RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 L1TD1Q5T7N2 865 aaKnown RBP13.12□□□□□ -0.31
HDAC8-201ENST00000373554 SLFN12LQ6IEE8 588 aa13.12□□□□□ -0.31
HDAC8-201ENST00000373554 RBM23Q86U06 439 aaKnown RBP13.12□□□□□ -0.31
HDAC8-201ENST00000373554 SYCP3Q8IZU3 236 aa13.12□□□□□ -0.31
HDAC8-201ENST00000373554 FSIP1Q8NA03 581 aa13.12□□□□□ -0.31
HDAC8-201ENST00000373554 TMEM87AQ8NBN3 555 aa13.12□□□□□ -0.31
HDAC8-201ENST00000373554 ACCSQ96QU6 501 aa13.12□□□□□ -0.31
HDAC8-201ENST00000373554 CDCA3Q99618 268 aaPredicted RBP13.12□□□□□ -0.31
HDAC8-201ENST00000373554 MSTO1Q9BUK6 570 aa13.12□□□□□ -0.31
HDAC8-201ENST00000373554 ZBP1Q9H171 429 aa13.12□□□□□ -0.31
HDAC8-201ENST00000373554 BLZF1Q9H2G9 400 aa13.12□□□□□ -0.31
HDAC8-201ENST00000373554 IGFLR1Q9H665 355 aa13.12□□□□□ -0.31
HDAC8-201ENST00000373554 SLC38A7Q9NVC3 462 aa13.12□□□□□ -0.31
HDAC8-201ENST00000373554 CLDND1Q9NY35 253 aa13.12□□□□□ -0.31
HDAC8-201ENST00000373554 SERTAD1Q9UHV2 236 aa13.12□□□□□ -0.31
HDAC8-201ENST00000373554 HPSEQ9Y251 543 aa13.12□□□□□ -0.31
HDAC8-201ENST00000373554 A0A0B4J269 797 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 FAM237AA0A1B0GTK4 181 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 SMIM28A0A1B0GU29 152 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.11□□□□□ -0.31
HDAC8-201ENST00000373554 URODP06132 367 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 SRGAP2BP0DMP2 458 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 CXCL8P10145 99 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 CTSAP10619 480 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 KCNA5P22460 613 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 CASP5P51878 434 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 NDUFA8P51970 172 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 TFF2Q03403 129 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 MAPK8IP2Q13387 824 aaPredicted RBP13.11□□□□□ -0.31
HDAC8-201ENST00000373554 COL19A1Q14993 1142 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 NAB2Q15742 525 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 XKR4Q5GH76 650 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 FAM26FQ5R3K3 315 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 SLC39A4Q6P5W5 647 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 UNC13DQ70J99 1090 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 EFHBQ8N7U6 833 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 POMGNT1Q8WZA1 660 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 CCDC34Q96HJ3 373 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 UROC1Q96N76 676 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 ASB2Q96Q27 587 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 PPP1R10Q96QC0 940 aaKnown RBP13.11□□□□□ -0.31
HDAC8-201ENST00000373554 STRA6Q9BX79 667 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 HAPLN2Q9GZV7 340 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 CXCL16Q9H2A7 254 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 TMEM206Q9H813 350 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 PLEKHA5Q9HAU0 1116 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 CNTN3Q9P232 1028 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 CACNG4Q9UBN1 327 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 ADAM28Q9UKQ2 775 aa13.11□□□□□ -0.31
HDAC8-201ENST00000373554 SF3B1O75533 1304 aaKnown RBP eCLIP13.11□□□□□ -0.311e-8■■■■■ 103.4
HDAC8-201ENST00000373554 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.1□□□□□ -0.31
HDAC8-201ENST00000373554 PVALEFA0A1B0GWK0 134 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 HIDE1A8MVS5 230 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 ANKRD63C9JTQ0 380 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 TADA2AO75478 443 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 CXCL14O95715 111 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 SOD2P04179 222 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 MYL1P05976 194 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 KCNE1P15382 129 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 CASP1P29466 404 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 GTF2F1P35269 517 aaKnown RBP eCLIP13.1□□□□□ -0.31
HDAC8-201ENST00000373554 PLA2G5P39877 138 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 NDUFV1P49821 464 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 PPP2R3AQ06190 1150 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 KCNA1Q09470 495 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 CUL4BQ13620 913 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 POSTNQ15063 836 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 DUSP6Q16828 381 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 CTC1Q2NKJ3 1217 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 SLC10A6Q3KNW5 377 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 TJAP1Q5JTD0 557 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 FUT10Q6P4F1 479 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 ALKAL1Q6UXT8 129 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 GRAMD1CQ8IYS0 662 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 MRPL43Q8N983 215 aaKnown RBP13.1□□□□□ -0.31
HDAC8-201ENST00000373554 RABGGTAQ92696 567 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 HPS3Q969F9 1004 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 PAGE5Q96GU1 130 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 PAAF1Q9BRP4 392 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 HERC2P3Q9BVR0 1158 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 VN1R3Q9BXE9 311 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 RPF1Q9H9Y2 349 aaKnown RBP13.1□□□□□ -0.31
HDAC8-201ENST00000373554 MRPL17Q9NRX2 175 aaKnown RBP13.1□□□□□ -0.31
HDAC8-201ENST00000373554 AGO2Q9UKV8 859 aaKnown RBP13.1□□□□□ -0.31
HDAC8-201ENST00000373554 SSX2IPQ9Y2D8 614 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.1□□□□□ -0.31
HDAC8-201ENST00000373554 IRAK3Q9Y616 596 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 STYXL1Q9Y6J8 313 aa13.1□□□□□ -0.31
HDAC8-201ENST00000373554 TCHHQ07283 1943 aa13.09□□□□□ -0.31
HDAC8-201ENST00000373554 PRUNE2Q8WUY3 3088 aa13.09□□□□□ -0.31
HDAC8-201ENST00000373554 C2orf71A6NGG8 1288 aa13.09□□□□□ -0.31
HDAC8-201ENST00000373554 TISP43B9A030 160 aa13.09□□□□□ -0.31
HDAC8-201ENST00000373554 F8W810 466 aa13.09□□□□□ -0.31
HDAC8-201ENST00000373554 PER2O15055 1255 aa13.09□□□□□ -0.31
HDAC8-201ENST00000373554 EIF3DO15371 548 aaKnown RBP eCLIP13.09□□□□□ -0.31
HDAC8-201ENST00000373554 LINC01565O15544 149 aa13.09□□□□□ -0.31
HDAC8-201ENST00000373554 FAM189A1O60320 539 aa13.09□□□□□ -0.31
HDAC8-201ENST00000373554 TBX10O75333 385 aa13.09□□□□□ -0.31
HDAC8-201ENST00000373554 PRPF6O94906 941 aaKnown RBP13.09□□□□□ -0.31
HDAC8-201ENST00000373554 KIF4AO95239 1232 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms