RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 TMEM143Q96AN5 459 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 ISCUQ9H1K1 167 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 KLHL8Q9P2G9 620 aaPredicted RBP11.54□□□□□ -0.56
CSMD2-204ENST00000373380 HERC5Q9UII4 1024 aaKnown RBP11.54□□□□□ -0.56
CSMD2-204ENST00000373380 PIK3R2O00459 728 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 PHF2O75151 1096 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 CDH16O75309 829 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 KRT7P08729 469 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 SDC4P31431 198 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 HSD17B3P37058 310 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 NOP14P78316 857 aaKnown RBP11.53□□□□□ -0.56
CSMD2-204ENST00000373380 PHEXP78562 749 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 CDR2Q01850 454 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 KLHL38Q2WGJ6 581 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 WDR72Q3MJ13 1102 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 ATP11CQ8NB49 1132 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 CASKIN2Q8WXE0 1202 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 PI4K2AQ9BTU6 479 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 TRABDQ9H4I3 376 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 NYAP2Q9P242 653 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 EPS15L1Q9UBC2 864 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 STOML1Q9UBI4 398 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 STRIP2Q9ULQ0 834 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 TBX3O15119 743 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 GGPS1O95749 300 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 C1orf228Q6PIY5 440 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 LRRC31Q6UY01 552 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 SKA2Q8WVK7 121 aaPredicted RBP11.53□□□□□ -0.56
CSMD2-204ENST00000373380 FAM161BQ96MY7 647 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 NUDCD1Q96RS6 583 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 SH3GL3Q99963 347 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 APOBEC2Q9Y235 224 aaKnown RBP11.53□□□□□ -0.56
CSMD2-204ENST00000373380 ESYT2A0FGR8 921 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 SMIM22K7EJ46 135 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 MGEA5O60502 916 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 LPXNO60711 386 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 SRGAP2BP0DMP2 458 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 RAD23BP54727 409 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 BAATQ14032 418 aaPredicted RBP11.53□□□□□ -0.56
CSMD2-204ENST00000373380 PAPD7Q5XG87 772 aaKnown RBP11.53□□□□□ -0.56
CSMD2-204ENST00000373380 CENPPQ6IPU0 288 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 ENOSF1Q7L5Y1 443 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 RUBCNQ92622 972 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 ATP6V1E2Q96A05 226 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 KLF6Q99612 283 aaPredicted RBP11.53□□□□□ -0.56
CSMD2-204ENST00000373380 CYP4F11Q9HBI6 524 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 FGFR1OP2Q9NVK5 253 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 ANGPTL2Q9UKU9 493 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 DNAJC8O75937 253 aaPredicted RBP11.53□□□□□ -0.56
CSMD2-204ENST00000373380 ATP5HO75947 161 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 TMEM253P0C7T8 217 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 HIF1AQ16665 826 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 DUOXA2Q1HG44 320 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 P3H1Q32P28 736 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 MUM1L1Q5H9M0 696 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 SPOUT1Q5T280 376 aaKnown RBP11.53□□□□□ -0.56
CSMD2-204ENST00000373380 C1orf146Q5VVC0 180 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 RWDD4Q6NW29 188 aaKnown RBP11.53□□□□□ -0.56
CSMD2-204ENST00000373380 KIF2BQ8N4N8 673 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 FAM193BQ96PV7 902 aaPredicted RBP11.53□□□□□ -0.56
CSMD2-204ENST00000373380 THAP2Q9H0W7 228 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 HOXC10Q9NYD6 342 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 SLC4A7Q9Y6M7 1214 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 SALL1Q9NSC2 1324 aa11.53□□□□□ -0.56
CSMD2-204ENST00000373380 ZSCAN5CA6NGD5 496 aaPredicted RBP11.52□□□□□ -0.56
CSMD2-204ENST00000373380 FOXN3O00409 490 aaPredicted RBP11.52□□□□□ -0.56
CSMD2-204ENST00000373380 MED24O75448 989 aa11.52□□□□□ -0.56
CSMD2-204ENST00000373380 SASH3O75995 380 aa11.52□□□□□ -0.56
CSMD2-204ENST00000373380 SARSP49591 514 aaKnown RBP11.52□□□□□ -0.56
CSMD2-204ENST00000373380 GPC3P51654 580 aa11.52□□□□□ -0.56
CSMD2-204ENST00000373380 STAT4Q14765 748 aa11.52□□□□□ -0.56
CSMD2-204ENST00000373380 C2CD6Q53TS8 623 aa11.52□□□□□ -0.56
CSMD2-204ENST00000373380 ARMCX2Q7L311 632 aa11.52□□□□□ -0.56
CSMD2-204ENST00000373380 NUDCD3Q8IVD9 361 aa11.52□□□□□ -0.56
CSMD2-204ENST00000373380 TPCN2Q8NHX9 752 aa11.52□□□□□ -0.56
CSMD2-204ENST00000373380 CCDC124Q96CT7 223 aaKnown RBP11.52□□□□□ -0.56
CSMD2-204ENST00000373380 PARVAQ9NVD7 372 aa11.52□□□□□ -0.56
CSMD2-204ENST00000373380 UVRAGQ9P2Y5 699 aa11.52□□□□□ -0.56
CSMD2-204ENST00000373380 PITPNM2Q9BZ72 1349 aa11.52□□□□□ -0.56
CSMD2-204ENST00000373380 TMEM120BA0PK00 339 aa11.52□□□□□ -0.57
CSMD2-204ENST00000373380 TTC4O95801 387 aa11.52□□□□□ -0.57
CSMD2-204ENST00000373380 IL1RL1Q01638 556 aa11.52□□□□□ -0.57
CSMD2-204ENST00000373380 LRIG3Q6UXM1 1119 aa11.52□□□□□ -0.57
CSMD2-204ENST00000373380 RNF149Q8NC42 400 aa11.52□□□□□ -0.57
CSMD2-204ENST00000373380 EXT2Q93063 718 aa11.52□□□□□ -0.57
CSMD2-204ENST00000373380 CALR3Q96L12 384 aaKnown RBP11.52□□□□□ -0.57
CSMD2-204ENST00000373380 ARL2BPQ9Y2Y0 163 aa11.52□□□□□ -0.57
CSMD2-204ENST00000373380 SUGT1Q9Y2Z0 365 aa11.52□□□□□ -0.57
CSMD2-204ENST00000373380 TCHHQ07283 1943 aa11.52□□□□□ -0.57
CSMD2-204ENST00000373380 TCRBV5S4A2TA0A5A2 114 aa11.52□□□□□ -0.57
CSMD2-204ENST00000373380 DIAPH2O60879 1101 aa11.52□□□□□ -0.57
CSMD2-204ENST00000373380 FAM107AO95990 144 aa11.52□□□□□ -0.57
CSMD2-204ENST00000373380 KRT3P12035 628 aa11.52□□□□□ -0.57
CSMD2-204ENST00000373380 HMGCS2P54868 508 aa11.52□□□□□ -0.57
CSMD2-204ENST00000373380 CORO7P57737 925 aa11.52□□□□□ -0.57
CSMD2-204ENST00000373380 PPP4CP60510 307 aa11.52□□□□□ -0.57
CSMD2-204ENST00000373380 PTGISQ16647 500 aa11.52□□□□□ -0.57
CSMD2-204ENST00000373380 INTS5Q6P9B9 1019 aaKnown RBP11.52□□□□□ -0.57
CSMD2-204ENST00000373380 HDAC7Q8WUI4 952 aa11.52□□□□□ -0.57
CSMD2-204ENST00000373380 MTMR8Q96EF0 704 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms