RNA–Protein interactions for RNA: ENST00000366197.9

ZNF548-202, Transcript of zinc finger protein 548, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF548, Length 4,955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-202ENST00000366197 HP1BP3Q5SSJ5 553 aaPredicted RBP10.91□□□□□ -0.66
ZNF548-202ENST00000366197 RASIP1Q5U651 963 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 EFCAB12Q6NXP0 572 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 DHX40Q8IX18 779 aaKnown RBP10.91□□□□□ -0.66
ZNF548-202ENST00000366197 CCDC124Q96CT7 223 aaKnown RBP10.91□□□□□ -0.66
ZNF548-202ENST00000366197 SENP2Q9HC62 589 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 DYRK4Q9NR20 520 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 PPP1R9AQ9ULJ8 1098 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 APOBEC2Q9Y235 224 aaKnown RBP10.91□□□□□ -0.66
ZNF548-202ENST00000366197 ESYT3A0FGR9 886 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 UPP2O95045 317 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 ITGA4P13612 1032 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 PCSK1P29120 753 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 IFNA8P32881 189 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 PMS2P54278 862 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 TPI1P60174 286 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.91□□□□□ -0.66
ZNF548-202ENST00000366197 ATF7IP2Q5U623 682 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 ANGPTL8Q6UXH0 198 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 LRRC71Q8N4P6 559 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 SYT2Q8N9I0 419 aaPredicted RBP10.91□□□□□ -0.66
ZNF548-202ENST00000366197 RDM1Q8NG50 284 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 GIPC2Q8TF65 315 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 C1orf54Q8WWF1 131 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 RNPC3Q96LT9 517 aaKnown RBP10.91□□□□□ -0.66
ZNF548-202ENST00000366197 MED15Q96RN5 788 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 ELAC2Q9BQ52 826 aaKnown RBP10.91□□□□□ -0.66
ZNF548-202ENST00000366197 TRIM54Q9BYV2 358 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 TRPV6Q9H1D0 765 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 QRICH2Q9H0J4 1663 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 IGSF9BQ9UPX0 1349 aa10.91□□□□□ -0.66
ZNF548-202ENST00000366197 A0A087WUV0 522 aaPredicted RBP10.9□□□□□ -0.66
ZNF548-202ENST00000366197 MMEP08473 750 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 PDGFRBP09619 1106 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 SRGNP10124 158 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 SSTR3P32745 418 aaPredicted RBP10.9□□□□□ -0.66
ZNF548-202ENST00000366197 FAM47EQ6ZV65 393 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 EPM2AIP1Q7L775 607 aaPredicted RBP10.9□□□□□ -0.66
ZNF548-202ENST00000366197 ZBED8Q8IZ13 594 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 RBBP8NLQ8NC74 664 aaPredicted RBP10.9□□□□□ -0.66
ZNF548-202ENST00000366197 KIF2CQ99661 725 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 MKNK1Q9BUB5 465 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 FGFR1OP2Q9NVK5 253 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 LSM7Q9UK45 103 aaKnown RBP10.9□□□□□ -0.66
ZNF548-202ENST00000366197 DIP2AQ14689 1571 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 TYK2P29597 1187 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 RGS7P49802 495 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 SH3BGRP55822 239 aaPredicted RBP10.9□□□□□ -0.66
ZNF548-202ENST00000366197 HIBCHQ6NVY1 386 aaPredicted RBP10.9□□□□□ -0.66
ZNF548-202ENST00000366197 SNX19Q92543 992 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 GPRASP2Q96D09 838 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 TAAR1Q96RJ0 339 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 LBHD1Q9BQE6 289 aaPredicted RBP10.9□□□□□ -0.66
ZNF548-202ENST00000366197 NT5C1AQ9BXI3 368 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 TAF1DQ9H5J8 278 aaPredicted RBP10.9□□□□□ -0.66
ZNF548-202ENST00000366197 PLEKHA5Q9HAU0 1116 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 HACD3Q9P035 362 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 CPSF2Q9P2I0 782 aaKnown RBP10.9□□□□□ -0.66
ZNF548-202ENST00000366197 PCDHB2Q9Y5E7 798 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 DLC1Q96QB1 1528 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 A0A1B0GTH6 734 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 APOL1O14791 398 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 IL18RAPO95256 599 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 BRAFP15056 766 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 SREBF2Q12772 1141 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 DCAF4L1Q3SXM0 396 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 ZC2HC1CQ53FD0 456 aaPredicted RBP10.9□□□□□ -0.66
ZNF548-202ENST00000366197 IZUMO3Q5VZ72 239 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 ERO1BQ86YB8 467 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 ATL2Q8NHH9 583 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 CCDC138Q96M89 665 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 TARS2Q9BW92 718 aaKnown RBP10.9□□□□□ -0.66
ZNF548-202ENST00000366197 TRAIPQ9BWF2 469 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 GTSE1Q9NYZ3 720 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 EHD2Q9NZN4 543 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 NEXMIFQ5QGS0 1516 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 PXDNLA1KZ92 1463 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 UBA6A0AVT1 1052 aaPredicted RBP10.9□□□□□ -0.66
ZNF548-202ENST00000366197 F5H423 210 aaPredicted RBP10.9□□□□□ -0.66
ZNF548-202ENST00000366197 SPECC1L-ADORA2AF8WAN1 911 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 UBE2Q2LH0YL09 131 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 DCTN3O75935 186 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 ALDH1A1P00352 501 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 MYBP10242 640 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 FDPSP14324 419 aaKnown RBP10.9□□□□□ -0.66
ZNF548-202ENST00000366197 FXR2P51116 673 aaKnown RBP eCLIP10.9□□□□□ -0.66
ZNF548-202ENST00000366197 GALCP54803 685 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 EIF3EP60228 445 aaKnown RBP10.9□□□□□ -0.66
ZNF548-202ENST00000366197 NFIAQ12857 509 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 DHX34Q14147 1143 aaKnown RBP10.9□□□□□ -0.66
ZNF548-202ENST00000366197 HSP90AA5PQ58FG0 334 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 YAF2Q8IY57 180 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 SLC30A5Q8TAD4 765 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 ZKSCAN4Q969J2 545 aaPredicted RBP10.9□□□□□ -0.66
ZNF548-202ENST00000366197 DDX27Q96GQ7 796 aaKnown RBP10.9□□□□□ -0.66
ZNF548-202ENST00000366197 EGFL8Q99944 293 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 HDAC6Q9UBN7 1215 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 POLLQ9UGP5 575 aa10.9□□□□□ -0.66
ZNF548-202ENST00000366197 FER1L4A9Z1Z3 1794 aa10.9□□□□□ -0.67
ZNF548-202ENST00000366197 SNRPFP62306 86 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms