RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 NAB2Q15742 525 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 TLK2Q86UE8 772 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 RABGGTAQ92696 567 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 KIF12Q96FN5 646 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 BCCIPQ9P287 314 aaKnown RBP eCLIP12.48□□□□□ -0.41
HPS1-204ENST00000361490 ANAPC7Q9UJX3 599 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 DLEC1Q9Y238 1755 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 IGF2BP3O00425 579 aaKnown RBP eCLIP12.48□□□□□ -0.41
HPS1-204ENST00000361490 GRIK4Q16099 956 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 SLC39A4Q6P5W5 647 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 CXCL17Q6UXB2 119 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 KIAA0319LQ8IZA0 1049 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 MAML3Q96JK9 1138 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 KIAA1586Q9HCI6 787 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 AIPL1Q9NZN9 384 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 AGAP1Q9UPQ3 857 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 PTPN22Q9Y2R2 807 aa12.48□□□□□ -0.41
HPS1-204ENST00000361490 M0QZ92 97 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 MAFO75444 373 aaPredicted RBP12.47□□□□□ -0.41
HPS1-204ENST00000361490 GJB6O95452 261 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 CTNNA2P26232 953 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 SNX1Q13596 522 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 CST9Q5W186 159 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 SND1Q7KZF4 910 aaKnown RBP eCLIP12.47□□□□□ -0.41
HPS1-204ENST00000361490 CCDC25Q86WR0 208 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 SNX12Q9UMY4 172 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 BUB1BO60566 1050 aaPredicted RBP12.47□□□□□ -0.41
HPS1-204ENST00000361490 ITGB3P05106 788 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 AKAP5P24588 427 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 ZNF667Q5HYK9 610 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 HEXIM2Q96MH2 286 aaKnown RBP12.47□□□□□ -0.41
HPS1-204ENST00000361490 ZIC5Q96T25 663 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 NUP85Q9BW27 656 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 HEMGNQ9BXL5 484 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 DDX47Q9H0S4 455 aaKnown RBP12.47□□□□□ -0.41
HPS1-204ENST00000361490 C2orf40Q9H1Z8 148 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 MINDY3Q9H8M7 445 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 KLHL11Q9NVR0 708 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 MYH11P35749 1972 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 SIPA1L1O43166 1804 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 SMIM23A6NLE4 172 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 MYO1FO00160 1098 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 FGGP02679 453 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 ICAM3P32942 547 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 KIF22Q14807 665 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 DAB2IPQ5VWQ8 1189 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 TMEM192Q8IY95 271 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 TTC16Q8NEE8 873 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 ARHGEF26Q96DR7 871 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 ABCB6Q9NP58 842 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 DMAC2Q9NW81 257 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 ADAM22Q9P0K1 906 aa12.47□□□□□ -0.41
HPS1-204ENST00000361490 ERICH4A6NGS2 130 aa12.46□□□□□ -0.41
HPS1-204ENST00000361490 PPFIA4O75335 1185 aa12.46□□□□□ -0.41
HPS1-204ENST00000361490 NPTXRO95502 500 aa12.46□□□□□ -0.41
HPS1-204ENST00000361490 CST3P01034 146 aaPredicted RBP12.46□□□□□ -0.41
HPS1-204ENST00000361490 RARBP10826 455 aa12.46□□□□□ -0.41
HPS1-204ENST00000361490 GARTP22102 1010 aa12.46□□□□□ -0.41
HPS1-204ENST00000361490 MARSP56192 900 aaKnown RBP12.46□□□□□ -0.41
HPS1-204ENST00000361490 VSNL1P62760 191 aa12.46□□□□□ -0.41
HPS1-204ENST00000361490 TRAPPC11Q7Z392 1133 aa12.46□□□□□ -0.41
HPS1-204ENST00000361490 NOP9Q86U38 636 aaKnown RBP12.46□□□□□ -0.41
HPS1-204ENST00000361490 MS4A4AQ96JQ5 239 aa12.46□□□□□ -0.41
HPS1-204ENST00000361490 CCDC114Q96M63 670 aa12.46□□□□□ -0.41
HPS1-204ENST00000361490 FAM118BQ9BPY3 351 aa12.46□□□□□ -0.41
HPS1-204ENST00000361490 LRRC1Q9BTT6 524 aa12.46□□□□□ -0.41
HPS1-204ENST00000361490 ARHGAP28Q9P2N2 729 aa12.46□□□□□ -0.41
HPS1-204ENST00000361490 INPP5FQ9Y2H2 1132 aa12.46□□□□□ -0.41
HPS1-204ENST00000361490 SYNJ2BP-COX16A0A087WUM0 186 aa12.46□□□□□ -0.42
HPS1-204ENST00000361490 OGTO15294 1046 aa12.46□□□□□ -0.42
HPS1-204ENST00000361490 CTIFO43310 598 aaKnown RBP12.46□□□□□ -0.42
HPS1-204ENST00000361490 ELNP15502 786 aa12.46□□□□□ -0.42
HPS1-204ENST00000361490 CYP11B1P15538 503 aa12.46□□□□□ -0.42
HPS1-204ENST00000361490 BRD2P25440 801 aaKnown RBP12.46□□□□□ -0.42
HPS1-204ENST00000361490 TDRD10Q5VZ19 366 aaKnown RBP12.46□□□□□ -0.42
HPS1-204ENST00000361490 CYFIP2Q96F07 1278 aa12.46□□□□□ -0.42
HPS1-204ENST00000361490 EPB41L5Q9HCM4 733 aa12.46□□□□□ -0.42
HPS1-204ENST00000361490 COX16Q9P0S2 106 aa12.46□□□□□ -0.42
HPS1-204ENST00000361490 UMODL1Q5DID0 1318 aa12.46□□□□□ -0.42
HPS1-204ENST00000361490 PDE2AO00408 941 aaPredicted RBP12.46□□□□□ -0.42
HPS1-204ENST00000361490 PPP1R37O75864 691 aa12.46□□□□□ -0.42
HPS1-204ENST00000361490 STAG3L1P0CL83 205 aa12.46□□□□□ -0.42
HPS1-204ENST00000361490 ATF7P17544 494 aaPredicted RBP12.46□□□□□ -0.42
HPS1-204ENST00000361490 TNNC1P63316 161 aa12.46□□□□□ -0.42
HPS1-204ENST00000361490 GPC5P78333 572 aa12.46□□□□□ -0.42
HPS1-204ENST00000361490 FAM110CQ1W6H9 321 aa12.46□□□□□ -0.42
HPS1-204ENST00000361490 SYCE1Q8N0S2 351 aa12.46□□□□□ -0.42
HPS1-204ENST00000361490 RBBP8NLQ8NC74 664 aaPredicted RBP12.46□□□□□ -0.42
HPS1-204ENST00000361490 UHMK1Q8TAS1 419 aaKnown RBP12.46□□□□□ -0.42
HPS1-204ENST00000361490 LNX1Q8TBB1 728 aaPredicted RBP12.46□□□□□ -0.42
HPS1-204ENST00000361490 KREMEN1Q96MU8 473 aa12.46□□□□□ -0.42
HPS1-204ENST00000361490 CCDC94Q9BW85 323 aaPredicted RBP12.46□□□□□ -0.42
HPS1-204ENST00000361490 SIX2Q9NPC8 291 aa12.46□□□□□ -0.42
HPS1-204ENST00000361490 TSKSQ9UJT2 592 aa12.46□□□□□ -0.42
HPS1-204ENST00000361490 SNAI1O95863 264 aaPredicted RBP12.45□□□□□ -0.42
HPS1-204ENST00000361490 HTRA3P83110 453 aa12.45□□□□□ -0.42
HPS1-204ENST00000361490 IFRD2Q12894 506 aaPredicted RBP12.45□□□□□ -0.42
HPS1-204ENST00000361490 LIN9Q5TKA1 542 aa12.45□□□□□ -0.42
HPS1-204ENST00000361490 TAS1R3Q7RTX0 852 aa12.45□□□□□ -0.42
HPS1-204ENST00000361490 MAATS1Q7Z4T9 603 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms