RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 PPP1R15BQ5SWA1 713 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 ATL2Q8NHH9 583 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 VWDEQ8N2E2 1590 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.02□□□□□ -0.16
COL2A1-201ENST00000337299 WDR64B1ANS9 1081 aa14.02□□□□□ -0.16
COL2A1-201ENST00000337299 SORBS3O60504 671 aa14.02□□□□□ -0.16
COL2A1-201ENST00000337299 MCF2P10911 925 aa14.02□□□□□ -0.16
COL2A1-201ENST00000337299 KRT10P13645 584 aa14.02□□□□□ -0.16
COL2A1-201ENST00000337299 VEGFAP15692 232 aaPredicted RBP14.02□□□□□ -0.16
COL2A1-201ENST00000337299 BTDP43251 543 aa14.02□□□□□ -0.16
COL2A1-201ENST00000337299 PRPF39Q86UA1 669 aaKnown RBP14.02□□□□□ -0.16
COL2A1-201ENST00000337299 CPXCR1Q8N123 301 aa14.02□□□□□ -0.16
COL2A1-201ENST00000337299 GLIS3Q8NEA6 775 aa14.02□□□□□ -0.16
COL2A1-201ENST00000337299 CNKSR2Q8WXI2 1034 aa14.02□□□□□ -0.16
COL2A1-201ENST00000337299 APOL6Q9BWW8 343 aa14.02□□□□□ -0.16
COL2A1-201ENST00000337299 DLC1Q96QB1 1528 aa14.02□□□□□ -0.16
COL2A1-201ENST00000337299 KRT37O76014 449 aa14.02□□□□□ -0.16
COL2A1-201ENST00000337299 PGM3O95394 542 aa14.02□□□□□ -0.16
COL2A1-201ENST00000337299 KRT19P08727 400 aa14.02□□□□□ -0.16
COL2A1-201ENST00000337299 HOXA13P31271 388 aaPredicted RBP14.02□□□□□ -0.16
COL2A1-201ENST00000337299 R3HDM1Q15032 1099 aaKnown RBP14.02□□□□□ -0.16
COL2A1-201ENST00000337299 CCDC14Q49A88 953 aa14.02□□□□□ -0.16
COL2A1-201ENST00000337299 MFSD4BQ5TF39 518 aa14.02□□□□□ -0.16
COL2A1-201ENST00000337299 BRIP1Q9BX63 1249 aa14.02□□□□□ -0.16
COL2A1-201ENST00000337299 GLT8D2Q9H1C3 349 aa14.02□□□□□ -0.16
COL2A1-201ENST00000337299 RMI1Q9H9A7 625 aa14.02□□□□□ -0.16
COL2A1-201ENST00000337299 DBNDD1Q9H9R9 158 aa14.02□□□□□ -0.16
COL2A1-201ENST00000337299 WARS2Q9UGM6 360 aaKnown RBP14.02□□□□□ -0.16
COL2A1-201ENST00000337299 AGAP1Q9UPQ3 857 aa14.02□□□□□ -0.16
COL2A1-201ENST00000337299 CEP170BQ9Y4F5 1589 aaPredicted RBP14.02□□□□□ -0.17
COL2A1-201ENST00000337299 SMIM22K7EJ46 135 aa14.02□□□□□ -0.17
COL2A1-201ENST00000337299 PTENP60484 403 aa14.02□□□□□ -0.17
COL2A1-201ENST00000337299 EPC2Q52LR7 807 aa14.02□□□□□ -0.17
COL2A1-201ENST00000337299 C2CD6Q53TS8 623 aa14.02□□□□□ -0.17
COL2A1-201ENST00000337299 KRT27Q7Z3Y8 459 aa14.02□□□□□ -0.17
COL2A1-201ENST00000337299 PCGF5Q86SE9 256 aa14.02□□□□□ -0.17
COL2A1-201ENST00000337299 SESTD1Q86VW0 696 aa14.02□□□□□ -0.17
COL2A1-201ENST00000337299 SLC13A5Q86YT5 568 aaPredicted RBP14.02□□□□□ -0.17
COL2A1-201ENST00000337299 MAGEC3Q8TD91 643 aa14.02□□□□□ -0.17
COL2A1-201ENST00000337299 ARHGEF1Q92888 912 aaKnown RBP14.02□□□□□ -0.17
COL2A1-201ENST00000337299 TECPR2O15040 1411 aa14.02□□□□□ -0.17
COL2A1-201ENST00000337299 HNRNPCL1O60812 293 aaKnown RBP14.01□□□□□ -0.17
COL2A1-201ENST00000337299 MYBP10242 640 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 MCL1Q07820 350 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 ZNF394Q53GI3 561 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 LACTB2Q53H82 288 aaPredicted RBP14.01□□□□□ -0.17
COL2A1-201ENST00000337299 DARS2Q6PI48 645 aaKnown RBP14.01□□□□□ -0.17
COL2A1-201ENST00000337299 APLFQ8IW19 511 aaPredicted RBP14.01□□□□□ -0.17
COL2A1-201ENST00000337299 WWP1Q9H0M0 922 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 MROH2AA6NES4 1674 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 PPIP5K2O43314 1243 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 KDM1AO60341 852 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 STAM2O75886 525 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 TMEM253P0C7T8 217 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 TNFRSF8P28908 595 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 AUHQ13825 339 aaKnown RBP14.01□□□□□ -0.17
COL2A1-201ENST00000337299 HADHQ16836 314 aaKnown RBP14.01□□□□□ -0.17
COL2A1-201ENST00000337299 BTNL9Q6UXG8 535 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 CCNJLQ8IV13 435 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 TTC25Q96NG3 672 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 APPL1Q9UKG1 709 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 F5H423 210 aaPredicted RBP14.01□□□□□ -0.17
COL2A1-201ENST00000337299 PJA2O43164 708 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 TCN1P20061 433 aaPredicted RBP14.01□□□□□ -0.17
COL2A1-201ENST00000337299 KRT81Q14533 505 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 FITM2Q8N6M3 262 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 SPIRE2Q8WWL2 714 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 ATXN2LQ8WWM7 1075 aaKnown RBP14.01□□□□□ -0.17
COL2A1-201ENST00000337299 MTA3Q9BTC8 594 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 MANSC1Q9H8J5 431 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 MINPP1Q9UNW1 487 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 EMSYQ7Z589 1322 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 CEMIPQ8WUJ3 1361 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 GPC4O75487 556 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 GH1P01241 217 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 CASP4P49662 377 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 CLEC4GQ6UXB4 293 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 APTXQ7Z2E3 356 aaKnown RBP14.01□□□□□ -0.17
COL2A1-201ENST00000337299 SYN2Q92777 582 aaPredicted RBP14.01□□□□□ -0.17
COL2A1-201ENST00000337299 ZNF570Q96NI8 536 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 FAM111AQ96PZ2 611 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 ZNF184Q99676 751 aaPredicted RBP14.01□□□□□ -0.17
COL2A1-201ENST00000337299 DHX36Q9H2U1 1008 aaKnown RBP14.01□□□□□ -0.17
COL2A1-201ENST00000337299 SIK3Q9Y2K2 1263 aa14.01□□□□□ -0.17
COL2A1-201ENST00000337299 PREX1Q8TCU6 1659 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 SRRM3A6NNA2 597 aaPredicted RBP14□□□□□ -0.17
COL2A1-201ENST00000337299 SMNDC1O75940 238 aaKnown RBP eCLIP14□□□□□ -0.17
COL2A1-201ENST00000337299 CLPTM1O96005 669 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 MYL2P10916 166 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 XKR9Q5GH70 373 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 WASHC2DQ5SRD0 308 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 RARS2Q5T160 578 aaKnown RBP14□□□□□ -0.17
COL2A1-201ENST00000337299 FRMD5Q7Z6J6 570 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 KLHL23Q8NBE8 558 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 SERPINI1Q99574 410 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 POP1Q99575 1024 aaKnown RBP14□□□□□ -0.17
COL2A1-201ENST00000337299 CCT7Q99832 543 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 CAAP1Q9H8G2 361 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 MYO3BQ8WXR4 1341 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 IPO5O00410 1097 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms