RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 GPR62Q9BZJ7 368 aa11.68□□□□□ -0.54
TUBE1-201ENST00000368657 HELLSQ9NRZ9 838 aa11.68□□□□□ -0.54
TUBE1-201ENST00000368657 PIN4Q9Y237 131 aaKnown RBP11.68□□□□□ -0.54
TUBE1-201ENST00000368657 COL4A2P08572 1712 aa11.67□□□□□ -0.54
TUBE1-201ENST00000368657 PATE3B3GLJ2 98 aa11.67□□□□□ -0.54
TUBE1-201ENST00000368657 ARNTLO00327 626 aa11.67□□□□□ -0.54
TUBE1-201ENST00000368657 ZNF197O14709 1029 aa11.67□□□□□ -0.54
TUBE1-201ENST00000368657 SMARCA5O60264 1052 aaPredicted RBP11.67□□□□□ -0.54
TUBE1-201ENST00000368657 CSDE1O75534 798 aaKnown RBP11.67□□□□□ -0.54
TUBE1-201ENST00000368657 WISP1O95388 367 aa11.67□□□□□ -0.54
TUBE1-201ENST00000368657 WDR44Q5JSH3 913 aa11.67□□□□□ -0.54
TUBE1-201ENST00000368657 CYP2U1Q7Z449 544 aa11.67□□□□□ -0.54
TUBE1-201ENST00000368657 CCDC60Q8IWA6 550 aaPredicted RBP11.67□□□□□ -0.54
TUBE1-201ENST00000368657 HDDC3Q8N4P3 179 aa11.67□□□□□ -0.54
TUBE1-201ENST00000368657 SLC7A14Q8TBB6 771 aa11.67□□□□□ -0.54
TUBE1-201ENST00000368657 SMARCD2Q92925 531 aa11.67□□□□□ -0.54
TUBE1-201ENST00000368657 PRORYQ9H606 182 aa11.67□□□□□ -0.54
TUBE1-201ENST00000368657 MAFBQ9Y5Q3 323 aaPredicted RBP11.67□□□□□ -0.54
TUBE1-201ENST00000368657 NUP205Q92621 2012 aa11.67□□□□□ -0.54
TUBE1-201ENST00000368657 TEX15Q9BXT5 2789 aa11.67□□□□□ -0.54
TUBE1-201ENST00000368657 B4E1Z4 1266 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 SPECC1L-ADORA2AF8WAN1 911 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 CHADO15335 359 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 GBP1P32455 592 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 KIF5BP33176 963 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 FAM193AP78312 1265 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 DSC1Q08554 894 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 DSG2Q14126 1118 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 SLC5A9Q2M3M2 681 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 IFIT1BQ5T764 474 aaKnown RBP11.66□□□□□ -0.54
TUBE1-201ENST00000368657 PMS2CLQ68D20 193 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 TBC1D10CQ8IV04 446 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 YAF2Q8IY57 180 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 LRRC71Q8N4P6 559 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 CNNM3Q8NE01 707 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 TRPV4Q9HBA0 871 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 LY9Q9HBG7 655 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 ZSWIM5Q9P217 1185 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 EBF1Q9UH73 591 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 ADAM28Q9UKQ2 775 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 CACNA1EQ15878 2313 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 PLXNB3Q9ULL4 1909 aa11.66□□□□□ -0.54
TUBE1-201ENST00000368657 NEDD4P46934 1319 aa11.65□□□□□ -0.54
TUBE1-201ENST00000368657 ZNF213O14771 459 aa11.65□□□□□ -0.54
TUBE1-201ENST00000368657 DCLK1O15075 740 aa11.65□□□□□ -0.54
TUBE1-201ENST00000368657 CYTH3O43739 400 aa11.65□□□□□ -0.54
TUBE1-201ENST00000368657 CEBPBP17676 345 aa11.65□□□□□ -0.54
TUBE1-201ENST00000368657 CTHP32929 405 aa11.65□□□□□ -0.54
TUBE1-201ENST00000368657 MAPK8P45983 427 aa11.65□□□□□ -0.54
TUBE1-201ENST00000368657 FOXK1P85037 733 aa11.65□□□□□ -0.54
TUBE1-201ENST00000368657 PON2Q15165 354 aa11.65□□□□□ -0.54
TUBE1-201ENST00000368657 TRIP6Q15654 476 aaKnown RBP11.65□□□□□ -0.54
TUBE1-201ENST00000368657 SLC35G1Q2M3R5 365 aa11.65□□□□□ -0.54
TUBE1-201ENST00000368657 TRIM61Q5EBN2 209 aa11.65□□□□□ -0.54
TUBE1-201ENST00000368657 TSHZ3Q63HK5 1081 aa11.65□□□□□ -0.54
TUBE1-201ENST00000368657 PRSS55Q6UWB4 352 aaPredicted RBP11.65□□□□□ -0.54
TUBE1-201ENST00000368657 KRT25Q7Z3Z0 450 aa11.65□□□□□ -0.54
TUBE1-201ENST00000368657 PLPP6Q8IY26 295 aa11.65□□□□□ -0.54
TUBE1-201ENST00000368657 PSTPIP2Q9H939 334 aa11.65□□□□□ -0.54
TUBE1-201ENST00000368657 AGO4Q9HCK5 861 aaKnown RBP11.65□□□□□ -0.54
TUBE1-201ENST00000368657 EML5Q05BV3 1969 aa11.65□□□□□ -0.55
TUBE1-201ENST00000368657 TEP1Q99973 2627 aaKnown RBP11.64□□□□□ -0.55
TUBE1-201ENST00000368657 WDR27A2RRH5 827 aa11.64□□□□□ -0.55
TUBE1-201ENST00000368657 SPDYE3A6NKU9 549 aa11.64□□□□□ -0.55
TUBE1-201ENST00000368657 SLC38A8A6NNN8 435 aa11.64□□□□□ -0.55
TUBE1-201ENST00000368657 TADA2AO75478 443 aa11.64□□□□□ -0.55
TUBE1-201ENST00000368657 CCNE2O96020 404 aa11.64□□□□□ -0.55
TUBE1-201ENST00000368657 ENGP17813 658 aa11.64□□□□□ -0.55
TUBE1-201ENST00000368657 CYP4F3Q08477 520 aa11.64□□□□□ -0.55
TUBE1-201ENST00000368657 SPIRE1Q08AE8 756 aa11.64□□□□□ -0.55
TUBE1-201ENST00000368657 ITGB3BPQ13352 177 aaPredicted RBP11.64□□□□□ -0.55
TUBE1-201ENST00000368657 RAB33AQ14088 237 aa11.64□□□□□ -0.55
TUBE1-201ENST00000368657 PRSS36Q5K4E3 855 aa11.64□□□□□ -0.55
TUBE1-201ENST00000368657 TXNDC11Q6PKC3 985 aa11.64□□□□□ -0.55
TUBE1-201ENST00000368657 CATSPER4Q7RTX7 472 aa11.64□□□□□ -0.55
TUBE1-201ENST00000368657 TRMT1LQ7Z2T5 733 aaKnown RBP11.64□□□□□ -0.55
TUBE1-201ENST00000368657 LNX1Q8TBB1 728 aaPredicted RBP11.64□□□□□ -0.55
TUBE1-201ENST00000368657 PIP4K2CQ8TBX8 421 aa11.64□□□□□ -0.55
TUBE1-201ENST00000368657 FAM167AQ96KS9 214 aa11.64□□□□□ -0.55
TUBE1-201ENST00000368657 KIF2CQ99661 725 aa11.64□□□□□ -0.55
TUBE1-201ENST00000368657 UBAC1Q9BSL1 405 aa11.64□□□□□ -0.55
TUBE1-201ENST00000368657 TTPALQ9BTX7 342 aa11.64□□□□□ -0.55
TUBE1-201ENST00000368657 NRBP2Q9NSY0 501 aa11.64□□□□□ -0.55
TUBE1-201ENST00000368657 SEPT9Q9UHD8 586 aaPredicted RBP11.64□□□□□ -0.55
TUBE1-201ENST00000368657 DDX19BQ9UMR2 479 aa11.64□□□□□ -0.55
TUBE1-201ENST00000368657 APOBEC2Q9Y235 224 aaKnown RBP11.64□□□□□ -0.55
TUBE1-201ENST00000368657 PCDHB9Q9Y5E1 797 aa11.64□□□□□ -0.55
TUBE1-201ENST00000368657 PDCD11Q14690 1871 aaKnown RBP11.63□□□□□ -0.55
TUBE1-201ENST00000368657 TTC41PQ6P2S7 1318 aa11.63□□□□□ -0.55
TUBE1-201ENST00000368657 TEX51A0A1B0GUA7 166 aa11.63□□□□□ -0.55
TUBE1-201ENST00000368657 OPHN1O60890 802 aa11.63□□□□□ -0.55
TUBE1-201ENST00000368657 NUDT7P0C024 238 aa11.63□□□□□ -0.55
TUBE1-201ENST00000368657 VIPR2P41587 438 aa11.63□□□□□ -0.55
TUBE1-201ENST00000368657 DPP6P42658 865 aa11.63□□□□□ -0.55
TUBE1-201ENST00000368657 SOX9P48436 509 aa11.63□□□□□ -0.55
TUBE1-201ENST00000368657 ATXN3P54252 364 aaPredicted RBP11.63□□□□□ -0.55
TUBE1-201ENST00000368657 GRM4Q14833 912 aa11.63□□□□□ -0.55
TUBE1-201ENST00000368657 PSMD5Q16401 504 aa11.63□□□□□ -0.55
TUBE1-201ENST00000368657 MCMDC2Q4G0Z9 681 aa11.63□□□□□ -0.55
TUBE1-201ENST00000368657 USP39Q53GS9 565 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms