RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 TEX33O43247 280 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 FAM189A1O60320 539 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 TADA3O75528 432 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 EOMESO95936 686 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 IQCF3P0C7M6 154 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 GNG11P61952 73 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 SNRNP35Q16560 246 aaKnown RBP10.3□□□□□ -0.76
C11orf54-201ENST00000331239 TRIM60Q495X7 471 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 PPFIBP1Q86W92 1011 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 BRSK2Q8IWQ3 736 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 RPUSD2Q8IZ73 545 aaKnown RBP10.3□□□□□ -0.76
C11orf54-201ENST00000331239 KRT222Q8N1A0 295 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 SEPT8Q92599 483 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 PGBD4Q96DM1 585 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 CNOT6LQ96LI5 555 aaKnown RBP10.3□□□□□ -0.76
C11orf54-201ENST00000331239 FAM81BQ96LP2 452 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 HIPK3Q9H422 1215 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 FAM124BQ9H5Z6 455 aaPredicted RBP10.3□□□□□ -0.76
C11orf54-201ENST00000331239 CPSF3Q9UKF6 684 aaKnown RBP10.3□□□□□ -0.76
C11orf54-201ENST00000331239 ST3GAL5Q9UNP4 418 aa10.3□□□□□ -0.76
C11orf54-201ENST00000331239 A0A1W2PQC6 194 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 TIMP1P01033 207 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 PBX1P40424 430 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 FAM189BP81408 668 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 CETN1Q12798 172 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 ZNF568Q3ZCX4 644 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 CCDC40Q4G0X9 1142 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 ARHGAP29Q52LW3 1261 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 PLEKHG4Q58EX7 1191 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 UBXN4Q92575 508 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 WNT8BQ93098 351 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 DESI2Q9BSY9 194 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 TCHPQ9BT92 498 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 CDT1Q9H211 546 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 CDHR5Q9HBB8 845 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 RGS18Q9NS28 235 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 TOPORSQ9NS56 1045 aaPredicted RBP10.29□□□□□ -0.76
C11orf54-201ENST00000331239 AKAP3O75969 853 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 CCDC175P0C221 793 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 CASQ1P31415 396 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 CYP24A1Q07973 514 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 BFSP1Q12934 665 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 XKR4Q5GH76 650 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 ZBTB10Q96DT7 871 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 CBWD1Q9BRT8 395 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 TUBGCP2Q9BSJ2 902 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 NAA15Q9BXJ9 866 aaKnown RBP10.29□□□□□ -0.76
C11orf54-201ENST00000331239 EDEM3Q9BZQ6 932 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 TMEM39AQ9NV64 488 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 PADI3Q9ULW8 664 aa10.29□□□□□ -0.76
C11orf54-201ENST00000331239 ITIH6Q6UXX5 1313 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 EFCAB8A8MWE9 144 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 PQBP1O60828 265 aaKnown RBP10.28□□□□□ -0.76
C11orf54-201ENST00000331239 MFAP3LO75121 409 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 MTIF2P46199 727 aaKnown RBP10.28□□□□□ -0.76
C11orf54-201ENST00000331239 GABPB1Q06547 395 aaPredicted RBP10.28□□□□□ -0.76
C11orf54-201ENST00000331239 KRT31Q15323 416 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 LRRC26Q2I0M4 334 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 VWA3BQ502W6 1294 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 DIS3LQ8TF46 1054 aaKnown RBP10.28□□□□□ -0.76
C11orf54-201ENST00000331239 TMEM40Q8WWA1 233 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 ACAP3Q96P50 834 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 WDR24Q96S15 920 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 CARD6Q9BX69 1037 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 TSPYL2Q9H2G4 693 aaPredicted RBP10.28□□□□□ -0.76
C11orf54-201ENST00000331239 RPF1Q9H9Y2 349 aaKnown RBP10.28□□□□□ -0.76
C11orf54-201ENST00000331239 GIT1Q9Y2X7 761 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 C2CD2Q9Y426 696 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.28□□□□□ -0.76
C11orf54-201ENST00000331239 A0A0U1RQF3 1178 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 SOWAHDA6NJG2 315 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 LGALS16A8MUM7 142 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 CLIC2O15247 247 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 HOXA2O43364 376 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 XPOTO43592 962 aaKnown RBP10.28□□□□□ -0.76
C11orf54-201ENST00000331239 CYP3A5P20815 502 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 CYP2J2P51589 502 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 VAMP7P51809 220 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 COPB1P53618 953 aaKnown RBP10.28□□□□□ -0.76
C11orf54-201ENST00000331239 YARSP54577 528 aaKnown RBP10.28□□□□□ -0.76
C11orf54-201ENST00000331239 FKBP15Q5T1M5 1219 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 CRELD2Q6UXH1 353 aaPredicted RBP10.28□□□□□ -0.76
C11orf54-201ENST00000331239 WDR49Q8IV35 697 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 CNGA4Q8IV77 575 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 FMNL3Q8IVF7 1028 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 TMEM199Q8N511 208 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 ERGIC2Q96RQ1 377 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 ARGLU1Q9NWB6 273 aaPredicted RBP10.28□□□□□ -0.76
C11orf54-201ENST00000331239 ZNF446Q9NWS9 450 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 PRDM4Q9UKN5 801 aa10.28□□□□□ -0.76
C11orf54-201ENST00000331239 PIN4Q9Y237 131 aaKnown RBP10.28□□□□□ -0.76
C11orf54-201ENST00000331239 CITO14578 2027 aa10.27□□□□□ -0.76
C11orf54-201ENST00000331239 KIAA0100Q14667 2235 aaKnown RBP10.27□□□□□ -0.77
C11orf54-201ENST00000331239 ZC3H11AO75152 810 aaKnown RBP eCLIP10.27□□□□□ -0.77
C11orf54-201ENST00000331239 BAIAP3O94812 1187 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 AFPP02771 609 aaKnown RBP10.27□□□□□ -0.77
C11orf54-201ENST00000331239 TPM1P09493 284 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 KCNE1P15382 129 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 RFX1P22670 979 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 MATR3P43243 847 aaKnown RBP eCLIP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms