RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 OSBPL1AQ9BXW6 950 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 KIAA1683Q9H0B3 1180 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 GPRC5CQ9NQ84 441 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 SMNDC1O75940 238 aaKnown RBP eCLIP10.82□□□□□ -0.68
PTPRA-203ENST00000356147 ZSCAN5DPP0CG00 497 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 KRT5P13647 590 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 GAP43P17677 238 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 PCK1P35558 622 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 FMO1Q01740 532 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 ZFYVE27Q5T4F4 411 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 MIS18BP1Q6P0N0 1132 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 SBF2Q86WG5 1849 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 SUPT20HQ8NEM7 779 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 CCHCR1Q8TD31 782 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 FAM20AQ96MK3 541 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 TMEM109Q9BVC6 243 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 WNT8AQ9H1J5 351 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 ALG13Q9NP73 1137 aaKnown RBP10.82□□□□□ -0.68
PTPRA-203ENST00000356147 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.82□□□□□ -0.68
PTPRA-203ENST00000356147 PLIN4Q96Q06 1357 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 ATF2P15336 505 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 ATP2B4P23634 1241 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 AP3B2Q13367 1082 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 FASTKD3Q14CZ7 662 aaKnown RBP10.82□□□□□ -0.68
PTPRA-203ENST00000356147 GNPTABQ3T906 1256 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 C1orf220Q5T0J3 134 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 TRMT10CQ7L0Y3 403 aaKnown RBP10.82□□□□□ -0.68
PTPRA-203ENST00000356147 GLIS1Q8NBF1 620 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 SPDYE1Q8NFV5 336 aaPredicted RBP10.82□□□□□ -0.68
PTPRA-203ENST00000356147 ZNF483Q8TF39 744 aaPredicted RBP10.82□□□□□ -0.68
PTPRA-203ENST00000356147 CPA5Q8WXQ8 436 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 NAF1Q96HR8 494 aaKnown RBP10.82□□□□□ -0.68
PTPRA-203ENST00000356147 SERPINB12Q96P63 405 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 DMAC2Q9NW81 257 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 PRKAG3Q9UGI9 489 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 CHKBQ9Y259 395 aa10.82□□□□□ -0.68
PTPRA-203ENST00000356147 CNTNAP4Q9C0A0 1308 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 MYH11P35749 1972 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 IGLV3-22A0A075B6J6 115 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 ARHGEF35A5YM69 484 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 PPP1R12AO14974 1030 aaPredicted RBP10.81□□□□□ -0.68
PTPRA-203ENST00000356147 EIF3DO15371 548 aaKnown RBP eCLIP10.81□□□□□ -0.68
PTPRA-203ENST00000356147 BANF1O75531 89 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 UNC5CO95185 931 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 ETS1P14921 441 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 HSPA6P17066 643 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 IVDP26440 423 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 SATB1Q01826 763 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 RASA3Q14644 834 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 KAZNQ674X7 775 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 CBWD2Q8IUF1 395 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 LXNQ9BS40 222 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 POLR3CQ9BUI4 534 aaPredicted RBP10.81□□□□□ -0.68
PTPRA-203ENST00000356147 TMEM117Q9H0C3 514 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 UNC45AQ9H3U1 944 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 NOCTQ9UK39 431 aaKnown RBP10.81□□□□□ -0.68
PTPRA-203ENST00000356147 GRID1Q9ULK0 1009 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 USP20Q9Y2K6 914 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 NHSQ6T4R5 1651 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 PI4K2BG5E9Z4 385 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 ADRB2P07550 413 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 LINGO3P0C6S8 592 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 RALAP11233 206 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 CD58P19256 250 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 MAPK4P31152 587 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 PSMC4P43686 418 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 MXI1P50539 228 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 OVGP1Q12889 678 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 TRAPPC3LQ5T215 181 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 LMBRD2Q68DH5 695 aaPredicted RBP10.81□□□□□ -0.68
PTPRA-203ENST00000356147 RFX8Q6ZV50 586 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 CYFIP1Q7L576 1253 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 PASD1Q8IV76 773 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 ARMC2Q8NEN0 867 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 FBF1Q8TES7 1133 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 HAUS1Q96CS2 278 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 SNF8Q96H20 258 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 RPS6KC1Q96S38 1066 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 ROPN1BQ9BZX4 212 aaPredicted RBP10.81□□□□□ -0.68
PTPRA-203ENST00000356147 ROPN1Q9HAT0 212 aaPredicted RBP10.81□□□□□ -0.68
PTPRA-203ENST00000356147 METTL5Q9NRN9 209 aaKnown RBP10.81□□□□□ -0.68
PTPRA-203ENST00000356147 DCTN4Q9UJW0 460 aa10.81□□□□□ -0.68
PTPRA-203ENST00000356147 DPPA5A6NC42 116 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 SPDYE5A6NIY4 337 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 GOLGA8SH3BPF8 625 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 GOLGA8MH3BSY2 632 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 KRT15P19012 456 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 CYP1B1Q16678 543 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 SYDE2Q5VT97 1194 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 APOBEC3HQ6NTF7 200 aaKnown RBP10.8□□□□□ -0.68
PTPRA-203ENST00000356147 RHBDF2Q6PJF5 856 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 GSTA5Q7RTV2 222 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 ANKS1BQ7Z6G8 1248 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 LONP2Q86WA8 852 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 FAM13CQ8NE31 585 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 TBC1D22AQ8WUA7 517 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 PSPC1Q8WXF1 523 aaKnown RBP10.8□□□□□ -0.68
PTPRA-203ENST00000356147 ACSF2Q96CM8 615 aaPredicted RBP10.8□□□□□ -0.68
PTPRA-203ENST00000356147 NUDCD1Q96RS6 583 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 MKNK1Q9BUB5 465 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms