75800 440 aa8.8□□□□□ -1
UBR4-202ENST00000375224 MTA2O94776 668 aa8.8□□□□□ -1
UBR4-202ENST00000375224 TNNI1P19237 187 aa8.8□□□□□ -1
UBR4-202ENST00000375224 TCF7P36402 384 aaPredicted RBP8.8□□□□□ -1
UBR4-202ENST00000375224 SLC26A2P50443 739 aa8.8□□□□□ -1
UBR4-202ENST00000375224 RPS6KA3P51812 740 aa8.8□□□□□ -1
UBR4-202ENST00000375224 CDR2Q01850 454 aa8.8□□□□□ -1
UBR4-202ENST00000375224 ZPBP2Q6X784 338 aa8.8□□□□□ -1
UBR4-202ENST00000375224 PLPPR4Q7Z2D5 763 aa8.8□□□□□ -1
UBR4-202ENST00000375224 UBL4BQ8N7F7 174 aa8.8□□□□□ -1
UBR4-202ENST00000375224 SHCBP1Q8NEM2 672 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms