RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 TRPC6Q9Y210 931 aa20.41■□□□□ 0.86
LAMP1-201ENST00000332556 CCDC188H7C350 402 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 CYP11B1P15538 503 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 KCNA2P16389 499 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 POU5F1Q01860 360 aaKnown RBP20.4■□□□□ 0.86
LAMP1-201ENST00000332556 SNX1Q13596 522 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 SNCBQ16143 134 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 SELENOSQ9BQE4 189 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 ZNF214Q9UL59 606 aaPredicted RBP20.4■□□□□ 0.86
LAMP1-201ENST00000332556 TPX2Q9ULW0 747 aaKnown RBP20.4■□□□□ 0.86
LAMP1-201ENST00000332556 PTPRJQ12913 1337 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 SPOPO43791 374 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 DRD4P21917 467 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 KRT39Q6A163 491 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 TMEM130Q8N3G9 435 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 EIF1ADQ8N9N8 165 aaKnown RBP20.4■□□□□ 0.86
LAMP1-201ENST00000332556 ZNF280CQ8ND82 737 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 GIMAP7Q8NHV1 300 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 FMO2Q99518 471 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 POLR3FQ9H1D9 316 aaPredicted RBP20.4■□□□□ 0.86
LAMP1-201ENST00000332556 ACTR5Q9H9F9 607 aaPredicted RBP20.4■□□□□ 0.86
LAMP1-201ENST00000332556 COL11A1P12107 1806 aaPredicted RBP20.4■□□□□ 0.86
LAMP1-201ENST00000332556 ZNF541Q9H0D2 1346 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 SRRM3A6NNA2 597 aaPredicted RBP20.4■□□□□ 0.86
LAMP1-201ENST00000332556 O00370 1275 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 CCND2P30279 289 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 ACTR2P61160 394 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 TNFAIP1Q13829 316 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 FAM71AQ8IYT1 594 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 HVCN1Q96D96 273 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 DNAJC17Q9NVM6 304 aaKnown RBP20.4■□□□□ 0.86
LAMP1-201ENST00000332556 RAB20Q9NX57 234 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 ANKFY1Q9P2R3 1169 aa20.4■□□□□ 0.86
LAMP1-201ENST00000332556 STBD1O95210 358 aa20.39■□□□□ 0.85
LAMP1-201ENST00000332556 GJC1P36383 396 aa20.39■□□□□ 0.85
LAMP1-201ENST00000332556 NLRP11P59045 1033 aaKnown RBP20.39■□□□□ 0.85
LAMP1-201ENST00000332556 KRT76Q01546 638 aa20.39■□□□□ 0.85
LAMP1-201ENST00000332556 DRP2Q13474 957 aa20.39■□□□□ 0.85
LAMP1-201ENST00000332556 NIPA1Q7RTP0 329 aa20.39■□□□□ 0.85
LAMP1-201ENST00000332556 ZNF564Q8TBZ8 553 aaPredicted RBP20.39■□□□□ 0.85
LAMP1-201ENST00000332556 PICK1Q9NRD5 415 aa20.39■□□□□ 0.85
LAMP1-201ENST00000332556 TTLL13PA6NNM8 815 aa20.39■□□□□ 0.85
LAMP1-201ENST00000332556 EDN1P05305 212 aa20.39■□□□□ 0.85
LAMP1-201ENST00000332556 MAPTP10636 758 aaKnown RBP20.39■□□□□ 0.85
LAMP1-201ENST00000332556 JAK3P52333 1124 aa20.39■□□□□ 0.85
LAMP1-201ENST00000332556 MAP4K3Q8IVH8 894 aa20.39■□□□□ 0.85
LAMP1-201ENST00000332556 PRELID2Q8N945 189 aa20.39■□□□□ 0.85
LAMP1-201ENST00000332556 FBXO25Q8TCJ0 367 aa20.39■□□□□ 0.85
LAMP1-201ENST00000332556 ZBTB10Q96DT7 871 aa20.39■□□□□ 0.85
LAMP1-201ENST00000332556 HAPLN2Q9GZV7 340 aa20.39■□□□□ 0.85
LAMP1-201ENST00000332556 SLITRK6Q9H5Y7 841 aa20.39■□□□□ 0.85
LAMP1-201ENST00000332556 JPH1Q9HDC5 661 aaPredicted RBP20.39■□□□□ 0.85
LAMP1-201ENST00000332556 CHN1P15882 459 aa20.38■□□□□ 0.85
LAMP1-201ENST00000332556 TRIP13Q15645 432 aaPredicted RBP20.38■□□□□ 0.85
LAMP1-201ENST00000332556 PREPLQ4J6C6 727 aaPredicted RBP20.38■□□□□ 0.85
LAMP1-201ENST00000332556 C1orf54Q8WWF1 131 aa20.38■□□□□ 0.85
LAMP1-201ENST00000332556 XPO6Q96QU8 1125 aaKnown RBP20.38■□□□□ 0.85
LAMP1-201ENST00000332556 MTFR1LQ9H019 292 aa20.38■□□□□ 0.85
LAMP1-201ENST00000332556 C5orf60A6NFR6 353 aa20.38■□□□□ 0.85
LAMP1-201ENST00000332556 RTN2O75298 545 aa20.38■□□□□ 0.85
LAMP1-201ENST00000332556 TNNI1P19237 187 aa20.38■□□□□ 0.85
LAMP1-201ENST00000332556 CYP24A1Q07973 514 aa20.38■□□□□ 0.85
LAMP1-201ENST00000332556 JAMLQ86YT9 394 aa20.38■□□□□ 0.85
LAMP1-201ENST00000332556 SCYL3Q8IZE3 742 aa20.38■□□□□ 0.85
LAMP1-201ENST00000332556 FBXL13Q8NEE6 735 aa20.38■□□□□ 0.85
LAMP1-201ENST00000332556 ATG4AQ8WYN0 398 aa20.38■□□□□ 0.85
LAMP1-201ENST00000332556 SGSM3Q96HU1 749 aa20.38■□□□□ 0.85
LAMP1-201ENST00000332556 MCM8Q9UJA3 840 aa20.38■□□□□ 0.85
LAMP1-201ENST00000332556 DNAH12Q6ZR08 3092 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 LRRIQ4A6NIV6 560 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 LYPLA2O95372 231 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 ATP4AP20648 1035 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 MFAP3P55082 362 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 REPS2Q8NFH8 660 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 CCT6BQ92526 530 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 N4BP2L2Q92802 583 aaPredicted RBP20.37■□□□□ 0.85
LAMP1-201ENST00000332556 CHMP6Q96FZ7 201 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 ZSWIM1Q9BR11 485 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 CYP39A1Q9NYL5 469 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 SLC9A2Q9UBY0 812 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 DAAM1Q9Y4D1 1078 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 CLDN3O15551 220 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 ECM2O94769 699 aaPredicted RBP20.37■□□□□ 0.85
LAMP1-201ENST00000332556 PAEPP09466 180 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 ANXA13P27216 316 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 ZNF280AP59817 542 aaPredicted RBP20.37■□□□□ 0.85
LAMP1-201ENST00000332556 PTENP60484 403 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 IFI35P80217 286 aaPredicted RBP20.37■□□□□ 0.85
LAMP1-201ENST00000332556 NEDD9Q14511 834 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 CCDC25Q86WR0 208 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 SHC3Q92529 594 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 NT5C1BQ96P26 610 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 HERPUD2Q9BSE4 406 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 EPB41L4BQ9H329 900 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 CYP26B1Q9NR63 512 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 FAM114A2Q9NRY5 505 aa20.37■□□□□ 0.85
LAMP1-201ENST00000332556 UMODL1Q5DID0 1318 aa20.36■□□□□ 0.85
LAMP1-201ENST00000332556 SLCO1A2P46721 670 aa20.36■□□□□ 0.85
LAMP1-201ENST00000332556 PDE6CP51160 858 aa20.36■□□□□ 0.85
LAMP1-201ENST00000332556 PRUNE1Q86TP1 453 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms