RNA–Protein interactions for RNA: ENST00000363858.1

RNU6-271P-201, Transcript of RNA, U6 small nuclear 271, pseudogene, humanhuman

BASIC

Gene RNU6-271P, Length 105 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-271P-201ENST00000363858 SBK3P0C264 359 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 PTPN7P35236 360 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 CHN2P52757 468 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 RNASE9P60153 205 aaKnown RBP2.57□□□□□ -2
RNU6-271P-201ENST00000363858 NHLH2Q02577 135 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 SCAPQ12770 1279 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 CRHR2Q13324 411 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 TUBA3CQ13748 450 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 CNGB1Q14028 1251 aaPredicted RBP2.57□□□□□ -2
RNU6-271P-201ENST00000363858 ACAP2Q15057 778 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 PTPN21Q16825 1174 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 LSM12Q3MHD2 195 aaKnown RBP2.57□□□□□ -2
RNU6-271P-201ENST00000363858 FLYWCH1Q4VC44 716 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 PDCD4Q53EL6 469 aaKnown RBP2.57□□□□□ -2
RNU6-271P-201ENST00000363858 OTUD7BQ6GQQ9 843 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 TUBA3EQ6PEY2 450 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 SEM1Q6ZVN7 128 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 MRGPREQ86SM8 312 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 CASKIN2Q8WXE0 1202 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 LARP4BQ92615 738 aaKnown RBP2.57□□□□□ -2
RNU6-271P-201ENST00000363858 TFAP2CQ92754 450 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 MRGPRX4Q96LA9 322 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 MRI1Q9BV20 369 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 RTFDC1Q9BY42 306 aaPredicted RBP2.57□□□□□ -2
RNU6-271P-201ENST00000363858 PCED1AQ9H1Q7 454 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 MMRN2Q9H8L6 949 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 LANCL2Q9NS86 450 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 HOMER2Q9NSB8 354 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 AURKAIP1Q9NWT8 199 aaPredicted RBP2.57□□□□□ -2
RNU6-271P-201ENST00000363858 DDX56Q9NY93 547 aaKnown RBP2.57□□□□□ -2
RNU6-271P-201ENST00000363858 INTUQ9ULD6 942 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 SORCS3Q9UPU3 1222 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 THRAP3Q9Y2W1 955 aaKnown RBP2.57□□□□□ -2
RNU6-271P-201ENST00000363858 PCDHA13Q9Y5I0 950 aa2.57□□□□□ -2
RNU6-271P-201ENST00000363858 CENPVL1A0A0U1RR11 272 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 LRRC14BA6NHZ5 514 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 FAM171A2A8MVW0 826 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 GOLGA6L6A8MZA4 724 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 TRIM24O15164 1050 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 GPR32O75388 356 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 NCR1O76036 304 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 ENDOD1O94919 500 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 ABLIM3O94929 683 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 FSHBP01225 129 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 ADKP55263 362 aaKnown RBP2.56□□□□□ -2
RNU6-271P-201ENST00000363858 CLRN1P58418 232 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 ZNF280AP59817 542 aaPredicted RBP2.56□□□□□ -2
RNU6-271P-201ENST00000363858 RAP2BP61225 183 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 KIF23Q02241 960 aaPredicted RBP2.56□□□□□ -2
RNU6-271P-201ENST00000363858 MCL1Q07820 350 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 SLFN5Q08AF3 891 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 BEAN1Q3B7T3 259 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 TMEM240Q5SV17 173 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 AGAP9Q5VTM2 703 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 UBE3BQ7Z3V4 1068 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 LDLRAD3Q86YD5 345 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 PLXDC1Q8IUK5 500 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 AMOTL1Q8IY63 956 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 GSPT2Q8IYD1 628 aaKnown RBP2.56□□□□□ -2
RNU6-271P-201ENST00000363858 CPT1CQ8TCG5 803 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 CCHCR1Q8TD31 782 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 NSUN6Q8TEA1 469 aaKnown RBP2.56□□□□□ -2
RNU6-271P-201ENST00000363858 ZNF483Q8TF39 744 aaPredicted RBP2.56□□□□□ -2
RNU6-271P-201ENST00000363858 SSH1Q8WYL5 1049 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 LENG9Q96B70 501 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 ZNF341Q9BYN7 854 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 SENP6Q9GZR1 1112 aaPredicted RBP2.56□□□□□ -2
RNU6-271P-201ENST00000363858 TMPRSS5Q9H3S3 457 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 SPON1Q9HCB6 807 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 KLHL11Q9NVR0 708 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 HSFX1Q9UBD0 423 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 RUVBL1Q9Y265 456 aaKnown RBP2.56□□□□□ -2
RNU6-271P-201ENST00000363858 HS3ST3A1Q9Y663 406 aa2.56□□□□□ -2
RNU6-271P-201ENST00000363858 MYBBP1AQ9BQG0 1328 aaKnown RBP2.56□□□□□ -2
RNU6-271P-201ENST00000363858 TCRBV7S2A1N4TA0A589 114 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 GRID2IPA4D2P6 1211 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 TMEM200CA6NKL6 621 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 PRR5-ARHGAP8B1AHC4 643 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 NT5C1B-RDH14C9J2C7 533 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 SCAF4O95104 1147 aaKnown RBP2.55□□□□□ -2
RNU6-271P-201ENST00000363858 PEX11BO96011 259 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 PDGFRBP09619 1106 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 RAP2AP10114 183 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 ATP5JP18859 108 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 DDCP20711 480 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 NEK2P51955 445 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 CTXN1P60606 82 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 NOMO3P69849 1222 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 EXOSC10Q01780 885 aaKnown RBP2.55□□□□□ -2
RNU6-271P-201ENST00000363858 COL10A1Q03692 680 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 OCA2Q04671 838 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 TLE1Q04724 770 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 NOMO2Q5JPE7 1267 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 ATXN7L2Q5T6C5 722 aaPredicted RBP2.55□□□□□ -2
RNU6-271P-201ENST00000363858 B3GNTL1Q67FW5 361 aaPredicted RBP2.55□□□□□ -2
RNU6-271P-201ENST00000363858 ZNF529Q6P280 563 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 PDZD4Q76G19 769 aaPredicted RBP2.55□□□□□ -2
RNU6-271P-201ENST00000363858 GDF7Q7Z4P5 450 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 RHOT1Q8IXI2 618 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 PRR18Q8N4B5 295 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms