RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 PLIN4Q96Q06 1357 aa5.7□□□□□ -1.5
CDC42BPA-204ENST00000366767 SH3BP5O60239 455 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 DGAT1O75907 488 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 SHMT1P34896 483 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 CCDC15Q0P6D6 951 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 TTLL12Q14166 644 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 KYAT1Q16773 422 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 IRF2BP1Q8IU81 584 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 FLCNQ8NFG4 579 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 GIMAP4Q9NUV9 329 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 PARVAQ9NVD7 372 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 ADAM22Q9P0K1 906 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 LZTS1Q9Y250 596 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 HARSP12081 509 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 TMEM154Q6P9G4 183 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 ZNF720Q7Z2F6 126 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 WDR75Q8IWA0 830 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 DNAJC19Q96DA6 116 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 HSPBP1Q9NZL4 362 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 ALG6Q9Y672 507 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 H3BQF6 201 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 PIK3CDO00329 1044 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 DCTN3O75935 186 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 ACTN1P12814 892 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 ZNF572Q7Z3I7 529 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 STAMBPL1Q96FJ0 436 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 RMDN3Q96TC7 470 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 SH3GL2Q99962 352 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 FRMD8P1Q9BZ68 369 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 HAUS2Q9NVX0 235 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 DBR1Q9UK59 544 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 DENND3A2RUS2 1198 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 H0Y3Z8 333 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 HNRNPCL1O60812 293 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 ATF7P17544 494 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 HNRNPH1P31943 449 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 TMC2Q8TDI7 906 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 ELAC2Q9BQ52 826 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 ADPGKQ9BRR6 497 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 GTF3C4Q9UKN8 822 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 CSADQ9Y600 493 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 XPOTO43592 962 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 TMOD1P28289 359 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 XKR3Q5GH77 459 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 ACAD10Q6JQN1 1059 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 RSPH3Q86UC2 560 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 CCT8L2Q96SF2 557 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 TLR10Q9BXR5 811 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 DNAJC5Q9H3Z4 198 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 FGFR1OP2Q9NVK5 253 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 GJA3Q9Y6H8 435 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 DUSP10Q9Y6W6 482 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 MYH15Q9Y2K3 1946 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 KRT1P04264 644 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 PLEKP08567 350 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 EIF2AK2P19525 551 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 EEF1B2P24534 225 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 COPB2P35606 906 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 MRPS15P82914 257 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 KCNMA1Q12791 1236 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 SPARCL1Q14515 664 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 PTPROQ16827 1216 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 BMT2Q1RMZ1 405 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 KLHL38Q2WGJ6 581 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 KCNV1Q6PIU1 500 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 APLFQ8IW19 511 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 CASKIN2Q8WXE0 1202 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 MTRQ99707 1265 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 MMTAG2Q9BU76 263 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 NUP85Q9BW27 656 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 SGK1O00141 431 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 PPP2R5CQ13362 524 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 GRAMD1BQ3KR37 738 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 BAP1Q92560 729 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 GPRASP2Q96D09 838 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 SERPINB12Q96P63 405 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 TRAIPQ9BWF2 469 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 TTYH3Q9C0H2 523 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 IQANK1A0A1B0GTG1 560 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 CNGA1P29973 690 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 HSD17B3P37058 310 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 TNFAIP2Q03169 654 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 PTGISQ16647 500 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 C11orf63Q6NUN7 778 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 ERICH1Q86X53 443 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 GDAP1Q8TB36 358 aa5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 RIN2Q8WYP3 895 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 DDX28Q9NUL7 540 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-204ENST00000366767 DUOX1Q9NRD9 1551 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 GOLGA8IPA6NC78 632 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 GOLGA8JA6NMD2 632 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 ESRRAP11474 423 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 TPP2P29144 1249 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 MTERF2Q49AM1 385 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 PDZD4Q76G19 769 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 ZNF571Q7Z3V5 609 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 C4orf19Q8IY42 314 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 RCOR2Q8IZ40 523 aa5.68□□□□□ -1.5
CDC42BPA-204ENST00000366767 GLG1Q92896 1179 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms