RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 MYO3BQ8WXR4 1341 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 E2F8A0AVK6 867 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 ANGPT2O15123 496 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 HSPA1AP0DMV8 641 aaKnown RBP19.38■□□□□ 0.69
SHANK1-202ENST00000359082 HSPA1BP0DMV9 641 aaKnown RBP19.38■□□□□ 0.69
SHANK1-202ENST00000359082 IRF1P10914 325 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 SOX11P35716 441 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 CDK17Q00537 523 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 TAP1Q03518 808 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 HIC1Q14526 733 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 MFSD14CQ5VZR4 134 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 RPAP3Q9H6T3 665 aaPredicted RBP19.38■□□□□ 0.69
SHANK1-202ENST00000359082 GPBP1L1Q9HC44 474 aaPredicted RBP19.38■□□□□ 0.69
SHANK1-202ENST00000359082 DCP1AQ9NPI6 582 aaPredicted RBP19.38■□□□□ 0.69
SHANK1-202ENST00000359082 MAP4P27816 1152 aaKnown RBP19.38■□□□□ 0.69
SHANK1-202ENST00000359082 NBPF9Q3BBW0 867 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 EPHA10Q5JZY3 1008 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 TRIM72Q6ZMU5 477 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 CPA5Q8WXQ8 436 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 YWHABP31946 246 aaKnown RBP19.38■□□□□ 0.69
SHANK1-202ENST00000359082 SPP2Q13103 211 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 ZNF555Q8NEP9 628 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 TMA16Q96EY4 203 aaKnown RBP19.38■□□□□ 0.69
SHANK1-202ENST00000359082 ZNF185O15231 689 aa19.37■□□□□ 0.69
SHANK1-202ENST00000359082 PPP3CCP48454 512 aa19.37■□□□□ 0.69
SHANK1-202ENST00000359082 SLC9A5Q14940 896 aa19.37■□□□□ 0.69
SHANK1-202ENST00000359082 SKIV2LQ15477 1246 aaKnown RBP19.37■□□□□ 0.69
SHANK1-202ENST00000359082 ZNF513Q8N8E2 541 aaPredicted RBP19.37■□□□□ 0.69
SHANK1-202ENST00000359082 ACAD9Q9H845 621 aa19.37■□□□□ 0.69
SHANK1-202ENST00000359082 TCP11X1B4DZS4 312 aa19.37■□□□□ 0.69
SHANK1-202ENST00000359082 GUCY1A3Q02108 690 aa19.37■□□□□ 0.69
SHANK1-202ENST00000359082 PAWRQ96IZ0 340 aaKnown RBP19.37■□□□□ 0.69
SHANK1-202ENST00000359082 AMACRQ9UHK6 382 aa19.37■□□□□ 0.69
SHANK1-202ENST00000359082 ARHGAP26Q9UNA1 814 aa19.37■□□□□ 0.69
SHANK1-202ENST00000359082 MYO1GB0I1T2 1018 aa19.37■□□□□ 0.69
SHANK1-202ENST00000359082 RTN2O75298 545 aa19.37■□□□□ 0.69
SHANK1-202ENST00000359082 SELENONQ9NZV5 590 aa19.37■□□□□ 0.69
SHANK1-202ENST00000359082 ZNF197O14709 1029 aa19.37■□□□□ 0.69
SHANK1-202ENST00000359082 PGM1P36871 562 aa19.37■□□□□ 0.69
SHANK1-202ENST00000359082 RAD51Q06609 339 aa19.37■□□□□ 0.69
SHANK1-202ENST00000359082 PIN4Q9Y237 131 aaKnown RBP19.37■□□□□ 0.69
SHANK1-202ENST00000359082 KIF28PB7ZC32 967 aa19.37■□□□□ 0.69
SHANK1-202ENST00000359082 SUPT3HO75486 399 aa19.37■□□□□ 0.69
SHANK1-202ENST00000359082 VEPH1Q14D04 833 aa19.37■□□□□ 0.69
SHANK1-202ENST00000359082 SLC30A5Q8TAD4 765 aa19.37■□□□□ 0.69
SHANK1-202ENST00000359082 BTN2A2Q8WVV5 523 aa19.37■□□□□ 0.69
SHANK1-202ENST00000359082 ROBO2Q9HCK4 1378 aa19.37■□□□□ 0.69
SHANK1-202ENST00000359082 P3H1Q32P28 736 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 TMCO5AQ8N6Q1 288 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 OR6J1Q8NGC5 347 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 ASAP3Q8TDY4 903 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 ZNF560Q96MR9 790 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 DDX28Q9NUL7 540 aaKnown RBP19.36■□□□□ 0.69
SHANK1-202ENST00000359082 ZFATQ9P243 1243 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 NMT1P30419 496 aaKnown RBP19.36■□□□□ 0.69
SHANK1-202ENST00000359082 RGS7P49802 495 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 ATXN3P54252 364 aaPredicted RBP19.36■□□□□ 0.69
SHANK1-202ENST00000359082 MRPL28Q13084 256 aaKnown RBP19.36■□□□□ 0.69
SHANK1-202ENST00000359082 GTF2H3Q13889 308 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 DHX34Q14147 1143 aaKnown RBP19.36■□□□□ 0.69
SHANK1-202ENST00000359082 DUOXA2Q1HG44 320 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 NBPF10Q6P3W6 841 aaKnown RBP19.36■□□□□ 0.69
SHANK1-202ENST00000359082 MB21D2Q8IYB1 491 aaPredicted RBP19.36■□□□□ 0.69
SHANK1-202ENST00000359082 TMEM161AQ9NX61 479 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 C5orf58C9J3I9 102 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 ADCK2Q7Z695 626 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 RFFLQ8WZ73 363 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 ERBB3P21860 1342 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 OLFM3Q96PB7 478 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 TSSK1BQ9BXA7 367 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 CDC42BPGQ6DT37 1551 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 PRKCBP05771 671 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 LRRC74AQ0VAA2 488 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 BTNL9Q6UXG8 535 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 ENOSF1Q7L5Y1 443 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 APOBEC3FQ8IUX4 373 aaKnown RBP19.36■□□□□ 0.69
SHANK1-202ENST00000359082 TRABDQ9H4I3 376 aa19.36■□□□□ 0.69
SHANK1-202ENST00000359082 MED21Q13503 144 aa19.35■□□□□ 0.69
SHANK1-202ENST00000359082 INPP5AQ14642 412 aa19.35■□□□□ 0.69
SHANK1-202ENST00000359082 RNF149Q8NC42 400 aa19.35■□□□□ 0.69
SHANK1-202ENST00000359082 NPHS2Q9NP85 383 aa19.35■□□□□ 0.69
SHANK1-202ENST00000359082 ADCK1Q86TW2 530 aa19.35■□□□□ 0.69
SHANK1-202ENST00000359082 RNPC3Q96LT9 517 aaKnown RBP19.35■□□□□ 0.69
SHANK1-202ENST00000359082 ADGRG1Q9Y653 693 aa19.35■□□□□ 0.69
SHANK1-202ENST00000359082 COL15A1P39059 1388 aa19.35■□□□□ 0.69
SHANK1-202ENST00000359082 ZNF263O14978 683 aa19.35■□□□□ 0.69
SHANK1-202ENST00000359082 KDM1AO60341 852 aa19.35■□□□□ 0.69
SHANK1-202ENST00000359082 SCP2P22307 547 aa19.35■□□□□ 0.69
SHANK1-202ENST00000359082 STAG2Q8N3U4 1231 aa19.35■□□□□ 0.69
SHANK1-202ENST00000359082 DDX50Q9BQ39 737 aaKnown RBP19.35■□□□□ 0.69
SHANK1-202ENST00000359082 LBHD1Q9BQE6 289 aaPredicted RBP19.35■□□□□ 0.69
SHANK1-202ENST00000359082 F5H6K3 240 aa19.35■□□□□ 0.69
SHANK1-202ENST00000359082 KLRC3Q07444 240 aa19.35■□□□□ 0.69
SHANK1-202ENST00000359082 LONP2Q86WA8 852 aa19.35■□□□□ 0.69
SHANK1-202ENST00000359082 HPS3Q969F9 1004 aa19.35■□□□□ 0.69
SHANK1-202ENST00000359082 PALMDQ9NP74 551 aa19.35■□□□□ 0.69
SHANK1-202ENST00000359082 HSD17B4P51659 736 aa19.34■□□□□ 0.69
SHANK1-202ENST00000359082 DYNC1I2Q13409 638 aaKnown RBP19.34■□□□□ 0.69
SHANK1-202ENST00000359082 LONRF1Q17RB8 773 aa19.34■□□□□ 0.69
SHANK1-202ENST00000359082 WWP1Q9H0M0 922 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms