RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 DNAJC18Q9H819 358 aa18.61■□□□□ 0.57
CHTOP-203ENST00000368690 NKX1-2Q9UD57 310 aaPredicted RBP18.61■□□□□ 0.57
CHTOP-203ENST00000368690 BRCA1P38398 1863 aaKnown RBP18.6■□□□□ 0.57
CHTOP-203ENST00000368690 ENO4A6NNW6 628 aa18.6■□□□□ 0.57
CHTOP-203ENST00000368690 FSCN2O14926 492 aa18.6■□□□□ 0.57
CHTOP-203ENST00000368690 MAPK13O15264 365 aa18.6■□□□□ 0.57
CHTOP-203ENST00000368690 DCTN3O75935 186 aa18.6■□□□□ 0.57
CHTOP-203ENST00000368690 GZMAP12544 262 aa18.6■□□□□ 0.57
CHTOP-203ENST00000368690 SLC18A1P54219 525 aa18.6■□□□□ 0.57
CHTOP-203ENST00000368690 CACNB3P54284 484 aa18.6■□□□□ 0.57
CHTOP-203ENST00000368690 APOBEC3HQ6NTF7 200 aaKnown RBP18.6■□□□□ 0.57
CHTOP-203ENST00000368690 CDC42EP5Q6NZY7 148 aa18.6■□□□□ 0.57
CHTOP-203ENST00000368690 RNF207Q6ZRF8 634 aa18.6■□□□□ 0.57
CHTOP-203ENST00000368690 LRRC47Q8N1G4 583 aaKnown RBP18.6■□□□□ 0.57
CHTOP-203ENST00000368690 ANKRD35Q8N283 1001 aa18.6■□□□□ 0.57
CHTOP-203ENST00000368690 ASAP3Q8TDY4 903 aa18.6■□□□□ 0.57
CHTOP-203ENST00000368690 ZFAND2BQ8WV99 257 aa18.6■□□□□ 0.57
CHTOP-203ENST00000368690 FAM167BQ9BTA0 163 aa18.6■□□□□ 0.57
CHTOP-203ENST00000368690 MYLK2Q9H1R3 596 aa18.6■□□□□ 0.57
CHTOP-203ENST00000368690 PTPN22Q9Y2R2 807 aa18.6■□□□□ 0.57
CHTOP-203ENST00000368690 ZBTB12Q9Y330 459 aaPredicted RBP18.6■□□□□ 0.57
CHTOP-203ENST00000368690 COL4A5P29400 1685 aa18.6■□□□□ 0.57
CHTOP-203ENST00000368690 DPPA5A6NC42 116 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 RSPH10B2B2RC85 870 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 GH1P01241 217 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 RSPH10BP0C881 870 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 CNGA1P29973 690 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 RAD23BP54727 409 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 NR1H3Q13133 447 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 PTK6Q13882 451 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 TSNAXIP1Q2TAA8 658 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 CBWD6Q4V339 395 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 CBWD3Q5JTY5 395 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 CBWD5Q5RIA9 395 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 MAIP1Q8WWC4 291 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 SEL1LQ9UBV2 794 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 ZNRF3Q9ULT6 936 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 FRMD4BQ9Y2L6 1034 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 TCRBV7S2A1N4TA0A589 114 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 FOXN3O00409 490 aaPredicted RBP18.59■□□□□ 0.57
CHTOP-203ENST00000368690 HNRNPCL1O60812 293 aaKnown RBP18.59■□□□□ 0.57
CHTOP-203ENST00000368690 GABPAQ06546 454 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 KCNA1Q09470 495 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 STAT4Q14765 748 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 NBPF20Q3BBV1 942 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 VSIG1Q86XK7 387 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 LMO3Q8TAP4 145 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 KCNV2Q8TDN2 545 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 PARD3BQ8TEW8 1205 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 ZDHHC15Q96MV8 337 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 TSC22D3Q99576 134 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 CCDC77Q9BR77 488 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 RUSC1Q9BVN2 902 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 UBN1Q9NPG3 1134 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 EURLQ9NYK6 297 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 CPSF2Q9P2I0 782 aaKnown RBP18.59■□□□□ 0.57
CHTOP-203ENST00000368690 ASB3Q9Y575 518 aa18.59■□□□□ 0.57
CHTOP-203ENST00000368690 MEIS1O00470 390 aa18.58■□□□□ 0.57
CHTOP-203ENST00000368690 SORBS3O60504 671 aa18.58■□□□□ 0.57
CHTOP-203ENST00000368690 IVDP26440 423 aa18.58■□□□□ 0.57
CHTOP-203ENST00000368690 ALDH3A1P30838 453 aa18.58■□□□□ 0.57
CHTOP-203ENST00000368690 PAPOLAP51003 745 aaKnown RBP18.58■□□□□ 0.57
CHTOP-203ENST00000368690 ROR2Q01974 943 aaKnown RBP18.58■□□□□ 0.57
CHTOP-203ENST00000368690 KRT17Q04695 432 aa18.58■□□□□ 0.57
CHTOP-203ENST00000368690 MYBPC2Q14324 1141 aa18.58■□□□□ 0.57
CHTOP-203ENST00000368690 MESDQ14696 234 aa18.58■□□□□ 0.57
CHTOP-203ENST00000368690 RSBN1LQ6PCB5 846 aaPredicted RBP18.58■□□□□ 0.57
CHTOP-203ENST00000368690 STXBP4Q6ZWJ1 553 aa18.58■□□□□ 0.57
CHTOP-203ENST00000368690 HS2ST1Q7LGA3 356 aa18.58■□□□□ 0.57
CHTOP-203ENST00000368690 FAM13CQ8NE31 585 aa18.58■□□□□ 0.57
CHTOP-203ENST00000368690 GRK7Q8WTQ7 553 aa18.58■□□□□ 0.57
CHTOP-203ENST00000368690 LRRC37BQ96QE4 947 aa18.58■□□□□ 0.57
CHTOP-203ENST00000368690 TLE6Q9H808 572 aa18.58■□□□□ 0.57
CHTOP-203ENST00000368690 DDX4Q9NQI0 724 aaKnown RBP18.58■□□□□ 0.57
CHTOP-203ENST00000368690 MROH7Q68CQ1 1323 aa18.58■□□□□ 0.57
CHTOP-203ENST00000368690 NFKBIEO00221 500 aa18.58■□□□□ 0.56
CHTOP-203ENST00000368690 MPHOSPH10O00566 681 aaKnown RBP18.58■□□□□ 0.56
CHTOP-203ENST00000368690 FOXN2P32314 431 aa18.58■□□□□ 0.56
CHTOP-203ENST00000368690 PCK1P35558 622 aa18.58■□□□□ 0.56
CHTOP-203ENST00000368690 MOGSQ13724 837 aa18.58■□□□□ 0.56
CHTOP-203ENST00000368690 CWF19L1Q69YN2 538 aaKnown RBP18.58■□□□□ 0.56
CHTOP-203ENST00000368690 PHLDB3Q6NSJ2 640 aa18.58■□□□□ 0.56
CHTOP-203ENST00000368690 CEP128Q6ZU80 1094 aa18.58■□□□□ 0.56
CHTOP-203ENST00000368690 SLC9A9Q8IVB4 645 aa18.58■□□□□ 0.56
CHTOP-203ENST00000368690 ZBTB10Q96DT7 871 aa18.58■□□□□ 0.56
CHTOP-203ENST00000368690 TRAIPQ9BWF2 469 aa18.58■□□□□ 0.56
CHTOP-203ENST00000368690 VPS33BQ9H267 617 aa18.58■□□□□ 0.56
CHTOP-203ENST00000368690 SERPINA10Q9UK55 444 aa18.58■□□□□ 0.56
CHTOP-203ENST00000368690 RABGAP1Q9Y3P9 1069 aa18.58■□□□□ 0.56
CHTOP-203ENST00000368690 FAM47DPA6NHR8 397 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 TMEM110-MUSTN1A8MSY1 372 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 USP17L10C9JJH3 530 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 P4HA2O15460 535 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 THAP12O43422 761 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 CYP1A2P05177 515 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 CHKAP35790 457 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 KCNJ1P48048 391 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 ARHGAP4P98171 946 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 KLC1Q07866 573 aa18.57■□□□□ 0.56
CHTOP-203ENST00000368690 TCP10Q12799 353 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms