RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 FEM1BQ9UK73 627 aa12.41□□□□□ -0.42
SHANK2-201ENST00000338508 A0A087WUV0 522 aaPredicted RBP12.41□□□□□ -0.42
SHANK2-201ENST00000338508 ESYT3A0FGR9 886 aa12.41□□□□□ -0.42
SHANK2-201ENST00000338508 KIF28PB7ZC32 967 aa12.41□□□□□ -0.42
SHANK2-201ENST00000338508 EIF3EP60228 445 aaKnown RBP12.41□□□□□ -0.42
SHANK2-201ENST00000338508 SLC44A5Q8NCS7 719 aa12.41□□□□□ -0.42
SHANK2-201ENST00000338508 ZNF280CQ8ND82 737 aa12.41□□□□□ -0.42
SHANK2-201ENST00000338508 SSH3Q8TE77 659 aa12.41□□□□□ -0.42
SHANK2-201ENST00000338508 ACTR5Q9H9F9 607 aaPredicted RBP12.41□□□□□ -0.42
SHANK2-201ENST00000338508 LSM7Q9UK45 103 aaKnown RBP12.41□□□□□ -0.42
SHANK2-201ENST00000338508 DGKIO75912 1065 aa12.41□□□□□ -0.42
SHANK2-201ENST00000338508 ANO5Q75V66 913 aa12.41□□□□□ -0.42
SHANK2-201ENST00000338508 HORMAD1Q86X24 394 aa12.41□□□□□ -0.42
SHANK2-201ENST00000338508 FAM167AQ96KS9 214 aa12.41□□□□□ -0.42
SHANK2-201ENST00000338508 CTTNBP2Q8WZ74 1663 aa12.41□□□□□ -0.42
SHANK2-201ENST00000338508 NPHP3-ACAD11A0A0J9YXS1 232 aa12.41□□□□□ -0.42
SHANK2-201ENST00000338508 APRTP07741 180 aa12.41□□□□□ -0.42
SHANK2-201ENST00000338508 OR1G1P47890 313 aa12.41□□□□□ -0.42
SHANK2-201ENST00000338508 TEDDM1Q5T9Z0 273 aa12.41□□□□□ -0.42
SHANK2-201ENST00000338508 TBX22Q9Y458 520 aa12.41□□□□□ -0.42
SHANK2-201ENST00000338508 MLH3Q9UHC1 1453 aa12.41□□□□□ -0.42
SHANK2-201ENST00000338508 SNAP23O00161 211 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 ATP1A3P13637 1013 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 HSD17B4P51659 736 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 TRIM32Q13049 653 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 ARHGAP17Q68EM7 881 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 PTRHD1Q6GMV3 140 aaKnown RBP12.4□□□□□ -0.42
SHANK2-201ENST00000338508 PPP2R3CQ969Q6 453 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 PAPOLBQ9NRJ5 636 aaKnown RBP12.4□□□□□ -0.42
SHANK2-201ENST00000338508 BFARQ9NZS9 450 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 PCDHB8Q9UN66 801 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 PHLPP2Q6ZVD8 1323 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 BLMP54132 1417 aaPredicted RBP12.4□□□□□ -0.42
SHANK2-201ENST00000338508 ALDH1A2O94788 518 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 MLNP12872 115 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 CDC25BP30305 580 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 CDC16Q13042 620 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 NFRKBQ6P4R8 1299 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 SYNE4Q8N205 404 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 GALNT4Q8N4A0 578 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 MCPH1Q8NEM0 835 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 SLC30A5Q8TAD4 765 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 MASTLQ96GX5 879 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 RANBP1P43487 201 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 DRAP1Q14919 205 aaPredicted RBP12.4□□□□□ -0.42
SHANK2-201ENST00000338508 CNGA3Q16281 694 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 RNF149Q8NC42 400 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 RIN3Q8TB24 985 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 OSBPL1AQ9BXW6 950 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 POLRMTO00411 1230 aaKnown RBP12.4□□□□□ -0.42
SHANK2-201ENST00000338508 P4HA2O15460 535 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 PRPF3O43395 683 aaKnown RBP12.4□□□□□ -0.42
SHANK2-201ENST00000338508 BRAFP15056 766 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 PHKG1Q16816 387 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 ENAHQ8N8S7 591 aaPredicted RBP12.4□□□□□ -0.42
SHANK2-201ENST00000338508 TRIM8Q9BZR9 551 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 PIH1D3Q9NQM4 214 aaKnown RBP12.4□□□□□ -0.42
SHANK2-201ENST00000338508 RASSF9O75901 435 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 ZRANB3Q5FWF4 1079 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 NSUN6Q8TEA1 469 aaKnown RBP12.4□□□□□ -0.42
SHANK2-201ENST00000338508 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.4□□□□□ -0.42
SHANK2-201ENST00000338508 RPAP3Q9H6T3 665 aaPredicted RBP12.4□□□□□ -0.42
SHANK2-201ENST00000338508 ABCC10Q5T3U5 1492 aa12.4□□□□□ -0.42
SHANK2-201ENST00000338508 TBC1D4O60343 1298 aa12.4□□□□□ -0.43
SHANK2-201ENST00000338508 C6orf222P0C671 652 aaPredicted RBP12.4□□□□□ -0.43
SHANK2-201ENST00000338508 GYS1P13807 737 aa12.4□□□□□ -0.43
SHANK2-201ENST00000338508 DDX5P17844 614 aaKnown RBP12.4□□□□□ -0.43
SHANK2-201ENST00000338508 GGCXP38435 758 aa12.4□□□□□ -0.43
SHANK2-201ENST00000338508 RAD23BP54727 409 aa12.4□□□□□ -0.43
SHANK2-201ENST00000338508 CCDC81Q6ZN84 652 aa12.4□□□□□ -0.43
SHANK2-201ENST00000338508 TRIM62Q9BVG3 475 aa12.4□□□□□ -0.43
SHANK2-201ENST00000338508 NDE1Q9NXR1 346 aa12.4□□□□□ -0.43
SHANK2-201ENST00000338508 CAPN1P07384 714 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 SHCBP1Q8NEM2 672 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 ASAP3Q8TDY4 903 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 CLCN6P51797 869 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 MAPRE1Q15691 268 aaKnown RBP12.39□□□□□ -0.43
SHANK2-201ENST00000338508 LAYNQ6UX15 382 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 NLRP10Q86W26 655 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 SH3TC2Q8TF17 1288 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 L3MBTL3Q96JM7 780 aaPredicted RBP12.39□□□□□ -0.43
SHANK2-201ENST00000338508 KIAA0232Q92628 1395 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 CHGBP05060 677 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 IL6STP40189 918 aaPredicted RBP12.39□□□□□ -0.43
SHANK2-201ENST00000338508 COASYQ13057 564 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 GRAPQ13588 217 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 E4F1Q66K89 784 aaPredicted RBP12.39□□□□□ -0.43
SHANK2-201ENST00000338508 SARM1Q6SZW1 724 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 GRAPLQ8TC17 118 aaPredicted RBP12.39□□□□□ -0.43
SHANK2-201ENST00000338508 LXNQ9BS40 222 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 ZFATQ9P243 1243 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 SEPT12Q8IYM1 358 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 CPA5Q8WXQ8 436 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 ZNF335Q9H4Z2 1342 aaPredicted RBP12.39□□□□□ -0.43
SHANK2-201ENST00000338508 TRIM49P0CI25 452 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 TRIM49CP0CI26 452 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 FUT11Q495W5 492 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 SUSD4Q5VX71 490 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 PPP4R3CPQ6ZMV5 832 aa12.39□□□□□ -0.43
SHANK2-201ENST00000338508 KRT78Q8N1N4 520 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms