RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 NDUFAF2Q8N183 169 aa25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 ALDH8A1Q9H2A2 487 aaPredicted RBP25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 STX18Q9P2W9 335 aaKnown RBP25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 TMEM247A6NEH6 219 aa25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 NBPF26B4DH59 902 aa25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 DEUP1Q05D60 604 aa25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 TTLL4Q14679 1199 aa25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 NBPF10Q6P3W6 841 aaKnown RBP25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 NBPF15Q8N660 670 aa25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 C9orf72Q96LT7 481 aa25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 STAP1Q9ULZ2 295 aa25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 ZNF711Q9Y462 761 aa25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 CCDC85BQ15834 202 aaPredicted RBP25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 CAPRIN2Q6IMN6 1127 aaKnown RBP25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 DDX42Q86XP3 938 aaKnown RBP eCLIP25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 PIM2Q9P1W9 311 aa25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 TRAF3IP3Q9Y228 551 aa25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 LRRC7Q96NW7 1537 aa25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 RMDN1Q96DB5 314 aa25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 MYMKA6NI61 221 aa25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 NR1I3Q14994 352 aa25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 IGDCC4Q8TDY8 1250 aa25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 TMA16Q96EY4 203 aaKnown RBP25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 KLF6Q99612 283 aaPredicted RBP25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 SEL1LQ9UBV2 794 aa25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 XPO7Q9UIA9 1087 aaKnown RBP25.26■■□□□ 1.63
RAPGEF1-203ENST00000372195 KCNA2P16389 499 aa25.25■■□□□ 1.63
RAPGEF1-203ENST00000372195 HLA-DPA1P20036 260 aa25.25■■□□□ 1.63
RAPGEF1-203ENST00000372195 RECQLP46063 649 aaPredicted RBP25.25■■□□□ 1.63
RAPGEF1-203ENST00000372195 USP11P51784 963 aa25.25■■□□□ 1.63
RAPGEF1-203ENST00000372195 CALR3Q96L12 384 aaKnown RBP25.25■■□□□ 1.63
RAPGEF1-203ENST00000372195 POLR1AO95602 1720 aaPredicted RBP25.25■■□□□ 1.63
RAPGEF1-203ENST00000372195 MTMR2Q13614 643 aa25.25■■□□□ 1.63
RAPGEF1-203ENST00000372195 NUP93Q8N1F7 819 aa25.25■■□□□ 1.63
RAPGEF1-203ENST00000372195 ASAP2O43150 1006 aa25.25■■□□□ 1.63
RAPGEF1-203ENST00000372195 RAD51CO43502 376 aa25.25■■□□□ 1.63
RAPGEF1-203ENST00000372195 SRGNP10124 158 aa25.25■■□□□ 1.63
RAPGEF1-203ENST00000372195 APEX2Q9UBZ4 518 aa25.25■■□□□ 1.63
RAPGEF1-203ENST00000372195 PHF2O75151 1096 aa25.25■■□□□ 1.63
RAPGEF1-203ENST00000372195 KCNB1Q14721 858 aa25.25■■□□□ 1.63
RAPGEF1-203ENST00000372195 SRLQ86TD4 932 aa25.25■■□□□ 1.63
RAPGEF1-203ENST00000372195 C2orf40Q9H1Z8 148 aa25.25■■□□□ 1.63
RAPGEF1-203ENST00000372195 ZSCAN9O15535 394 aaPredicted RBP25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 STK4Q13043 487 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 DUOXA2Q1HG44 320 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 C12orf60Q5U649 245 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 KIF2BQ8N4N8 673 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 OTULINQ96BN8 352 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 NSUN4Q96CB9 384 aaKnown RBP25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 APRTP07741 180 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 TMEM62Q0P6H9 643 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 EPC2Q52LR7 807 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 EHD2Q9NZN4 543 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 TEKT2Q9UIF3 430 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 LZTS1Q9Y250 596 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 ORC4O43929 436 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 GGPS1O95749 300 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 SYF2O95926 243 aaKnown RBP25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 SLC9A1P19634 815 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 SLC18A3Q16572 532 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 WDR72Q3MJ13 1102 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 ATL2Q8NHH9 583 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 PRPF4O43172 522 aaKnown RBP eCLIP25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 GNAT1P11488 350 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 PLA2G4FQ68DD2 849 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 ACSF2Q96CM8 615 aaPredicted RBP25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 ANO5Q75V66 913 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 ADSSL1Q8N142 457 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 KIFC3Q9BVG8 833 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 PCMTD2Q9NV79 361 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 ADGRL3Q9HAR2 1447 aa25.24■■□□□ 1.63
RAPGEF1-203ENST00000372195 HMBSP08397 361 aa25.23■■□□□ 1.63
RAPGEF1-203ENST00000372195 RCAN1P53805 252 aa25.23■■□□□ 1.63
RAPGEF1-203ENST00000372195 RASGRP2Q7LDG7 609 aa25.23■■□□□ 1.63
RAPGEF1-203ENST00000372195 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.23■■□□□ 1.63
RAPGEF1-203ENST00000372195 CLTCL1P53675 1640 aa25.23■■□□□ 1.63
RAPGEF1-203ENST00000372195 PRKCBP05771 671 aa25.23■■□□□ 1.63
RAPGEF1-203ENST00000372195 GRIK1P39086 918 aa25.23■■□□□ 1.63
RAPGEF1-203ENST00000372195 ASIC4Q96FT7 647 aa25.23■■□□□ 1.63
RAPGEF1-203ENST00000372195 BFARQ9NZS9 450 aa25.23■■□□□ 1.63
RAPGEF1-203ENST00000372195 HMGCS2P54868 508 aa25.23■■□□□ 1.63
RAPGEF1-203ENST00000372195 SMTNL2Q2TAL5 461 aa25.23■■□□□ 1.63
RAPGEF1-203ENST00000372195 RFX7Q2KHR2 1363 aa25.23■■□□□ 1.63
RAPGEF1-203ENST00000372195 PDGFRBP09619 1106 aa25.23■■□□□ 1.63
RAPGEF1-203ENST00000372195 GRIN1Q05586 938 aa25.23■■□□□ 1.63
RAPGEF1-203ENST00000372195 HIC1Q14526 733 aa25.23■■□□□ 1.63
RAPGEF1-203ENST00000372195 ZC3H12BQ5HYM0 836 aaKnown RBP25.23■■□□□ 1.63
RAPGEF1-203ENST00000372195 NAF1Q96HR8 494 aaKnown RBP25.23■■□□□ 1.63
RAPGEF1-203ENST00000372195 ACAD9Q9H845 621 aa25.23■■□□□ 1.63
RAPGEF1-203ENST00000372195 ZKSCAN7Q9P0L1 754 aaPredicted RBP25.23■■□□□ 1.63
RAPGEF1-203ENST00000372195 GLI2P10070 1586 aa25.22■■□□□ 1.63
RAPGEF1-203ENST00000372195 TCN1P20061 433 aaPredicted RBP25.22■■□□□ 1.63
RAPGEF1-203ENST00000372195 BTBD8Q5XKL5 378 aa25.22■■□□□ 1.63
RAPGEF1-203ENST00000372195 TAGAPQ8N103 731 aa25.22■■□□□ 1.63
RAPGEF1-203ENST00000372195 ZNF710Q8N1W2 664 aa25.22■■□□□ 1.63
RAPGEF1-203ENST00000372195 NR1H4Q96RI1 486 aaPredicted RBP25.22■■□□□ 1.63
RAPGEF1-203ENST00000372195 CCT8L2Q96SF2 557 aa25.22■■□□□ 1.63
RAPGEF1-203ENST00000372195 PI4K2AQ9BTU6 479 aa25.22■■□□□ 1.63
RAPGEF1-203ENST00000372195 MAGEB5Q9BZ81 275 aa25.22■■□□□ 1.63
RAPGEF1-203ENST00000372195 NIPSNAP3AQ9UFN0 247 aaPredicted RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms