RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 SYT2Q8N9I0 419 aaPredicted RBP16.7■□□□□ 0.26
LRP8-202ENST00000347547 GBP5Q96PP8 586 aa16.7■□□□□ 0.26
LRP8-202ENST00000347547 REEP2Q9BRK0 252 aa16.7■□□□□ 0.26
LRP8-202ENST00000347547 ZWILCHQ9H900 591 aa16.7■□□□□ 0.26
LRP8-202ENST00000347547 LMCD1Q9NZU5 365 aa16.7■□□□□ 0.26
LRP8-202ENST00000347547 MYO3BQ8WXR4 1341 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 RASA4BC9J798 803 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 RASA4O43374 803 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 MED24O75448 989 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 ZWINTO95229 277 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 PENKP01210 267 aaPredicted RBP16.69■□□□□ 0.26
LRP8-202ENST00000347547 CHRNB2P17787 502 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 KCNQ4P56696 695 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 RCN1Q15293 331 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 TAF1BQ53T94 588 aaPredicted RBP16.69■□□□□ 0.26
LRP8-202ENST00000347547 SEPT14Q6ZU15 432 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 DZIP1Q86YF9 867 aaKnown RBP16.69■□□□□ 0.26
LRP8-202ENST00000347547 FAM186BQ8IYM0 893 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 EYA3Q99504 573 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 TRAIPQ9BWF2 469 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 INTS2Q9H0H0 1204 aaKnown RBP16.69■□□□□ 0.26
LRP8-202ENST00000347547 VCX3BQ9H321 246 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 VCX3AQ9NNX9 186 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 LARSQ9P2J5 1176 aaKnown RBP16.69■□□□□ 0.26
LRP8-202ENST00000347547 STX18Q9P2W9 335 aaKnown RBP16.69■□□□□ 0.26
LRP8-202ENST00000347547 ZNF212Q9UDV6 495 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 ASIC3Q9UHC3 531 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 ZFP69BQ9UJL9 534 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 SMG5Q9UPR3 1016 aaKnown RBP16.69■□□□□ 0.26
LRP8-202ENST00000347547 CREB3O43889 395 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 CCDC22O60826 627 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 FTLP02792 175 aaPredicted RBP16.69■□□□□ 0.26
LRP8-202ENST00000347547 HIBADHP31937 336 aaKnown RBP16.69■□□□□ 0.26
LRP8-202ENST00000347547 SF3B3Q15393 1217 aaKnown RBP16.69■□□□□ 0.26
LRP8-202ENST00000347547 PABPC1LQ4VXU2 614 aaKnown RBP16.69■□□□□ 0.26
LRP8-202ENST00000347547 TRABD2AQ86V40 505 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 GJA10Q969M2 543 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 VTI1AQ96AJ9 217 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 POP1Q99575 1024 aaKnown RBP16.69■□□□□ 0.26
LRP8-202ENST00000347547 CADM1Q9BY67 442 aaKnown RBP16.69■□□□□ 0.26
LRP8-202ENST00000347547 UBA5Q9GZZ9 404 aa16.69■□□□□ 0.26
LRP8-202ENST00000347547 TNRC6CQ9HCJ0 1690 aaKnown RBP16.68■□□□□ 0.26
LRP8-202ENST00000347547 GSTT1P30711 240 aa16.68■□□□□ 0.26
LRP8-202ENST00000347547 RANBP1P43487 201 aa16.68■□□□□ 0.26
LRP8-202ENST00000347547 ITGA8P53708 1063 aa16.68■□□□□ 0.26
LRP8-202ENST00000347547 PPP4CP60510 307 aa16.68■□□□□ 0.26
LRP8-202ENST00000347547 TNIP1Q15025 636 aa16.68■□□□□ 0.26
LRP8-202ENST00000347547 RFWD3Q6PCD5 774 aa16.68■□□□□ 0.26
LRP8-202ENST00000347547 C16orf86Q6ZW13 317 aa16.68■□□□□ 0.26
LRP8-202ENST00000347547 ZC3H18Q86VM9 953 aaKnown RBP16.68■□□□□ 0.26
LRP8-202ENST00000347547 TDRPQ86YL5 185 aa16.68■□□□□ 0.26
LRP8-202ENST00000347547 SEPT12Q8IYM1 358 aa16.68■□□□□ 0.26
LRP8-202ENST00000347547 PPFIBP2Q8ND30 876 aa16.68■□□□□ 0.26
LRP8-202ENST00000347547 MMADHCQ9H3L0 296 aaPredicted RBP16.68■□□□□ 0.26
LRP8-202ENST00000347547 SYNCQ9H7C4 482 aa16.68■□□□□ 0.26
LRP8-202ENST00000347547 SEPT11Q9NVA2 429 aaKnown RBP16.68■□□□□ 0.26
LRP8-202ENST00000347547 TBK1Q9UHD2 729 aa16.68■□□□□ 0.26
LRP8-202ENST00000347547 PHF24Q9UPV7 400 aa16.68■□□□□ 0.26
LRP8-202ENST00000347547 PCDHB13Q9Y5F0 798 aa16.68■□□□□ 0.26
LRP8-202ENST00000347547 NAV1Q8NEY1 1877 aa16.68■□□□□ 0.26
LRP8-202ENST00000347547 TMEM110-MUSTN1A8MSY1 372 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 USP17L5A8MUK1 530 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 PSMG1O95456 288 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 KLRK1P26718 216 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 RFC4P35249 363 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 MESDQ14696 234 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 ERFEQ4G0M1 354 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 ASPRV1Q53RT3 343 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 NLRP9Q7RTR0 991 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 CLNKQ7Z7G1 428 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 GRK7Q8WTQ7 553 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 OPTNQ96CV9 577 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 BTBD10Q9BSF8 475 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 SLCO1B3Q9NPD5 702 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 SENP1Q9P0U3 644 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 TGFB1I1O43294 461 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 SH3BGRP55822 239 aaPredicted RBP16.67■□□□□ 0.26
LRP8-202ENST00000347547 ACSBG2Q5FVE4 666 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 RC3H1Q5TC82 1133 aaKnown RBP16.67■□□□□ 0.26
LRP8-202ENST00000347547 DSTYKQ6XUX3 929 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 PSPC1Q8WXF1 523 aaKnown RBP16.67■□□□□ 0.26
LRP8-202ENST00000347547 PAIP2Q9BPZ3 127 aaKnown RBP16.67■□□□□ 0.26
LRP8-202ENST00000347547 UBE2OQ9C0C9 1292 aaKnown RBP16.67■□□□□ 0.26
LRP8-202ENST00000347547 ATXN10Q9UBB4 475 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 UBR3Q6ZT12 1888 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 ZMYM2Q9UBW7 1377 aa16.67■□□□□ 0.26
LRP8-202ENST00000347547 A0A1W2PRG0 241 aa16.66■□□□□ 0.26
LRP8-202ENST00000347547 CAPN9O14815 690 aa16.66■□□□□ 0.26
LRP8-202ENST00000347547 RGL2O15211 777 aa16.66■□□□□ 0.26
LRP8-202ENST00000347547 EIF3DO15371 548 aaKnown RBP eCLIP16.66■□□□□ 0.26
LRP8-202ENST00000347547 MAP3K7O43318 606 aa16.66■□□□□ 0.26
LRP8-202ENST00000347547 IMPDH2P12268 514 aa16.66■□□□□ 0.26
LRP8-202ENST00000347547 SERPINB4P48594 390 aa16.66■□□□□ 0.26
LRP8-202ENST00000347547 CDK8P49336 464 aa16.66■□□□□ 0.26
LRP8-202ENST00000347547 SESN3P58005 492 aa16.66■□□□□ 0.26
LRP8-202ENST00000347547 UBE2SQ16763 222 aa16.66■□□□□ 0.26
LRP8-202ENST00000347547 SGO2Q562F6 1265 aa16.66■□□□□ 0.26
LRP8-202ENST00000347547 POTEGQ6S5H5 508 aa16.66■□□□□ 0.26
LRP8-202ENST00000347547 CEP128Q6ZU80 1094 aa16.66■□□□□ 0.26
LRP8-202ENST00000347547 SPOCK2Q92563 424 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms