RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 ATP8A1Q9Y2Q0 1164 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 MYH7P12883 1935 aa9.26□□□□□ -0.93
YBX3-204ENST00000366290 DOCK1Q14185 1865 aa9.25□□□□□ -0.93
YBX3-204ENST00000366290 CTNND1O60716 968 aaKnown RBP9.25□□□□□ -0.93
YBX3-204ENST00000366290 GLI4P10075 376 aa9.25□□□□□ -0.93
YBX3-204ENST00000366290 COL6A2P12110 1019 aa9.25□□□□□ -0.93
YBX3-204ENST00000366290 PDE6AP16499 860 aa9.25□□□□□ -0.93
YBX3-204ENST00000366290 ARL4AP40617 200 aa9.25□□□□□ -0.93
YBX3-204ENST00000366290 AFMP43652 599 aa9.25□□□□□ -0.93
YBX3-204ENST00000366290 MECP2P51608 486 aaKnown RBP9.25□□□□□ -0.93
YBX3-204ENST00000366290 MAP3K12Q12852 859 aa9.25□□□□□ -0.93
YBX3-204ENST00000366290 STRN3Q13033 797 aa9.25□□□□□ -0.93
YBX3-204ENST00000366290 DHCR24Q15392 516 aa9.25□□□□□ -0.93
YBX3-204ENST00000366290 SKOR2Q2VWA4 1001 aaPredicted RBP9.25□□□□□ -0.93
YBX3-204ENST00000366290 OTUD7BQ6GQQ9 843 aa9.25□□□□□ -0.93
YBX3-204ENST00000366290 OTOP3Q7RTS5 596 aa9.25□□□□□ -0.93
YBX3-204ENST00000366290 CHST14Q8NCH0 376 aa9.25□□□□□ -0.93
YBX3-204ENST00000366290 SH3RF3Q8TEJ3 882 aaPredicted RBP9.25□□□□□ -0.93
YBX3-204ENST00000366290 BRI3BPQ8WY22 251 aa9.25□□□□□ -0.93
YBX3-204ENST00000366290 CABP5Q9NP86 173 aa9.25□□□□□ -0.93
YBX3-204ENST00000366290 AATFQ9NY61 560 aaKnown RBP eCLIP9.25□□□□□ -0.93
YBX3-204ENST00000366290 STAP2Q9UGK3 403 aa9.25□□□□□ -0.93
YBX3-204ENST00000366290 RNF114Q9Y508 228 aa9.25□□□□□ -0.93
YBX3-204ENST00000366290 FLT1P17948 1338 aa9.25□□□□□ -0.93
YBX3-204ENST00000366290 DDX60LQ5H9U9 1706 aaKnown RBP9.25□□□□□ -0.93
YBX3-204ENST00000366290 MYH1P12882 1939 aa9.25□□□□□ -0.93
YBX3-204ENST00000366290 TCRBV5S4A2TA0A5A2 114 aa9.24□□□□□ -0.93
YBX3-204ENST00000366290 IDH1O75874 414 aaKnown RBP9.24□□□□□ -0.93
YBX3-204ENST00000366290 PAPLNO95428 1278 aa9.24□□□□□ -0.93
YBX3-204ENST00000366290 CETPP11597 493 aa9.24□□□□□ -0.93
YBX3-204ENST00000366290 MX1P20591 662 aa9.24□□□□□ -0.93
YBX3-204ENST00000366290 PDE1AP54750 535 aa9.24□□□□□ -0.93
YBX3-204ENST00000366290 LACTBP83111 547 aaPredicted RBP9.24□□□□□ -0.93
YBX3-204ENST00000366290 SNAPC2Q13487 334 aa9.24□□□□□ -0.93
YBX3-204ENST00000366290 PICALMQ13492 652 aa9.24□□□□□ -0.93
YBX3-204ENST00000366290 HABP4Q5JVS0 413 aaKnown RBP9.24□□□□□ -0.93
YBX3-204ENST00000366290 FBXO46Q6PJ61 603 aaPredicted RBP9.24□□□□□ -0.93
YBX3-204ENST00000366290 OSTM1Q86WC4 334 aa9.24□□□□□ -0.93
YBX3-204ENST00000366290 DDX42Q86XP3 938 aaKnown RBP eCLIP9.24□□□□□ -0.93
YBX3-204ENST00000366290 TEX11Q8IYF3 940 aa9.24□□□□□ -0.93
YBX3-204ENST00000366290 RPUSD2Q8IZ73 545 aaKnown RBP9.24□□□□□ -0.93
YBX3-204ENST00000366290 SCYL3Q8IZE3 742 aa9.24□□□□□ -0.93
YBX3-204ENST00000366290 MAGEB6Q8N7X4 407 aa9.24□□□□□ -0.93
YBX3-204ENST00000366290 PIP4K2CQ8TBX8 421 aa9.24□□□□□ -0.93
YBX3-204ENST00000366290 EDC3Q96F86 508 aaKnown RBP9.24□□□□□ -0.93
YBX3-204ENST00000366290 RIOK1Q9BRS2 568 aaKnown RBP9.24□□□□□ -0.93
YBX3-204ENST00000366290 NOL10Q9BSC4 688 aaKnown RBP9.24□□□□□ -0.93
YBX3-204ENST00000366290 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.24□□□□□ -0.93
YBX3-204ENST00000366290 TNFRSF12AQ9NP84 129 aa9.24□□□□□ -0.93
YBX3-204ENST00000366290 ECHDC1Q9NTX5 307 aa9.24□□□□□ -0.93
YBX3-204ENST00000366290 PI4KBQ9UBF8 816 aa9.24□□□□□ -0.93
YBX3-204ENST00000366290 HERC5Q9UII4 1024 aaKnown RBP9.24□□□□□ -0.93
YBX3-204ENST00000366290 ATAD5Q96QE3 1844 aa9.24□□□□□ -0.93
YBX3-204ENST00000366290 CCL15-CCL14A0A0B4J2E2 113 aa9.23□□□□□ -0.93
YBX3-204ENST00000366290 ZNF891A8MT65 544 aaPredicted RBP9.23□□□□□ -0.93
YBX3-204ENST00000366290 ZNF561-AS1K7EIQ3 104 aa9.23□□□□□ -0.93
YBX3-204ENST00000366290 CXCL11O14625 94 aa9.23□□□□□ -0.93
YBX3-204ENST00000366290 NKRFO15226 690 aaKnown RBP eCLIP9.23□□□□□ -0.93
YBX3-204ENST00000366290 SCNN1BP51168 640 aa9.23□□□□□ -0.93
YBX3-204ENST00000366290 CRHR2Q13324 411 aa9.23□□□□□ -0.93
YBX3-204ENST00000366290 MOGSQ13724 837 aa9.23□□□□□ -0.93
YBX3-204ENST00000366290 GPR19Q15760 415 aa9.23□□□□□ -0.93
YBX3-204ENST00000366290 CCL15Q16663 113 aa9.23□□□□□ -0.93
YBX3-204ENST00000366290 FYB2Q5VWT5 728 aa9.23□□□□□ -0.93
YBX3-204ENST00000366290 ARHGAP36Q6ZRI8 547 aa9.23□□□□□ -0.93
YBX3-204ENST00000366290 NETO2Q8NC67 525 aa9.23□□□□□ -0.93
YBX3-204ENST00000366290 OR2W6PQ8NHA6 318 aa9.23□□□□□ -0.93
YBX3-204ENST00000366290 KIRREL1Q96J84 757 aa9.23□□□□□ -0.93
YBX3-204ENST00000366290 BOLA2Q9H3K6 86 aa9.23□□□□□ -0.93
YBX3-204ENST00000366290 SLC6A20Q9NP91 592 aa9.23□□□□□ -0.93
YBX3-204ENST00000366290 B4GALT6Q9UBX8 382 aa9.23□□□□□ -0.93
YBX3-204ENST00000366290 MCM8Q9UJA3 840 aa9.23□□□□□ -0.93
YBX3-204ENST00000366290 YBX2Q9Y2T7 364 aaKnown RBP9.23□□□□□ -0.93
YBX3-204ENST00000366290 AFG3L2Q9Y4W6 797 aa9.23□□□□□ -0.93
YBX3-204ENST00000366290 TTC41PQ6P2S7 1318 aa9.23□□□□□ -0.93
YBX3-204ENST00000366290 GOLIM4O00461 696 aa9.22□□□□□ -0.93
YBX3-204ENST00000366290 KRIT1O00522 736 aa9.22□□□□□ -0.93
YBX3-204ENST00000366290 F2P00734 622 aa9.22□□□□□ -0.93
YBX3-204ENST00000366290 AMY2AP04746 511 aa9.22□□□□□ -0.93
YBX3-204ENST00000366290 DBHP09172 617 aa9.22□□□□□ -0.93
YBX3-204ENST00000366290 CPEP16870 476 aa9.22□□□□□ -0.93
YBX3-204ENST00000366290 KRT15P19012 456 aa9.22□□□□□ -0.93
YBX3-204ENST00000366290 AMY2BP19961 511 aa9.22□□□□□ -0.93
YBX3-204ENST00000366290 SLC6A11P48066 632 aa9.22□□□□□ -0.93
YBX3-204ENST00000366290 JAM2P57087 298 aa9.22□□□□□ -0.93
YBX3-204ENST00000366290 DSG1Q02413 1049 aa9.22□□□□□ -0.93
YBX3-204ENST00000366290 SLC9C2Q5TAH2 1124 aa9.22□□□□□ -0.93
YBX3-204ENST00000366290 FOXP4Q8IVH2 680 aaPredicted RBP9.22□□□□□ -0.93
YBX3-204ENST00000366290 FAM43AQ8N2R8 423 aa9.22□□□□□ -0.93
YBX3-204ENST00000366290 NXPE1Q8N323 547 aa9.22□□□□□ -0.93
YBX3-204ENST00000366290 TGFBRAP1Q8WUH2 860 aa9.22□□□□□ -0.93
YBX3-204ENST00000366290 SMURF1Q9HCE7 757 aa9.22□□□□□ -0.93
YBX3-204ENST00000366290 PAG1Q9NWQ8 432 aa9.22□□□□□ -0.93
YBX3-204ENST00000366290 ZKSCAN5Q9Y2L8 839 aa9.22□□□□□ -0.93
YBX3-204ENST00000366290 A0A0G2JLL6 359 aaPredicted RBP9.21□□□□□ -0.94
YBX3-204ENST00000366290 BTBD19C9JJ37 291 aa9.21□□□□□ -0.94
YBX3-204ENST00000366290 EYA4O95677 639 aa9.21□□□□□ -0.94
YBX3-204ENST00000366290 HMGB1P09429 215 aaKnown RBP9.21□□□□□ -0.94
YBX3-204ENST00000366290 JUNBP17275 347 aaPredicted RBP9.21□□□□□ -0.94
YBX3-204ENST00000366290 ADD2P35612 726 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms