RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 TMEM47Q9BQJ4 181 aa20.86■□□□□ 0.93
COL15A1-201ENST00000375001 UTP6Q9NYH9 597 aaKnown RBP20.86■□□□□ 0.93
COL15A1-201ENST00000375001 STRNO43815 780 aa20.86■□□□□ 0.93
COL15A1-201ENST00000375001 GRK2P25098 689 aa20.86■□□□□ 0.93
COL15A1-201ENST00000375001 KCNJ6P48051 423 aa20.86■□□□□ 0.93
COL15A1-201ENST00000375001 DSG1Q02413 1049 aa20.86■□□□□ 0.93
COL15A1-201ENST00000375001 KPNB1Q14974 876 aaKnown RBP20.86■□□□□ 0.93
COL15A1-201ENST00000375001 KRT72Q14CN4 511 aa20.86■□□□□ 0.93
COL15A1-201ENST00000375001 RCN1Q15293 331 aa20.86■□□□□ 0.93
COL15A1-201ENST00000375001 LRRC31Q6UY01 552 aa20.86■□□□□ 0.93
COL15A1-201ENST00000375001 RAD54LQ92698 747 aa20.86■□□□□ 0.93
COL15A1-201ENST00000375001 LOC100653049A0A140TA62 436 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 CLRN2A0PK11 232 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 KRT34O76011 436 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 SRGAP2CP0DJJ0 459 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 COASYQ13057 564 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 KYNUQ16719 465 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 SYCP2LQ5T4T6 812 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 RBM12Q9NTZ6 932 aaKnown RBP20.85■□□□□ 0.93
COL15A1-201ENST00000375001 ZFATQ9P243 1243 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 IP6K2Q9UHH9 426 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 USP17L5A8MUK1 530 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 SKAP2O75563 359 aaPredicted RBP20.85■□□□□ 0.93
COL15A1-201ENST00000375001 FCER1AP12319 257 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 DMPKQ09013 629 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 TMC5Q6UXY8 1006 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 ATL2Q8NHH9 583 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 SH3RF3Q8TEJ3 882 aaPredicted RBP20.85■□□□□ 0.93
COL15A1-201ENST00000375001 PDCD6IPQ8WUM4 868 aaKnown RBP20.85■□□□□ 0.93
COL15A1-201ENST00000375001 CLMNQ96JQ2 1002 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 RBM15Q96T37 977 aaKnown RBP eCLIP20.85■□□□□ 0.93
COL15A1-201ENST00000375001 EML4Q9HC35 981 aaKnown RBP20.85■□□□□ 0.93
COL15A1-201ENST00000375001 WDR17Q8IZU2 1322 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 A0A1B0GTH6 734 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 PVALEFA0A1B0GWK0 134 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 A0A1W2PQC6 194 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 Q3C1V9 767 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 C6orf10Q5SRN2 563 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 SYDE2Q5VT97 1194 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 IFT43Q96FT9 208 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 NSL1Q96IY1 281 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 PAPOLBQ9NRJ5 636 aaKnown RBP20.85■□□□□ 0.93
COL15A1-201ENST00000375001 E5RI56 91 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 C1orf228Q6PIY5 440 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 XXYLT1Q8NBI6 393 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 GPR101Q96P66 508 aaPredicted RBP20.85■□□□□ 0.93
COL15A1-201ENST00000375001 MRPS26Q9BYN8 205 aaKnown RBP20.85■□□□□ 0.93
COL15A1-201ENST00000375001 ZNF212Q9UDV6 495 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 MTO1Q9Y2Z2 717 aaKnown RBP20.85■□□□□ 0.93
COL15A1-201ENST00000375001 PREX2Q70Z35 1606 aa20.85■□□□□ 0.93
COL15A1-201ENST00000375001 KRT7P08729 469 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 TARSP26639 723 aaKnown RBP20.84■□□□□ 0.93
COL15A1-201ENST00000375001 PRDX5P30044 214 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 CCDC81Q6ZN84 652 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 APLFQ8IW19 511 aaPredicted RBP20.84■□□□□ 0.93
COL15A1-201ENST00000375001 THNSL1Q8IYQ7 743 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 OR6P1Q8NGX9 317 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 INTS2Q9H0H0 1204 aaKnown RBP20.84■□□□□ 0.93
COL15A1-201ENST00000375001 TMEM260Q9NX78 707 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 SYBUQ9NX95 663 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 TRIM10Q9UDY6 481 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 PNPLA6Q8IY17 1366 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 GSG1L2A8MUP6 293 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 CAND2O75155 1236 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 KRT33BQ14525 404 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 PRPF39Q86UA1 669 aaKnown RBP20.84■□□□□ 0.93
COL15A1-201ENST00000375001 MAGEB5Q9BZ81 275 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 F8W8V4 182 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 KLHL2O95198 593 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 GRIN1Q05586 938 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 COBLL1Q53SF7 1204 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 SGMS1Q86VZ5 419 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 MDM1Q8TC05 714 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 AIPL1Q9NZN9 384 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 TAF6LQ9Y6J9 622 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 LRRIQ3A6PVS8 624 aaPredicted RBP20.84■□□□□ 0.93
COL15A1-201ENST00000375001 FXR1P51114 621 aaKnown RBP eCLIP20.84■□□□□ 0.93
COL15A1-201ENST00000375001 NMD3Q96D46 503 aaKnown RBP20.84■□□□□ 0.93
COL15A1-201ENST00000375001 TMEM161AQ9NX61 479 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 DGKIO75912 1065 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 OSBPP22059 807 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 ABCE1P61221 599 aaKnown RBP20.84■□□□□ 0.93
COL15A1-201ENST00000375001 CMTM5Q96DZ9 223 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 ITM2BQ9Y287 266 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 CSADQ9Y600 493 aa20.84■□□□□ 0.93
COL15A1-201ENST00000375001 LINC00854A0A1B0GVQ3 168 aa20.83■□□□□ 0.93
COL15A1-201ENST00000375001 ZNF786Q8N393 782 aa20.83■□□□□ 0.93
COL15A1-201ENST00000375001 SLC44A5Q8NCS7 719 aa20.83■□□□□ 0.93
COL15A1-201ENST00000375001 SLC5A4Q9NY91 659 aa20.83■□□□□ 0.93
COL15A1-201ENST00000375001 SLFN12LQ6IEE8 588 aa20.83■□□□□ 0.93
COL15A1-201ENST00000375001 LCMT1Q9UIC8 334 aa20.83■□□□□ 0.93
COL15A1-201ENST00000375001 CLTCL1P53675 1640 aa20.83■□□□□ 0.93
COL15A1-201ENST00000375001 FAM205CA6NFA0 338 aa20.83■□□□□ 0.92
COL15A1-201ENST00000375001 SDC4P31431 198 aa20.83■□□□□ 0.92
COL15A1-201ENST00000375001 ATP2C1P98194 919 aaPredicted RBP20.83■□□□□ 0.92
COL15A1-201ENST00000375001 ANO4Q32M45 955 aa20.83■□□□□ 0.92
COL15A1-201ENST00000375001 RAD9BQ6WBX8 426 aa20.83■□□□□ 0.92
COL15A1-201ENST00000375001 TC2NQ8N9U0 490 aa20.83■□□□□ 0.92
COL15A1-201ENST00000375001 NOA1Q8NC60 698 aaKnown RBP20.83■□□□□ 0.92
COL15A1-201ENST00000375001 PCDHGB4Q9UN71 923 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms