RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 MBD4O95243 580 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 HSPA8P11142 646 aaKnown RBP8.14□□□□□ -1.11
LIN28B-201ENST00000345080 ATP1A3P13637 1013 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 GYS1P13807 737 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 RFC5P40937 340 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 ARPP19P56211 112 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 SLC12A1Q13621 1099 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 HIC1Q14526 733 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 HAUS6Q7Z4H7 955 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 MAGEB6Q8N7X4 407 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 TC2NQ8N9U0 490 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 GIMAP8Q8ND71 665 aaPredicted RBP8.14□□□□□ -1.11
LIN28B-201ENST00000345080 ATL2Q8NHH9 583 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 KIFC2Q96AC6 838 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 ZKSCAN3Q9BRR0 538 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 PTPRUQ92729 1446 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 DIP2AQ14689 1571 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 PHF20L1A8MW92 1017 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 RAD17O75943 681 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 PDE9AO76083 593 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 ALOX15P16050 662 aaPredicted RBP8.14□□□□□ -1.11
LIN28B-201ENST00000345080 TTKP33981 857 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 EHHADHQ08426 723 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 PPIDQ08752 370 aaKnown RBP8.14□□□□□ -1.11
LIN28B-201ENST00000345080 CNGA3Q16281 694 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 RSBN1Q5VWQ0 802 aaPredicted RBP8.14□□□□□ -1.11
LIN28B-201ENST00000345080 EPM2AIP1Q7L775 607 aaPredicted RBP8.14□□□□□ -1.11
LIN28B-201ENST00000345080 RASSF5Q8WWW0 418 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 GLG1Q92896 1179 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 CNBD2Q96M20 576 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 PRMT1Q99873 361 aaKnown RBP8.14□□□□□ -1.11
LIN28B-201ENST00000345080 UBXN6Q9BZV1 441 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 SEL1LQ9UBV2 794 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 MYOM1P52179 1685 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 PRDM1O75626 825 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 CLPTM1O96005 669 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 RPN1P04843 607 aaKnown RBP8.14□□□□□ -1.11
LIN28B-201ENST00000345080 MYCLP12524 364 aaPredicted RBP8.14□□□□□ -1.11
LIN28B-201ENST00000345080 EPHB1P54762 984 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 C16orf72Q14CZ0 275 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 TMEM63BQ5T3F8 832 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 SYDE1Q6ZW31 735 aaPredicted RBP8.14□□□□□ -1.11
LIN28B-201ENST00000345080 ZBTB8OSQ8IWT0 167 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 SH2D3CQ8N5H7 860 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.14□□□□□ -1.11
LIN28B-201ENST00000345080 CDHR1Q96JP9 859 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 EBF2Q9HAK2 575 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 SPATA2Q9UM82 520 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 SYNGAP1Q96PV0 1343 aa8.14□□□□□ -1.11
LIN28B-201ENST00000345080 RNF103-CHMP3A0A140T963 221 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 CNOT3O75175 753 aaKnown RBP8.13□□□□□ -1.11
LIN28B-201ENST00000345080 LARGE1O95461 756 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 IDO1P14902 403 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 ATF4P18848 351 aaPredicted RBP8.13□□□□□ -1.11
LIN28B-201ENST00000345080 PTPN4P29074 926 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 ARFIP2P53365 341 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 SEC24CP53992 1094 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 ZNF174Q15697 407 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 PARP6Q2NL67 630 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 TJAP1Q5JTD0 557 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 NSMFQ6X4W1 530 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 CHST3Q7LGC8 479 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 HDAC2Q92769 488 aaKnown RBP8.13□□□□□ -1.11
LIN28B-201ENST00000345080 LRRC1Q9BTT6 524 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 TRPV6Q9H1D0 765 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 MRPL44Q9H9J2 332 aaKnown RBP8.13□□□□□ -1.11
LIN28B-201ENST00000345080 GGT7Q9UJ14 662 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 RBMX2Q9Y388 322 aaKnown RBP8.13□□□□□ -1.11
LIN28B-201ENST00000345080 DIP2BQ9P265 1576 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 POC1B-GALNT4F8VUJ3 575 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 BUB1O43683 1085 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 MMP1P03956 469 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 PRMT2P55345 433 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 UNC13DQ70J99 1090 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 DPH6Q7L8W6 267 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 ZNF654Q8IZM8 581 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 GIPC2Q8TF65 315 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 CCDC17Q96LX7 622 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 TINF2Q9BSI4 451 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 UPF3AQ9H1J1 476 aaKnown RBP8.13□□□□□ -1.11
LIN28B-201ENST00000345080 PRDM16Q9HAZ2 1276 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 BLOC1S6Q9UL45 172 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 ASB14A6NK59 587 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 MIF4GDA9UHW6 222 aaKnown RBP8.13□□□□□ -1.11
LIN28B-201ENST00000345080 GPC4O75487 556 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 TNFAIP8O95379 198 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 HOXC6P09630 235 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 TRMT5Q32P41 509 aaKnown RBP8.13□□□□□ -1.11
LIN28B-201ENST00000345080 SPATA5Q8NB90 893 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 AGAP11Q8TF27 550 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 B3GALT6Q96L58 329 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 ZNF184Q99676 751 aaPredicted RBP8.13□□□□□ -1.11
LIN28B-201ENST00000345080 TUBGCP2Q9BSJ2 902 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 MAP3K20Q9NYL2 800 aaKnown RBP8.13□□□□□ -1.11
LIN28B-201ENST00000345080 LIMA1Q9UHB6 759 aaKnown RBP8.13□□□□□ -1.11
LIN28B-201ENST00000345080 TUBE1Q9UJT0 475 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 FAM25AB3EWG3 89 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 FAM25CB3EWG5 89 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 FAM25GB3EWG6 89 aa8.13□□□□□ -1.11
LIN28B-201ENST00000345080 TCP11X1B4DZS4 312 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms