RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 TMCO2Q7Z6W1 182 aaPredicted RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 TMTC1Q8IUR5 882 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 GSTCDQ8NEC7 633 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 CEP72Q9P209 647 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 PRDM4Q9UKN5 801 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 ZNF233A6NK53 670 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 F8VZ95 297 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 SPTLC1O15269 473 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 SLC16A3O15427 465 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 PIGRP01833 764 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 INHAP05111 366 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 STAG3L1P0CL83 205 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 RARBP10826 455 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 GHRP10912 638 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 PROZP22891 400 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 PPP1R2P41236 205 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 FCGRTP55899 365 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 DGKDQ16760 1214 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 CCDC122Q5T0U0 273 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 KRT39Q6A163 491 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 AADACL2Q6P093 401 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 TRAPPC11Q7Z392 1133 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 SLC47A2Q86VL8 602 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 ZNF710Q8N1W2 664 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 BTBD6Q96KE9 485 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 METTL14Q9HCE5 456 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 TUBGCP4Q9UGJ1 667 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 COQ4Q9Y3A0 265 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 NR2E1Q9Y466 385 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 I3L4J1 428 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 NPTXRO95502 500 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 KRT13P13646 458 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 JAM2P57087 298 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 STRN3Q13033 797 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 NFIL3Q16649 462 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 PAN2Q504Q3 1202 aaKnown RBP3.09□□□□□ -1.91
LTN1-201ENST00000361371 SFMBT2Q5VUG0 894 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 ALKBH5Q6P6C2 394 aaKnown RBP3.09□□□□□ -1.91
LTN1-201ENST00000361371 PPP4R3CPQ6ZMV5 832 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 CATSPER4Q7RTX7 472 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 RTN4RL1Q86UN2 441 aaPredicted RBP3.09□□□□□ -1.91
LTN1-201ENST00000361371 BRSK2Q8IWQ3 736 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 SHC3Q92529 594 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 MMS19Q96T76 1030 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 SLX1AQ9BQ83 275 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 XYLT2Q9H1B5 865 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 FAM53CQ9NYF3 392 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 PUF60Q9UHX1 559 aaKnown RBP3.09□□□□□ -1.91
LTN1-201ENST00000361371 NAGPAQ9UK23 515 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 NENFQ9UMX5 172 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 FRMD4BQ9Y2L6 1034 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 EIF3CLB5ME19 914 aaKnown RBP3.09□□□□□ -1.91
LTN1-201ENST00000361371 OGTO15294 1046 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 SEPT4O43236 478 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 SLC26A4O43511 780 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 PSMD6Q15008 389 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 TMEM132AQ24JP5 1023 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 MAP3K21Q5TCX8 1036 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 PASD1Q8IV76 773 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 RNF169Q8NCN4 708 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 EPS8L1Q8TE68 723 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 CYFIP2Q96F07 1278 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 PIWIL1Q96J94 861 aaKnown RBP3.09□□□□□ -1.91
LTN1-201ENST00000361371 FAM167AQ96KS9 214 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 EIF3CQ99613 913 aaKnown RBP3.09□□□□□ -1.91
LTN1-201ENST00000361371 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.09□□□□□ -1.91
LTN1-201ENST00000361371 THAP2Q9H0W7 228 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 APEX2Q9UBZ4 518 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 NOCTQ9UK39 431 aaKnown RBP3.09□□□□□ -1.91
LTN1-201ENST00000361371 TIMM13Q9Y5L4 95 aaPredicted RBP3.09□□□□□ -1.91
LTN1-201ENST00000361371 CDK5RAP2Q96SN8 1893 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 PIK3R2O00459 728 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 DKC1O60832 514 aaKnown RBP eCLIP3.09□□□□□ -1.91
LTN1-201ENST00000361371 DUSP11O75319 330 aaKnown RBP3.09□□□□□ -1.91
LTN1-201ENST00000361371 CHRNA1P02708 482 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 KRT19P08727 400 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 GARTP22102 1010 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 GALCP54803 685 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 ERCC6LQ2NKX8 1250 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 ZNF484Q5JVG2 852 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 FOXR2Q6PJQ5 311 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 MPZL3Q6UWV2 235 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 CYP26C1Q6V0L0 522 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 INTS8Q75QN2 995 aaKnown RBP3.09□□□□□ -1.91
LTN1-201ENST00000361371 SESTD1Q86VW0 696 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 KCTD17Q8N5Z5 321 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 FBXL13Q8NEE6 735 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 TMC2Q8TDI7 906 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 WHAMMQ8TF30 809 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 VTI1AQ96AJ9 217 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 SEPT11Q9NVA2 429 aaKnown RBP3.09□□□□□ -1.91
LTN1-201ENST00000361371 PCDHA13Q9Y5I0 950 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 STK24Q9Y6E0 443 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 RANBP2P49792 3224 aaKnown RBP3.09□□□□□ -1.91
LTN1-201ENST00000361371 LAMA2P24043 3122 aaKnown RBP3.09□□□□□ -1.91
LTN1-201ENST00000361371 A0A1B0GUA9 196 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 GABBR2O75899 941 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 CLSTN1O94985 981 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 MMEP08473 750 aa3.09□□□□□ -1.91
LTN1-201ENST00000361371 DARSP14868 501 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms