RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 GCNT4Q9P109 453 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 DAAM1Q9Y4D1 1078 aa13.34□□□□□ -0.27
TUBE1-202ENST00000368662 CXCL8P10145 99 aa13.33□□□□□ -0.28
TUBE1-202ENST00000368662 SKIP12755 728 aa13.33□□□□□ -0.28
TUBE1-202ENST00000368662 TBX2Q13207 712 aaPredicted RBP13.33□□□□□ -0.28
TUBE1-202ENST00000368662 UBXN11Q5T124 520 aa13.33□□□□□ -0.28
TUBE1-202ENST00000368662 NEK11Q8NG66 645 aa13.33□□□□□ -0.28
TUBE1-202ENST00000368662 TSPAN18Q96SJ8 248 aa13.33□□□□□ -0.28
TUBE1-202ENST00000368662 IFIH1Q9BYX4 1025 aaKnown RBP13.33□□□□□ -0.28
TUBE1-202ENST00000368662 HIPK3Q9H422 1215 aa13.33□□□□□ -0.28
TUBE1-202ENST00000368662 PLCB1Q9NQ66 1216 aa13.33□□□□□ -0.28
TUBE1-202ENST00000368662 ATP11BQ9Y2G3 1177 aa13.33□□□□□ -0.28
TUBE1-202ENST00000368662 A0A1W2PQJ5 194 aa13.33□□□□□ -0.28
TUBE1-202ENST00000368662 TULP1O00294 542 aaPredicted RBP13.33□□□□□ -0.28
TUBE1-202ENST00000368662 KCNMA1Q12791 1236 aa13.33□□□□□ -0.28
TUBE1-202ENST00000368662 PTPN21Q16825 1174 aa13.33□□□□□ -0.28
TUBE1-202ENST00000368662 DUOXA2Q1HG44 320 aa13.33□□□□□ -0.28
TUBE1-202ENST00000368662 CNGA4Q8IV77 575 aa13.33□□□□□ -0.28
TUBE1-202ENST00000368662 CCDC150Q8NCX0 1101 aa13.33□□□□□ -0.28
TUBE1-202ENST00000368662 FBXL13Q8NEE6 735 aa13.33□□□□□ -0.28
TUBE1-202ENST00000368662 FAM212AQ96EL1 285 aa13.33□□□□□ -0.28
TUBE1-202ENST00000368662 POP1Q99575 1024 aaKnown RBP13.33□□□□□ -0.28
TUBE1-202ENST00000368662 CRACR2AQ9BSW2 395 aa13.33□□□□□ -0.28
TUBE1-202ENST00000368662 EDEM3Q9BZQ6 932 aa13.33□□□□□ -0.28
TUBE1-202ENST00000368662 FAM105AQ9NUU6 356 aa13.33□□□□□ -0.28
TUBE1-202ENST00000368662 COQ4Q9Y3A0 265 aa13.33□□□□□ -0.28
TUBE1-202ENST00000368662 TTC26A0AVF1 554 aa13.32□□□□□ -0.28
TUBE1-202ENST00000368662 CLTBP09497 229 aa13.32□□□□□ -0.28
TUBE1-202ENST00000368662 MBTPS1Q14703 1052 aa13.32□□□□□ -0.28
TUBE1-202ENST00000368662 ZACNQ401N2 412 aa13.32□□□□□ -0.28
TUBE1-202ENST00000368662 C15orf39Q6ZRI6 1047 aa13.32□□□□□ -0.28
TUBE1-202ENST00000368662 SV2AQ7L0J3 742 aa13.32□□□□□ -0.28
TUBE1-202ENST00000368662 TMEM192Q8IY95 271 aa13.32□□□□□ -0.28
TUBE1-202ENST00000368662 ZNF397Q8NF99 534 aaPredicted RBP13.32□□□□□ -0.28
TUBE1-202ENST00000368662 CACTINQ8WUQ7 758 aaKnown RBP13.32□□□□□ -0.28
TUBE1-202ENST00000368662 ANKRD36BP1Q96IX9 119 aa13.32□□□□□ -0.28
TUBE1-202ENST00000368662 FAM207AQ9NSI2 230 aaPredicted RBP13.32□□□□□ -0.28
TUBE1-202ENST00000368662 SNTG2Q9NY99 539 aa13.32□□□□□ -0.28
TUBE1-202ENST00000368662 FBXL5Q9UKA1 691 aa13.32□□□□□ -0.28
TUBE1-202ENST00000368662 DERAQ9Y315 318 aa13.32□□□□□ -0.28
TUBE1-202ENST00000368662 C2CD2Q9Y426 696 aa13.32□□□□□ -0.28
TUBE1-202ENST00000368662 IPPQ9Y573 584 aa13.32□□□□□ -0.28
TUBE1-202ENST00000368662 PCDHB2Q9Y5E7 798 aa13.32□□□□□ -0.28
TUBE1-202ENST00000368662 AKR1B15C9JRZ8 316 aaPredicted RBP13.31□□□□□ -0.28
TUBE1-202ENST00000368662 TNNC2P02585 160 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 GYPCP04921 128 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 TMEM191BP0C7N4 346 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 RFX1P22670 979 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 PON1P27169 355 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 DSC3Q14574 896 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 SLC10A6Q3KNW5 377 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 EPC2Q52LR7 807 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 TRIM65Q6PJ69 517 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 CCDC186Q7Z3E2 898 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 EHBP1Q8NDI1 1231 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 APBB2Q92870 758 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 TRIM44Q96DX7 344 aaPredicted RBP13.31□□□□□ -0.28
TUBE1-202ENST00000368662 LSM14BQ9BX40 385 aaKnown RBP13.31□□□□□ -0.28
TUBE1-202ENST00000368662 NXF3Q9H4D5 531 aaKnown RBP13.31□□□□□ -0.28
TUBE1-202ENST00000368662 TMEM39AQ9NV64 488 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 TBX21Q9UL17 535 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 CAPN11Q9UMQ6 739 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 LUC7L2Q9Y383 392 aaKnown RBP13.31□□□□□ -0.28
TUBE1-202ENST00000368662 A0A0U1RQF3 1178 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 LACTBL1A8MY62 500 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 ZNF623O75123 536 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 C4BPAP04003 597 aaKnown RBP13.31□□□□□ -0.28
TUBE1-202ENST00000368662 CASP14P31944 242 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 KLK7P49862 253 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 WNT7BP56706 349 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 BIRC3Q13489 604 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 LRRC26Q2I0M4 334 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 HS1BP3Q53T59 392 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 SMG8Q8ND04 991 aaKnown RBP13.31□□□□□ -0.28
TUBE1-202ENST00000368662 ZNF516Q92618 1163 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 SNX27Q96L92 541 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 TTYH3Q9C0H2 523 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 TMX1Q9H3N1 280 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 RAB20Q9NX57 234 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 CEP72Q9P209 647 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 CNTN3Q9P232 1028 aa13.31□□□□□ -0.28
TUBE1-202ENST00000368662 NRDCO43847 1150 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 ZC3H11AO75152 810 aaKnown RBP eCLIP13.3□□□□□ -0.28
TUBE1-202ENST00000368662 RECQL4O94761 1208 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 SLC9A1P19634 815 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 TMEM132DQ14C87 1099 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 KLHDC7AQ5VTJ3 777 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 LMBRD2Q68DH5 695 aaPredicted RBP13.3□□□□□ -0.28
TUBE1-202ENST00000368662 CACNA2D4Q7Z3S7 1137 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 SEPT8Q92599 483 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 PGBD4Q96DM1 585 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 FAM81BQ96LP2 452 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 ADAM2Q99965 735 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 INTS2Q9H0H0 1204 aaKnown RBP13.3□□□□□ -0.28
TUBE1-202ENST00000368662 NUCKS1Q9H1E3 243 aaKnown RBP13.3□□□□□ -0.28
TUBE1-202ENST00000368662 UBN1Q9NPG3 1134 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 RGS18Q9NS28 235 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 PARP2Q9UGN5 583 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 HES2Q9Y543 173 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms