RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 SMARCAL1Q9NZC9 954 aa15.08■□□□□ 0
USF1-202ENST00000368020 EHD2Q9NZN4 543 aa15.08■□□□□ 0
USF1-202ENST00000368020 VPS18Q9P253 973 aa15.08■□□□□ 0
USF1-202ENST00000368020 UVRAGQ9P2Y5 699 aa15.08■□□□□ 0
USF1-202ENST00000368020 ZNFX1Q9P2E3 1918 aaKnown RBP15.07■□□□□ 0
USF1-202ENST00000368020 CCDC66A2RUB6 948 aa15.07■□□□□ 0
USF1-202ENST00000368020 K7ERI5 159 aa15.07■□□□□ 0
USF1-202ENST00000368020 KRIT1O00522 736 aa15.07■□□□□ 0
USF1-202ENST00000368020 HSF2BPO75031 334 aa15.07■□□□□ 0
USF1-202ENST00000368020 FARP2O94887 1054 aaPredicted RBP15.07■□□□□ 0
USF1-202ENST00000368020 MYBL2P10244 700 aa15.07■□□□□ 0
USF1-202ENST00000368020 ARL2P36404 184 aa15.07■□□□□ 0
USF1-202ENST00000368020 USP8P40818 1118 aa15.07■□□□□ 0
USF1-202ENST00000368020 EFNA5P52803 228 aa15.07■□□□□ 0
USF1-202ENST00000368020 AP3M2P53677 418 aa15.07■□□□□ 0
USF1-202ENST00000368020 SLC7A5Q01650 507 aa15.07■□□□□ 0
USF1-202ENST00000368020 CDR2Q01850 454 aa15.07■□□□□ 0
USF1-202ENST00000368020 SP2Q02086 613 aa15.07■□□□□ 0
USF1-202ENST00000368020 CRHR2Q13324 411 aa15.07■□□□□ 0
USF1-202ENST00000368020 METTL7BQ6UX53 244 aa15.07■□□□□ 0
USF1-202ENST00000368020 SND1Q7KZF4 910 aaKnown RBP eCLIP15.07■□□□□ 0
USF1-202ENST00000368020 SV2AQ7L0J3 742 aa15.07■□□□□ 0
USF1-202ENST00000368020 HELQQ8TDG4 1101 aa15.07■□□□□ 0
USF1-202ENST00000368020 PSPC1Q8WXF1 523 aaKnown RBP15.07■□□□□ 0
USF1-202ENST00000368020 SEPT1Q8WYJ6 367 aa15.07■□□□□ 0
USF1-202ENST00000368020 TRIM11Q96F44 468 aa15.07■□□□□ 0
USF1-202ENST00000368020 JPH2Q9BR39 696 aaPredicted RBP15.07■□□□□ 0
USF1-202ENST00000368020 AZI2Q9H6S1 392 aa15.07■□□□□ 0
USF1-202ENST00000368020 EPB41L5Q9HCM4 733 aa15.07■□□□□ 0
USF1-202ENST00000368020 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.07■□□□□ 0
USF1-202ENST00000368020 CTTNBP2NLQ9P2B4 639 aa15.07■□□□□ 0
USF1-202ENST00000368020 AGO2Q9UKV8 859 aaKnown RBP15.07■□□□□ 0
USF1-202ENST00000368020 GGPS1O95749 300 aa15.06■□□□□ 0
USF1-202ENST00000368020 CYP11B1P15538 503 aa15.06■□□□□ 0
USF1-202ENST00000368020 CNTN2Q02246 1040 aa15.06■□□□□ 0
USF1-202ENST00000368020 GUCY2DQ02846 1103 aa15.06■□□□□ 0
USF1-202ENST00000368020 PRPF4BQ13523 1007 aaKnown RBP15.06■□□□□ 0
USF1-202ENST00000368020 KCTD2Q14681 263 aa15.06■□□□□ 0
USF1-202ENST00000368020 C15orf39Q6ZRI6 1047 aa15.06■□□□□ 0
USF1-202ENST00000368020 TCP11Q8WWU5 503 aa15.06■□□□□ 0
USF1-202ENST00000368020 KREMEN1Q96MU8 473 aa15.06■□□□□ 0
USF1-202ENST00000368020 FAM213AQ9BRX8 229 aa15.06■□□□□ 0
USF1-202ENST00000368020 WNT8AQ9H1J5 351 aa15.06■□□□□ 0
USF1-202ENST00000368020 OSGEPQ9NPF4 335 aa15.06■□□□□ 0
USF1-202ENST00000368020 CPA4Q9UI42 421 aa15.06■□□□□ 0
USF1-202ENST00000368020 GTF3C4Q9UKN8 822 aa15.06■□□□□ 0
USF1-202ENST00000368020 DNAJC25-GNG10A0A024R161 153 aa15.06■□□□□ 0
USF1-202ENST00000368020 LRRIQ4A6NIV6 560 aa15.06■□□□□ 0
USF1-202ENST00000368020 GOLGA8KD6RF30 607 aa15.06■□□□□ 0
USF1-202ENST00000368020 GLI1P08151 1106 aa15.06■□□□□ 0
USF1-202ENST00000368020 DLATP10515 647 aaKnown RBP15.06■□□□□ 0
USF1-202ENST00000368020 SLC26A2P50443 739 aa15.06■□□□□ 0
USF1-202ENST00000368020 STAT5BP51692 787 aa15.06■□□□□ 0
USF1-202ENST00000368020 PPFIA1Q13136 1202 aa15.06■□□□□ 0
USF1-202ENST00000368020 TARBP2Q15633 366 aaKnown RBP15.06■□□□□ 0
USF1-202ENST00000368020 ZPBP2Q6X784 338 aa15.06■□□□□ 0
USF1-202ENST00000368020 TAS1R3Q7RTX0 852 aa15.06■□□□□ 0
USF1-202ENST00000368020 ZSWIM2Q8NEG5 633 aa15.06■□□□□ 0
USF1-202ENST00000368020 TAS1R2Q8TE23 839 aa15.06■□□□□ 0
USF1-202ENST00000368020 SLC20A1Q8WUM9 679 aa15.06■□□□□ 0
USF1-202ENST00000368020 SEMA4DQ92854 862 aa15.06■□□□□ 0
USF1-202ENST00000368020 PLVAPQ9BX97 442 aa15.06■□□□□ 0
USF1-202ENST00000368020 EFCC1Q9HA90 598 aa15.06■□□□□ 0
USF1-202ENST00000368020 THSD7BQ9C0I4 1608 aa15.06■□□□□ 0
USF1-202ENST00000368020 A6NNZ2 444 aa15.05■□□□□ -0
USF1-202ENST00000368020 CYP26A1O43174 497 aa15.05■□□□□ -0
USF1-202ENST00000368020 RNF40O75150 1001 aa15.05■□□□□ -0
USF1-202ENST00000368020 MYBL1P10243 752 aa15.05■□□□□ -0
USF1-202ENST00000368020 GLRA2P23416 452 aa15.05■□□□□ -0
USF1-202ENST00000368020 C1QTNF8P60827 252 aa15.05■□□□□ -0
USF1-202ENST00000368020 MXD4Q14582 209 aaPredicted RBP15.05■□□□□ -0
USF1-202ENST00000368020 TUBB8Q3ZCM7 444 aa15.05■□□□□ -0
USF1-202ENST00000368020 ZACNQ401N2 412 aa15.05■□□□□ -0
USF1-202ENST00000368020 NOP9Q86U38 636 aaKnown RBP15.05■□□□□ -0
USF1-202ENST00000368020 BBXQ8WY36 941 aaPredicted RBP15.05■□□□□ -0
USF1-202ENST00000368020 RUNDC3BQ96NL0 473 aa15.05■□□□□ -0
USF1-202ENST00000368020 MMP19Q99542 508 aa15.05■□□□□ -0
USF1-202ENST00000368020 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.05■□□□□ -0
USF1-202ENST00000368020 FAN1Q9Y2M0 1017 aa15.05■□□□□ -0
USF1-202ENST00000368020 PCDHB2Q9Y5E7 798 aa15.05■□□□□ -0
USF1-202ENST00000368020 IVNS1ABPQ9Y6Y0 642 aa15.05■□□□□ -0
USF1-202ENST00000368020 DOCK3Q8IZD9 2030 aa15.05■□□□□ -0
USF1-202ENST00000368020 DDX3YO15523 660 aaKnown RBP15.04■□□□□ -0
USF1-202ENST00000368020 SART1O43290 800 aaKnown RBP15.04■□□□□ -0
USF1-202ENST00000368020 RAD51CO43502 376 aa15.04■□□□□ -0
USF1-202ENST00000368020 MAFO75444 373 aaPredicted RBP15.04■□□□□ -0
USF1-202ENST00000368020 SGPL1O95470 568 aa15.04■□□□□ -0
USF1-202ENST00000368020 SYF2O95926 243 aaKnown RBP15.04■□□□□ -0
USF1-202ENST00000368020 CYP1A2P05177 515 aa15.04■□□□□ -0
USF1-202ENST00000368020 ATP4AP20648 1035 aa15.04■□□□□ -0
USF1-202ENST00000368020 TBXAS1P24557 533 aaPredicted RBP15.04■□□□□ -0
USF1-202ENST00000368020 IER5Q5VY09 327 aa15.04■□□□□ -0
USF1-202ENST00000368020 TRIM72Q6ZMU5 477 aa15.04■□□□□ -0
USF1-202ENST00000368020 KLHL7Q8IXQ5 586 aa15.04■□□□□ -0
USF1-202ENST00000368020 GSPT2Q8IYD1 628 aaKnown RBP15.04■□□□□ -0
USF1-202ENST00000368020 LRRC45Q96CN5 670 aa15.04■□□□□ -0
USF1-202ENST00000368020 ARHGEF26Q96DR7 871 aa15.04■□□□□ -0
USF1-202ENST00000368020 RNPC3Q96LT9 517 aaKnown RBP15.04■□□□□ -0
USF1-202ENST00000368020 RAB17Q9H0T7 212 aa15.04■□□□□ -0
USF1-202ENST00000368020 C2orf40Q9H1Z8 148 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms