RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 PPP2R3AQ06190 1150 aa20.94■□□□□ 0.94
SYNE4-202ENST00000340477 HYAL1Q12794 435 aa20.94■□□□□ 0.94
SYNE4-202ENST00000340477 HSP90AA2PQ14568 343 aaPredicted RBP20.94■□□□□ 0.94
SYNE4-202ENST00000340477 POSTNQ15063 836 aa20.94■□□□□ 0.94
SYNE4-202ENST00000340477 GLRA4Q5JXX5 417 aa20.94■□□□□ 0.94
SYNE4-202ENST00000340477 UNC13DQ70J99 1090 aa20.94■□□□□ 0.94
SYNE4-202ENST00000340477 RBM23Q86U06 439 aaKnown RBP20.94■□□□□ 0.94
SYNE4-202ENST00000340477 UROC1Q96N76 676 aa20.94■□□□□ 0.94
SYNE4-202ENST00000340477 ZBP1Q9H171 429 aa20.94■□□□□ 0.94
SYNE4-202ENST00000340477 TMEM206Q9H813 350 aa20.94■□□□□ 0.94
SYNE4-202ENST00000340477 HPSEQ9Y251 543 aa20.94■□□□□ 0.94
SYNE4-202ENST00000340477 SSX2IPQ9Y2D8 614 aa20.94■□□□□ 0.94
SYNE4-202ENST00000340477 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.94■□□□□ 0.94
SYNE4-202ENST00000340477 PDCD11Q14690 1871 aaKnown RBP20.94■□□□□ 0.94
SYNE4-202ENST00000340477 CASTOR2A6NHX0 329 aa20.93■□□□□ 0.94
SYNE4-202ENST00000340477 TADA2AO75478 443 aa20.93■□□□□ 0.94
SYNE4-202ENST00000340477 PPP1R37O75864 691 aa20.93■□□□□ 0.94
SYNE4-202ENST00000340477 MYL1P05976 194 aa20.93■□□□□ 0.94
SYNE4-202ENST00000340477 URODP06132 367 aa20.93■□□□□ 0.94
SYNE4-202ENST00000340477 FAM26FQ5R3K3 315 aa20.93■□□□□ 0.94
SYNE4-202ENST00000340477 KIAA1841Q6NSI8 718 aa20.93■□□□□ 0.94
SYNE4-202ENST00000340477 BCL7CQ8WUZ0 217 aaPredicted RBP20.93■□□□□ 0.94
SYNE4-202ENST00000340477 POMGNT1Q8WZA1 660 aa20.93■□□□□ 0.94
SYNE4-202ENST00000340477 CCDC47Q96A33 483 aaKnown RBP20.93■□□□□ 0.94
SYNE4-202ENST00000340477 BLZF1Q9H2G9 400 aa20.93■□□□□ 0.94
SYNE4-202ENST00000340477 RPF1Q9H9Y2 349 aaKnown RBP20.93■□□□□ 0.94
SYNE4-202ENST00000340477 PLEKHA5Q9HAU0 1116 aa20.93■□□□□ 0.94
SYNE4-202ENST00000340477 MARCH5Q9NX47 278 aa20.93■□□□□ 0.94
SYNE4-202ENST00000340477 CNTN3Q9P232 1028 aa20.93■□□□□ 0.94
SYNE4-202ENST00000340477 ADAM28Q9UKQ2 775 aa20.93■□□□□ 0.94
SYNE4-202ENST00000340477 PCDHGC5Q9Y5F6 944 aa20.93■□□□□ 0.94
SYNE4-202ENST00000340477 SF3B1O75533 1304 aaKnown RBP eCLIP20.93■□□□□ 0.94
SYNE4-202ENST00000340477 A0A0B4J269 797 aa20.92■□□□□ 0.94
SYNE4-202ENST00000340477 SMIM28A0A1B0GU29 152 aa20.92■□□□□ 0.94
SYNE4-202ENST00000340477 PVALEFA0A1B0GWK0 134 aa20.92■□□□□ 0.94
SYNE4-202ENST00000340477 ACTN4O43707 911 aaKnown RBP20.92■□□□□ 0.94
SYNE4-202ENST00000340477 CXCL14O95715 111 aa20.92■□□□□ 0.94
SYNE4-202ENST00000340477 SOD2P04179 222 aa20.92■□□□□ 0.94
SYNE4-202ENST00000340477 MYBP10242 640 aa20.92■□□□□ 0.94
SYNE4-202ENST00000340477 CTSAP10619 480 aa20.92■□□□□ 0.94
SYNE4-202ENST00000340477 KCNA5P22460 613 aa20.92■□□□□ 0.94
SYNE4-202ENST00000340477 NDUFV1P49821 464 aa20.92■□□□□ 0.94
SYNE4-202ENST00000340477 NDUFA8P51970 172 aa20.92■□□□□ 0.94
SYNE4-202ENST00000340477 ADGRD2Q7Z7M1 963 aa20.92■□□□□ 0.94
SYNE4-202ENST00000340477 EFHBQ8N7U6 833 aa20.92■□□□□ 0.94
SYNE4-202ENST00000340477 PPP1R10Q96QC0 940 aaKnown RBP20.92■□□□□ 0.94
SYNE4-202ENST00000340477 HERC2P3Q9BVR0 1158 aa20.92■□□□□ 0.94
SYNE4-202ENST00000340477 MRPL17Q9NRX2 175 aaKnown RBP20.92■□□□□ 0.94
SYNE4-202ENST00000340477 FAM237AA0A1B0GTK4 181 aa20.91■□□□□ 0.94
SYNE4-202ENST00000340477 EIF3DO15371 548 aaKnown RBP eCLIP20.91■□□□□ 0.94
SYNE4-202ENST00000340477 XPOTO43592 962 aaKnown RBP20.91■□□□□ 0.94
SYNE4-202ENST00000340477 UBE4BO95155 1302 aa20.91■□□□□ 0.94
SYNE4-202ENST00000340477 CXCL8P10145 99 aa20.91■□□□□ 0.94
SYNE4-202ENST00000340477 KCNE1P15382 129 aa20.91■□□□□ 0.94
SYNE4-202ENST00000340477 ELAVL2Q12926 359 aaKnown RBP20.91■□□□□ 0.94
SYNE4-202ENST00000340477 DUSP6Q16828 381 aa20.91■□□□□ 0.94
SYNE4-202ENST00000340477 SEZ6Q53EL9 994 aa20.91■□□□□ 0.94
SYNE4-202ENST00000340477 XKR4Q5GH76 650 aa20.91■□□□□ 0.94
SYNE4-202ENST00000340477 TJAP1Q5JTD0 557 aa20.91■□□□□ 0.94
SYNE4-202ENST00000340477 FUT10Q6P4F1 479 aa20.91■□□□□ 0.94
SYNE4-202ENST00000340477 MRPL43Q8N983 215 aaKnown RBP20.91■□□□□ 0.94
SYNE4-202ENST00000340477 DDX27Q96GQ7 796 aaKnown RBP20.91■□□□□ 0.94
SYNE4-202ENST00000340477 PAGE5Q96GU1 130 aa20.91■□□□□ 0.94
SYNE4-202ENST00000340477 ASB2Q96Q27 587 aa20.91■□□□□ 0.94
SYNE4-202ENST00000340477 STRA6Q9BX79 667 aa20.91■□□□□ 0.94
SYNE4-202ENST00000340477 EMILIN2Q9BXX0 1053 aa20.91■□□□□ 0.94
SYNE4-202ENST00000340477 BRWD1Q9NSI6 2320 aa20.91■□□□□ 0.94
SYNE4-202ENST00000340477 EXOC1Q9NV70 894 aa20.91■□□□□ 0.94
SYNE4-202ENST00000340477 CHMP5Q9NZZ3 219 aa20.91■□□□□ 0.94
SYNE4-202ENST00000340477 AGO2Q9UKV8 859 aaKnown RBP20.91■□□□□ 0.94
SYNE4-202ENST00000340477 PRUNE2Q8WUY3 3088 aa20.9■□□□□ 0.94
SYNE4-202ENST00000340477 C2orf71A6NGG8 1288 aa20.9■□□□□ 0.94
SYNE4-202ENST00000340477 HIDE1A8MVS5 230 aa20.9■□□□□ 0.94
SYNE4-202ENST00000340477 GLUD2P49448 558 aa20.9■□□□□ 0.94
SYNE4-202ENST00000340477 CASP5P51878 434 aa20.9■□□□□ 0.94
SYNE4-202ENST00000340477 TFF2Q03403 129 aa20.9■□□□□ 0.94
SYNE4-202ENST00000340477 CUL4BQ13620 913 aa20.9■□□□□ 0.94
SYNE4-202ENST00000340477 SLC39A4Q6P5W5 647 aa20.9■□□□□ 0.94
SYNE4-202ENST00000340477 ALKAL1Q6UXT8 129 aa20.9■□□□□ 0.94
SYNE4-202ENST00000340477 CD302Q8IX05 232 aa20.9■□□□□ 0.94
SYNE4-202ENST00000340477 TSPAN18Q96SJ8 248 aa20.9■□□□□ 0.94
SYNE4-202ENST00000340477 HAPLN2Q9GZV7 340 aa20.9■□□□□ 0.94
SYNE4-202ENST00000340477 FAM50BQ9Y247 325 aa20.9■□□□□ 0.94
SYNE4-202ENST00000340477 IRAK3Q9Y616 596 aa20.9■□□□□ 0.94
SYNE4-202ENST00000340477 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.89■□□□□ 0.93
SYNE4-202ENST00000340477 ANKRD63C9JTQ0 380 aa20.89■□□□□ 0.93
SYNE4-202ENST00000340477 PER2O15055 1255 aa20.89■□□□□ 0.93
SYNE4-202ENST00000340477 TRAPPC3O43617 180 aa20.89■□□□□ 0.93
SYNE4-202ENST00000340477 PRPF6O94906 941 aaKnown RBP20.89■□□□□ 0.93
SYNE4-202ENST00000340477 CREMQ03060 361 aa20.89■□□□□ 0.93
SYNE4-202ENST00000340477 COL19A1Q14993 1142 aa20.89■□□□□ 0.93
SYNE4-202ENST00000340477 NAB2Q15742 525 aa20.89■□□□□ 0.93
SYNE4-202ENST00000340477 USP41Q3LFD5 358 aa20.89■□□□□ 0.93
SYNE4-202ENST00000340477 PUS10Q3MIT2 529 aaKnown RBP20.89■□□□□ 0.93
SYNE4-202ENST00000340477 KANK3Q6NY19 840 aa20.89■□□□□ 0.93
SYNE4-202ENST00000340477 GRAMD1CQ8IYS0 662 aa20.89■□□□□ 0.93
SYNE4-202ENST00000340477 FAM212AQ96EL1 285 aa20.89■□□□□ 0.93
SYNE4-202ENST00000340477 KIF12Q96FN5 646 aa20.89■□□□□ 0.93
SYNE4-202ENST00000340477 STYXL1Q9Y6J8 313 aa20.89■□□□□ 0.93
SYNE4-202ENST00000340477 REV3LO60673 3130 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms