RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 TCP11X1B4DZS4 312 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 ITGA4P13612 1032 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 KLHL38Q2WGJ6 581 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 Q3C1V9 767 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 LRRC55Q6ZSA7 311 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 MYCBPAPQ8TBZ2 947 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 MDM1Q8TC05 714 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 TNFRSF25Q93038 417 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 TUBB6Q9BUF5 446 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 TARS2Q9BW92 718 aaKnown RBP7.63□□□□□ -1.19
VCAN-202ENST00000342785 SMYD2Q9NRG4 433 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 PPARGC1AQ9UBK2 798 aaKnown RBP7.63□□□□□ -1.19
VCAN-202ENST00000342785 PBX1P40424 430 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 EFNA5P52803 228 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 ATG4CQ96DT6 458 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 UNC45AQ9H3U1 944 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 ANKEF1Q9NU02 776 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 RCCD1A6NED2 376 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 SPAG7O75391 227 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 GPC3P51654 580 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 NCOA4Q13772 614 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 RSBN1LQ6PCB5 846 aaPredicted RBP7.63□□□□□ -1.19
VCAN-202ENST00000342785 KDM7AQ6ZMT4 941 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 ACTRT1Q8TDG2 376 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 N4BP2L2Q92802 583 aaPredicted RBP7.63□□□□□ -1.19
VCAN-202ENST00000342785 NACA2Q9H009 215 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 MAGED2Q9UNF1 606 aaPredicted RBP7.63□□□□□ -1.19
VCAN-202ENST00000342785 FAM86B1E9PN63 330 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 F8VZ95 297 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 M0QYV0 167 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 GMNNO75496 209 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 FAM86B2P0C5J1 330 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 CA8P35219 290 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 FAM102AQ5T9C2 384 aaPredicted RBP7.63□□□□□ -1.19
VCAN-202ENST00000342785 SPATA21Q7Z572 469 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 SEC16BQ96JE7 1060 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 GTPBP10A4D1E9 387 aaKnown RBP7.63□□□□□ -1.19
VCAN-202ENST00000342785 PHKA2P46019 1235 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 IREB2P48200 963 aaKnown RBP7.63□□□□□ -1.19
VCAN-202ENST00000342785 AP3M2P53677 418 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 RASIP1Q5U651 963 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 SIX6OS1Q8N1H7 587 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 RPS6KC1Q96S38 1066 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 TRABDQ9H4I3 376 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 SPC25Q9HBM1 224 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 LCMT1Q9UIC8 334 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 SERPINB6P35237 376 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 COILP38432 576 aaPredicted RBP7.63□□□□□ -1.19
VCAN-202ENST00000342785 CDH6P55285 790 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 RPS6KA2Q15349 733 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 ZC3H18Q86VM9 953 aaKnown RBP7.63□□□□□ -1.19
VCAN-202ENST00000342785 FBXO41Q8TF61 875 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 PRMT1Q99873 361 aaKnown RBP7.63□□□□□ -1.19
VCAN-202ENST00000342785 MOV10L1Q9BXT6 1211 aaKnown RBP7.63□□□□□ -1.19
VCAN-202ENST00000342785 C2orf40Q9H1Z8 148 aa7.63□□□□□ -1.19
VCAN-202ENST00000342785 TMEM120BA0PK00 339 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 PJA2O43164 708 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 FGRP09769 529 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 TAL1P17542 331 aaPredicted RBP7.62□□□□□ -1.19
VCAN-202ENST00000342785 OSBPP22059 807 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 TPD52P55327 224 aaPredicted RBP7.62□□□□□ -1.19
VCAN-202ENST00000342785 ERVK-9P63128 1117 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 PRKCEQ02156 737 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 DRP2Q13474 957 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 C18orf8Q96DM3 657 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 DDX23Q9BUQ8 820 aaKnown RBP7.62□□□□□ -1.19
VCAN-202ENST00000342785 SENP1Q9P0U3 644 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 TLK1Q9UKI8 766 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 PRDM4Q9UKN5 801 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 G3BP2Q9UN86 482 aaKnown RBP7.62□□□□□ -1.19
VCAN-202ENST00000342785 ARL2BPQ9Y2Y0 163 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 TMX2Q9Y320 296 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 GZMAP12544 262 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 NOP14P78316 857 aaKnown RBP7.62□□□□□ -1.19
VCAN-202ENST00000342785 HIF1AQ16665 826 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 P3H1Q32P28 736 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 C2CD6Q53TS8 623 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 ATG16L1Q676U5 607 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 RAPH1Q70E73 1250 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 PARP9Q8IXQ6 854 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 FGFR1OP2Q9NVK5 253 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 DDX3XO00571 662 aaKnown RBP eCLIP7.62□□□□□ -1.19
VCAN-202ENST00000342785 HAUS5O94927 633 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 MKRN3Q13064 507 aaKnown RBP7.62□□□□□ -1.19
VCAN-202ENST00000342785 MIIPQ5JXC2 388 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 SYDE1Q6ZW31 735 aaPredicted RBP7.62□□□□□ -1.19
VCAN-202ENST00000342785 ARMCX2Q7L311 632 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 WDR75Q8IWA0 830 aaKnown RBP7.62□□□□□ -1.19
VCAN-202ENST00000342785 C4orf33Q8N1A6 199 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 HAS1Q92839 578 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 CAVIN3Q969G5 261 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 MMTAG2Q9BU76 263 aaKnown RBP7.62□□□□□ -1.19
VCAN-202ENST00000342785 REXO2Q9Y3B8 237 aaKnown RBP7.62□□□□□ -1.19
VCAN-202ENST00000342785 GYG2O15488 501 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 MAFGO15525 162 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 ATP5HO75947 161 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 SGPL1O95470 568 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 MRPS9P82933 396 aaKnown RBP7.62□□□□□ -1.19
VCAN-202ENST00000342785 Q4G0T1 1027 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 APOBEC3HQ6NTF7 200 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms