RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 FCGRTP55899 365 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 EPHA7Q15375 998 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 VPS72Q15906 364 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 RAB42Q8N4Z0 105 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 PPHLN1Q8NEY8 458 aaKnown RBP9.03□□□□□ -0.96
ABCA4-201ENST00000370225 MYO1DO94832 1006 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 CYP2C9P11712 490 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 ALDH1A3P47895 512 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 CUL1Q13616 776 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 ZC2HC1CQ53FD0 456 aaPredicted RBP9.03□□□□□ -0.96
ABCA4-201ENST00000370225 MDH1BQ5I0G3 518 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 CDKL3Q8IVW4 592 aaPredicted RBP9.03□□□□□ -0.96
ABCA4-201ENST00000370225 SLC7A14Q8TBB6 771 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 MCEEQ96PE7 176 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 ABI2Q9NYB9 513 aaPredicted RBP9.03□□□□□ -0.96
ABCA4-201ENST00000370225 PRR12Q9ULL5 1215 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 LRRC14Q15048 493 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 GLRA4Q5JXX5 417 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 SDE2Q6IQ49 451 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 SPATS2Q86XZ4 545 aaKnown RBP9.03□□□□□ -0.96
ABCA4-201ENST00000370225 ATPAF2Q8N5M1 289 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 SYT2Q8N9I0 419 aaPredicted RBP9.03□□□□□ -0.96
ABCA4-201ENST00000370225 CRAMP1Q96RY5 1269 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 EPAS1Q99814 870 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 ALKQ9UM73 1620 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 C19orf81C9J6K1 198 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 SLC8A1P32418 973 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 MORF4L2Q15014 288 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 ZC3H12BQ5HYM0 836 aaKnown RBP9.03□□□□□ -0.96
ABCA4-201ENST00000370225 SH3TC2Q8TF17 1288 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 ABHD8Q96I13 439 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 KIFC3Q9BVG8 833 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 DDX47Q9H0S4 455 aaKnown RBP9.03□□□□□ -0.96
ABCA4-201ENST00000370225 CNOT10Q9H9A5 744 aaKnown RBP9.03□□□□□ -0.96
ABCA4-201ENST00000370225 WEE2P0C1S8 567 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 YY1P25490 414 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 EEF1DP29692 281 aaKnown RBP9.03□□□□□ -0.96
ABCA4-201ENST00000370225 SEZ6Q53EL9 994 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 RGS9BPQ6ZS82 235 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 WDR75Q8IWA0 830 aaKnown RBP9.03□□□□□ -0.96
ABCA4-201ENST00000370225 NEDD1Q8NHV4 660 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 REEP2Q9BRK0 252 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 UNC45AQ9H3U1 944 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 CYP4F11Q9HBI6 524 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 DDX56Q9NY93 547 aaKnown RBP9.03□□□□□ -0.96
ABCA4-201ENST00000370225 TEX33O43247 280 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 CTIFO43310 598 aaKnown RBP9.03□□□□□ -0.96
ABCA4-201ENST00000370225 EYA4O95677 639 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 PYGLP06737 847 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 SETSIPP0DME0 302 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 HLA-DPA1P20036 260 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 CPT1AP50416 773 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 TADA2BQ86TJ2 420 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 TUFT1Q9NNX1 390 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 RNF14Q9UBS8 474 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 SEL1LQ9UBV2 794 aa9.03□□□□□ -0.96
ABCA4-201ENST00000370225 CEP152O94986 1710 aa9.02□□□□□ -0.96
ABCA4-201ENST00000370225 FAM47DPA6NHR8 397 aa9.02□□□□□ -0.96
ABCA4-201ENST00000370225 H0Y3Z8 333 aa9.02□□□□□ -0.96
ABCA4-201ENST00000370225 LRG1P02750 347 aa9.02□□□□□ -0.96
ABCA4-201ENST00000370225 PMS2P54278 862 aa9.02□□□□□ -0.96
ABCA4-201ENST00000370225 ORC1Q13415 861 aa9.02□□□□□ -0.96
ABCA4-201ENST00000370225 PDAP1Q13442 181 aaKnown RBP9.02□□□□□ -0.96
ABCA4-201ENST00000370225 MTM1Q13496 603 aa9.02□□□□□ -0.96
ABCA4-201ENST00000370225 NCOA4Q13772 614 aa9.02□□□□□ -0.96
ABCA4-201ENST00000370225 ARHGEF7Q14155 803 aa9.02□□□□□ -0.96
ABCA4-201ENST00000370225 EFTUD2Q15029 972 aaKnown RBP eCLIP9.02□□□□□ -0.96
ABCA4-201ENST00000370225 C10orf120Q5SQS8 335 aa9.02□□□□□ -0.96
ABCA4-201ENST00000370225 BEND6Q5SZJ8 279 aaPredicted RBP9.02□□□□□ -0.96
ABCA4-201ENST00000370225 GLB1LQ6UWU2 654 aa9.02□□□□□ -0.96
ABCA4-201ENST00000370225 RNF180Q86T96 592 aa9.02□□□□□ -0.96
ABCA4-201ENST00000370225 HASPINQ8TF76 798 aa9.02□□□□□ -0.96
ABCA4-201ENST00000370225 PI4K2AQ9BTU6 479 aa9.02□□□□□ -0.96
ABCA4-201ENST00000370225 RRAGCQ9HB90 399 aa9.02□□□□□ -0.96
ABCA4-201ENST00000370225 TET3O43151 1660 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 CLTCL1P53675 1640 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 VGLL3A8MV65 326 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 PGK2P07205 417 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 GFAPP14136 432 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 MAP2K2P36507 400 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 ESRRGP62508 458 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 RBP5P82980 135 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 CASP8Q14790 479 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 NCAPHQ15003 741 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 MFSD4BQ5TF39 518 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 CCDC137Q6PK04 289 aaKnown RBP9.02□□□□□ -0.97
ABCA4-201ENST00000370225 RHOT1Q8IXI2 618 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 ELMO2Q96JJ3 720 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 SPATA31A1Q5TZJ5 1347 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 LAMC1P11047 1609 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 CLTCQ00610 1675 aaKnown RBP9.02□□□□□ -0.97
ABCA4-201ENST00000370225 FGFR4P22455 802 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 ALDH7A1P49419 539 aaKnown RBP9.02□□□□□ -0.97
ABCA4-201ENST00000370225 ZNF543Q08ER8 600 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 KYAT1Q16773 422 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 ATF7IP2Q5U623 682 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 C9orf131Q5VYM1 1079 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 STKLD1Q8NE28 680 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 FBXO41Q8TF61 875 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 ZFYVE19Q96K21 471 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms