RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ATL2Q8NHH9 583 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 PDCD6IPQ8WUM4 868 aaKnown RBP10.33□□□□□ -0.76
COL4A6-201ENST00000334504 OSBP2Q969R2 916 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 FAM153AQ9UHL3 310 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.33□□□□□ -0.76
COL4A6-201ENST00000334504 RGS5O15539 181 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 RAD51CO43502 376 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 TRIM49P0CI25 452 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 TRIM49CP0CI26 452 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 DPP9Q86TI2 863 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 ZBTB38Q8NAP3 1195 aaPredicted RBP10.33□□□□□ -0.76
COL4A6-201ENST00000334504 PIGOQ8TEQ8 1089 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 OSBPL8Q9BZF1 889 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 KLHL11Q9NVR0 708 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 SLC5A4Q9NY91 659 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 MOSPD1Q9UJG1 213 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 CCDC78A2IDD5 438 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 DNALI1O14645 258 aaPredicted RBP10.32□□□□□ -0.76
COL4A6-201ENST00000334504 ATP9BO43861 1147 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 ANXA13P27216 316 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 PLA2G4AP47712 749 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 ARHGEF1Q92888 912 aaKnown RBP10.32□□□□□ -0.76
COL4A6-201ENST00000334504 MANSC1Q9H8J5 431 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 HAO1Q9UJM8 370 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 A2MP01023 1474 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 RNF103O00237 685 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 FOXN1O15353 648 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 CDH16O75309 829 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 KRT7P08729 469 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 TRADDQ15628 312 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 ADRM1Q16186 407 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 C17orf80Q9BSJ5 609 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 KDM4CQ9H3R0 1056 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 COPRSQ9NQ92 184 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 CYTH3O43739 400 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 ATP9AO75110 1047 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 ATP6V1G2O95670 118 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 TRIP4Q15650 581 aaPredicted RBP10.32□□□□□ -0.76
COL4A6-201ENST00000334504 ZNF667Q5HYK9 610 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 CEP95Q96GE4 821 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 CHP1Q99653 195 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 A0A1W2PQC6 194 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 E2F8A0AVK6 867 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 NUP107P57740 925 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 LAYNQ6UX15 382 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 KDM7AQ6ZMT4 941 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 RBM15Q96T37 977 aaKnown RBP eCLIP10.32□□□□□ -0.76
COL4A6-201ENST00000334504 KLHL31Q9H511 634 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 GREM2Q9H772 168 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 BFARQ9NZS9 450 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 PCDHGB4Q9UN71 923 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 CFAP65Q6ZU64 1925 aaKnown RBP10.32□□□□□ -0.76
COL4A6-201ENST00000334504 ARHGEF12Q9NZN5 1544 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 LOC100653049A0A140TA62 436 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 KRT34O76011 436 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 FKBP9O95302 570 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 ITIH4Q14624 930 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 FKBP9P1Q75LS8 142 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 C9orf72Q96LT7 481 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 QTRT2Q9H974 415 aaKnown RBP10.32□□□□□ -0.76
COL4A6-201ENST00000334504 AIPL1Q9NZN9 384 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 UBN2Q6ZU65 1347 aa10.32□□□□□ -0.76
COL4A6-201ENST00000334504 PRPF4O43172 522 aaKnown RBP eCLIP10.31□□□□□ -0.76
COL4A6-201ENST00000334504 CIAO1O76071 339 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 PSMC3P17980 439 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 BCAR1P56945 870 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 EIF3EP60228 445 aaKnown RBP10.31□□□□□ -0.76
COL4A6-201ENST00000334504 RASGRF1Q13972 1273 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 OASLQ15646 514 aaKnown RBP10.31□□□□□ -0.76
COL4A6-201ENST00000334504 COBLL1Q53SF7 1204 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 CDH24Q86UP0 819 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 P3H2Q8IVL5 708 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 LMCD1Q9NZU5 365 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 POTEMA6NI47 508 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 GNA15P30679 374 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 PTK7Q13308 1070 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 MAPRE1Q15691 268 aaKnown RBP10.31□□□□□ -0.76
COL4A6-201ENST00000334504 C6orf10Q5SRN2 563 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 SLFN12LQ6IEE8 588 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 RASGRP2Q7LDG7 609 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 TRIM69Q86WT6 500 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 OR8H2Q8N162 312 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 PCYOX1LQ8NBM8 494 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 KLF6Q99612 283 aaPredicted RBP10.31□□□□□ -0.76
COL4A6-201ENST00000334504 GINS4Q9BRT9 223 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 MXD3Q9BW11 206 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 HPS4Q9NQG7 708 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 NDFIP2Q9NV92 336 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 MPP6Q9NZW5 540 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 FAM32AQ9Y421 112 aaKnown RBP10.31□□□□□ -0.76
COL4A6-201ENST00000334504 M0QYV0 167 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 TOMM70O94826 608 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 ARIH2O95376 493 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 PSAPP07602 524 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 PYGMP11217 842 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 ITIH2P19823 946 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 SOX6P35712 828 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 OTUD4Q01804 1114 aaKnown RBP10.31□□□□□ -0.76
COL4A6-201ENST00000334504 RAD21L1Q9H4I0 556 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 GPR108Q9NPR9 543 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms