RNA–Protein interactions for RNA: ENST00000360047.9

PDE4D-205, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 3,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-205ENST00000360047 VWA3BQ502W6 1294 aa5.34□□□□□ -1.55
PDE4D-205ENST00000360047 CCDC38Q502W7 563 aa5.34□□□□□ -1.55
PDE4D-205ENST00000360047 ZC3H12BQ5HYM0 836 aaKnown RBP5.34□□□□□ -1.55
PDE4D-205ENST00000360047 C6orf118Q5T5N4 469 aa5.34□□□□□ -1.55
PDE4D-205ENST00000360047 PCNX4Q63HM2 1172 aa5.34□□□□□ -1.55
PDE4D-205ENST00000360047 CAPRIN2Q6IMN6 1127 aaKnown RBP5.34□□□□□ -1.55
PDE4D-205ENST00000360047 TAOK1Q7L7X3 1001 aa5.34□□□□□ -1.55
PDE4D-205ENST00000360047 NEK8Q86SG6 692 aa5.34□□□□□ -1.55
PDE4D-205ENST00000360047 RSAD2Q8WXG1 361 aa5.34□□□□□ -1.55
PDE4D-205ENST00000360047 RBM18Q96H35 190 aaKnown RBP5.34□□□□□ -1.55
PDE4D-205ENST00000360047 FAM167BQ9BTA0 163 aa5.34□□□□□ -1.55
PDE4D-205ENST00000360047 WDR11Q9BZH6 1224 aa5.34□□□□□ -1.55
PDE4D-205ENST00000360047 AP5M1Q9H0R1 490 aa5.34□□□□□ -1.55
PDE4D-205ENST00000360047 ACTR5Q9H9F9 607 aaPredicted RBP5.34□□□□□ -1.55
PDE4D-205ENST00000360047 HPS4Q9NQG7 708 aa5.34□□□□□ -1.55
PDE4D-205ENST00000360047 PKD2L1Q9P0L9 805 aa5.34□□□□□ -1.55
PDE4D-205ENST00000360047 SSX2IPQ9Y2D8 614 aa5.34□□□□□ -1.55
PDE4D-205ENST00000360047 RPTORQ8N122 1335 aa5.34□□□□□ -1.55
PDE4D-205ENST00000360047 DOCK3Q8IZD9 2030 aa5.34□□□□□ -1.55
PDE4D-205ENST00000360047 GOLGA6L10A6NI86 522 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 SOWAHDA6NJG2 315 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 PRRT4C9JH25 899 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 MYO1FO00160 1098 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 EIF3HO15372 352 aaKnown RBP eCLIP5.34□□□□□ -1.56
PDE4D-205ENST00000360047 RARBP10826 455 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 HARSP12081 509 aaKnown RBP5.34□□□□□ -1.56
PDE4D-205ENST00000360047 KRT10P13645 584 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 SREBF1P36956 1147 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 MLLT1Q03111 559 aaPredicted RBP5.34□□□□□ -1.56
PDE4D-205ENST00000360047 TNFAIP2Q03169 654 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 TMEM62Q0P6H9 643 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 BNIP1Q12981 228 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 PRR16Q569H4 304 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 BRDTQ58F21 947 aaPredicted RBP5.34□□□□□ -1.56
PDE4D-205ENST00000360047 IQSEC1Q6DN90 963 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 MIS18BP1Q6P0N0 1132 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 THSD4Q6ZMP0 1018 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 CEP68Q76N32 757 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 ARHGAP22Q7Z5H3 698 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 SRGAP1Q7Z6B7 1085 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 NOSTRINQ8IVI9 506 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 NAT8LQ8N9F0 302 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 TNIP2Q8NFZ5 429 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 TRIM58Q8NG06 486 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 SCFD2Q8WU76 684 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.34□□□□□ -1.56
PDE4D-205ENST00000360047 TIFAQ96CG3 184 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 MLXIPQ9HAP2 919 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 CEP131Q9UPN4 1083 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 IPPQ9Y573 584 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 PCDHGB7Q9Y5F8 929 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 SMCHD1A6NHR9 2005 aa5.34□□□□□ -1.56
PDE4D-205ENST00000360047 TRIM64A6NGJ6 449 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 TRIM64BA6NI03 449 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 PPP1R3GB7ZBB8 358 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 TFRCP02786 760 aaKnown RBP5.33□□□□□ -1.56
PDE4D-205ENST00000360047 AKR1A1P14550 325 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 ADCYAP1R1P41586 468 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 CSE1LP55060 971 aaKnown RBP5.33□□□□□ -1.56
PDE4D-205ENST00000360047 SMAD4Q13485 552 aaKnown RBP5.33□□□□□ -1.56
PDE4D-205ENST00000360047 MTMR1Q13613 665 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 ACAP1Q15027 740 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 RCN1Q15293 331 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 STX1AQ16623 288 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 CEP55Q53EZ4 464 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 CCDC80Q76M96 950 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 LAPTM4BQ86VI4 370 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 IL31RAQ8NI17 732 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 WNT2BQ93097 391 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 SHISA4Q96DD7 197 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 FGD4Q96M96 766 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 CEP295NLQ96MC4 621 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 MXRA8Q9BRK3 442 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 PPP1R12CQ9BZL4 782 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 ANKZF1Q9H8Y5 726 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 NGRNQ9NPE2 291 aaKnown RBP5.33□□□□□ -1.56
PDE4D-205ENST00000360047 PDGFCQ9NRA1 345 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 PCDHGC5Q9Y5F6 944 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 GOLGA6L7A0A1B0GV03 622 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 SRRM3A6NNA2 597 aaPredicted RBP5.33□□□□□ -1.56
PDE4D-205ENST00000360047 ADAMTS3O15072 1205 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 DYNC1LI2O43237 492 aaPredicted RBP5.33□□□□□ -1.56
PDE4D-205ENST00000360047 SORBS3O60504 671 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 MSCO60682 206 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 SMNDC1O75940 238 aaKnown RBP eCLIP5.33□□□□□ -1.56
PDE4D-205ENST00000360047 CYP3A4P08684 503 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 CCL5P13501 91 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 PRLRP16471 622 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 EDNRBP24530 442 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 MCM3P25205 808 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 CCND3P30281 292 aaPredicted RBP5.33□□□□□ -1.56
PDE4D-205ENST00000360047 PAPOLAP51003 745 aaKnown RBP5.33□□□□□ -1.56
PDE4D-205ENST00000360047 KRT85P78386 507 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 SP4Q02446 784 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 CYP4A11Q02928 519 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 ZNF174Q15697 407 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 TMEM164Q5U3C3 297 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 PLBD1Q6P4A8 553 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 CATSPER4Q7RTX7 472 aa5.33□□□□□ -1.56
PDE4D-205ENST00000360047 TNS4Q8IZW8 715 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms