RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 MCPH1Q8NEM0 835 aa22.89■■□□□ 1.26
PTPN18-202ENST00000347849 ASAP3Q8TDY4 903 aa22.89■■□□□ 1.26
PTPN18-202ENST00000347849 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.89■■□□□ 1.262e-6■□□□□ 8.4
PTPN18-202ENST00000347849 CNOT8Q9UFF9 292 aaKnown RBP22.89■■□□□ 1.26
PTPN18-202ENST00000347849 BZW2Q9Y6E2 419 aaKnown RBP22.89■■□□□ 1.26
PTPN18-202ENST00000347849 DKC1O60832 514 aaKnown RBP eCLIP22.89■■□□□ 1.25
PTPN18-202ENST00000347849 POLGP54098 1239 aaPredicted RBP22.89■■□□□ 1.25
PTPN18-202ENST00000347849 IFI16Q16666 785 aaKnown RBP22.89■■□□□ 1.25
PTPN18-202ENST00000347849 PEX26Q7Z412 305 aa22.89■■□□□ 1.25
PTPN18-202ENST00000347849 PALB2Q86YC2 1186 aa22.89■■□□□ 1.25
PTPN18-202ENST00000347849 GLYCTKQ8IVS8 523 aa22.89■■□□□ 1.25
PTPN18-202ENST00000347849 CCDC114Q96M63 670 aa22.89■■□□□ 1.25
PTPN18-202ENST00000347849 UBE2TQ9NPD8 197 aaPredicted RBP22.89■■□□□ 1.25
PTPN18-202ENST00000347849 IGKV6D-21A0A0A0MT36 114 aa22.88■■□□□ 1.25
PTPN18-202ENST00000347849 CYP2C8P10632 490 aa22.88■■□□□ 1.25
PTPN18-202ENST00000347849 MAP2K1Q02750 393 aaPredicted RBP22.88■■□□□ 1.25
PTPN18-202ENST00000347849 BIRC3Q13489 604 aa22.88■■□□□ 1.25
PTPN18-202ENST00000347849 ZC3H15Q8WU90 426 aaKnown RBP22.88■■□□□ 1.25
PTPN18-202ENST00000347849 SEMA4DQ92854 862 aa22.88■■□□□ 1.25
PTPN18-202ENST00000347849 MAF1Q9H063 256 aa22.88■■□□□ 1.25
PTPN18-202ENST00000347849 GOLGA6L7A0A1B0GV03 622 aa22.88■■□□□ 1.25
PTPN18-202ENST00000347849 DCDC2CA8MYV0 355 aa22.88■■□□□ 1.25
PTPN18-202ENST00000347849 GGPS1O95749 300 aa22.88■■□□□ 1.25
PTPN18-202ENST00000347849 FERP16591 822 aa22.88■■□□□ 1.25
PTPN18-202ENST00000347849 PPP2R2AP63151 447 aa22.88■■□□□ 1.25
PTPN18-202ENST00000347849 DRP2Q13474 957 aa22.88■■□□□ 1.25
PTPN18-202ENST00000347849 WDR78Q5VTH9 848 aa22.88■■□□□ 1.25
PTPN18-202ENST00000347849 TPCN2Q8NHX9 752 aa22.88■■□□□ 1.25
PTPN18-202ENST00000347849 U2AF1L4Q8WU68 220 aaKnown RBP22.88■■□□□ 1.25
PTPN18-202ENST00000347849 POMGNT1Q8WZA1 660 aa22.88■■□□□ 1.25
PTPN18-202ENST00000347849 CALR3Q96L12 384 aaKnown RBP22.88■■□□□ 1.25
PTPN18-202ENST00000347849 ARHGAP28Q9P2N2 729 aa22.88■■□□□ 1.25
PTPN18-202ENST00000347849 EXOC7Q9UPT5 735 aa22.88■■□□□ 1.25
PTPN18-202ENST00000347849 HNRNPDLO14979 420 aaKnown RBP22.87■■□□□ 1.25
PTPN18-202ENST00000347849 RASSF9O75901 435 aa22.87■■□□□ 1.25
PTPN18-202ENST00000347849 TRIM50Q86XT4 487 aa22.87■■□□□ 1.25
PTPN18-202ENST00000347849 SYT11Q9BT88 431 aa22.87■■□□□ 1.25
PTPN18-202ENST00000347849 C17orf75Q9HAS0 396 aa22.87■■□□□ 1.25
PTPN18-202ENST00000347849 SLC40A1Q9NP59 571 aa22.87■■□□□ 1.25
PTPN18-202ENST00000347849 TTI1O43156 1089 aa22.87■■□□□ 1.25
PTPN18-202ENST00000347849 MAGOHP61326 146 aaKnown RBP22.87■■□□□ 1.25
PTPN18-202ENST00000347849 SLC30A5Q8TAD4 765 aa22.87■■□□□ 1.25
PTPN18-202ENST00000347849 PARD3BQ8TEW8 1205 aa22.87■■□□□ 1.25
PTPN18-202ENST00000347849 MAGOHBQ96A72 148 aaKnown RBP22.87■■□□□ 1.25
PTPN18-202ENST00000347849 CELF4Q9BZC1 486 aaKnown RBP22.87■■□□□ 1.25
PTPN18-202ENST00000347849 OSBPL7Q9BZF2 842 aa22.87■■□□□ 1.25
PTPN18-202ENST00000347849 DHX33Q9H6R0 707 aaKnown RBP22.87■■□□□ 1.25
PTPN18-202ENST00000347849 ZNF408Q9H9D4 720 aa22.87■■□□□ 1.25
PTPN18-202ENST00000347849 EDN1P05305 212 aa22.86■■□□□ 1.25
PTPN18-202ENST00000347849 GLRA2P23416 452 aa22.86■■□□□ 1.25
PTPN18-202ENST00000347849 MXI1P50539 228 aa22.86■■□□□ 1.25
PTPN18-202ENST00000347849 SPRED3Q2MJR0 410 aa22.86■■□□□ 1.25
PTPN18-202ENST00000347849 HSDL1Q3SXM5 330 aa22.86■■□□□ 1.25
PTPN18-202ENST00000347849 SLC17A8Q8NDX2 589 aa22.86■■□□□ 1.25
PTPN18-202ENST00000347849 RAPGEF5Q92565 580 aa22.86■■□□□ 1.25
PTPN18-202ENST00000347849 SEC16BQ96JE7 1060 aa22.86■■□□□ 1.25
PTPN18-202ENST00000347849 PORCNQ9H237 461 aa22.86■■□□□ 1.25
PTPN18-202ENST00000347849 DPH5Q9H2P9 285 aa22.86■■□□□ 1.25
PTPN18-202ENST00000347849 ACP6Q9NPH0 428 aa22.86■■□□□ 1.25
PTPN18-202ENST00000347849 DNM1LO00429 736 aa22.86■■□□□ 1.25
PTPN18-202ENST00000347849 CHUKO15111 745 aa22.86■■□□□ 1.25
PTPN18-202ENST00000347849 ZBTB48P10074 688 aaPredicted RBP22.86■■□□□ 1.25
PTPN18-202ENST00000347849 MYH9P35579 1960 aaKnown RBP22.86■■□□□ 1.25
PTPN18-202ENST00000347849 TCF7P36402 384 aaPredicted RBP22.86■■□□□ 1.25
PTPN18-202ENST00000347849 WNT7BP56706 349 aa22.86■■□□□ 1.25
PTPN18-202ENST00000347849 SNRPFP62306 86 aaKnown RBP22.86■■□□□ 1.25
PTPN18-202ENST00000347849 DHX9Q08211 1270 aaKnown RBP22.86■■□□□ 1.25
PTPN18-202ENST00000347849 PLCB4Q15147 1175 aa22.86■■□□□ 1.25
PTPN18-202ENST00000347849 CXorf56Q9H5V9 222 aa22.86■■□□□ 1.25
PTPN18-202ENST00000347849 LRRC4CQ9HCJ2 640 aa22.86■■□□□ 1.25
PTPN18-202ENST00000347849 TAS2R14Q9NYV8 317 aa22.86■■□□□ 1.25
PTPN18-202ENST00000347849 GLTPD2A6NH11 291 aa22.85■■□□□ 1.25
PTPN18-202ENST00000347849 CCDC188H7C350 402 aa22.85■■□□□ 1.25
PTPN18-202ENST00000347849 CDR1P51861 262 aa22.85■■□□□ 1.25
PTPN18-202ENST00000347849 RTP1P59025 263 aa22.85■■□□□ 1.25
PTPN18-202ENST00000347849 MKRN3Q13064 507 aaKnown RBP22.85■■□□□ 1.25
PTPN18-202ENST00000347849 DAAM2Q86T65 1068 aa22.85■■□□□ 1.25
PTPN18-202ENST00000347849 FBXO16Q8IX29 292 aaPredicted RBP22.85■■□□□ 1.25
PTPN18-202ENST00000347849 SLC20A1Q8WUM9 679 aa22.85■■□□□ 1.25
PTPN18-202ENST00000347849 COPS5Q92905 334 aa22.85■■□□□ 1.25
PTPN18-202ENST00000347849 HVCN1Q96D96 273 aa22.85■■□□□ 1.25
PTPN18-202ENST00000347849 IFT74Q96LB3 600 aa22.85■■□□□ 1.25
PTPN18-202ENST00000347849 FBXL18Q96ME1 805 aa22.85■■□□□ 1.25
PTPN18-202ENST00000347849 FAM213AQ9BRX8 229 aa22.85■■□□□ 1.25
PTPN18-202ENST00000347849 HAPLN2Q9GZV7 340 aa22.85■■□□□ 1.25
PTPN18-202ENST00000347849 BHMG1C9JSJ3 638 aaPredicted RBP22.85■■□□□ 1.25
PTPN18-202ENST00000347849 MAPK13O15264 365 aa22.85■■□□□ 1.25
PTPN18-202ENST00000347849 MARK3P27448 753 aa22.85■■□□□ 1.25
PTPN18-202ENST00000347849 RDXP35241 583 aaKnown RBP22.85■■□□□ 1.25
PTPN18-202ENST00000347849 MTMR3Q13615 1198 aa22.85■■□□□ 1.25
PTPN18-202ENST00000347849 KRT71Q3SY84 523 aa22.85■■□□□ 1.25
PTPN18-202ENST00000347849 LDLRAD1Q5T700 205 aa22.85■■□□□ 1.25
PTPN18-202ENST00000347849 CCDC26Q8TAB7 109 aa22.85■■□□□ 1.25
PTPN18-202ENST00000347849 BICD1Q96G01 975 aa22.85■■□□□ 1.25
PTPN18-202ENST00000347849 ZBTB45Q96K62 511 aaPredicted RBP22.85■■□□□ 1.25
PTPN18-202ENST00000347849 TRIM31Q9BZY9 425 aa22.85■■□□□ 1.25
PTPN18-202ENST00000347849 ATP2C2O75185 946 aa22.84■■□□□ 1.25
PTPN18-202ENST00000347849 STAT5BP51692 787 aa22.84■■□□□ 1.25
PTPN18-202ENST00000347849 AGBL2Q5U5Z8 902 aa22.84■■□□□ 1.25
PTPN18-202ENST00000347849 MAP1SQ66K74 1059 aaPredicted RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms