RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 HPS3Q969F9 1004 aa17.92■□□□□ 0.46
PDLIM1-201ENST00000329399 CCDC51Q96ER9 411 aa17.92■□□□□ 0.46
PDLIM1-201ENST00000329399 TUBGCP2Q9BSJ2 902 aa17.92■□□□□ 0.46
PDLIM1-201ENST00000329399 NUP58Q9BVL2 599 aa17.92■□□□□ 0.46
PDLIM1-201ENST00000329399 TRAIPQ9BWF2 469 aa17.92■□□□□ 0.46
PDLIM1-201ENST00000329399 RNF39Q9H2S5 420 aa17.92■□□□□ 0.46
PDLIM1-201ENST00000329399 TMEM206Q9H813 350 aa17.92■□□□□ 0.46
PDLIM1-201ENST00000329399 FAM105AQ9NUU6 356 aa17.92■□□□□ 0.46
PDLIM1-201ENST00000329399 FNDC1Q4ZHG4 1894 aaPredicted RBP17.92■□□□□ 0.46
PDLIM1-201ENST00000329399 MTIF2P46199 727 aaKnown RBP17.91■□□□□ 0.46
PDLIM1-201ENST00000329399 SMTNP53814 917 aa17.91■□□□□ 0.46
PDLIM1-201ENST00000329399 TFDP1Q14186 410 aa17.91■□□□□ 0.46
PDLIM1-201ENST00000329399 FKBP15Q5T1M5 1219 aa17.91■□□□□ 0.46
PDLIM1-201ENST00000329399 PPFIBP1Q86W92 1011 aa17.91■□□□□ 0.46
PDLIM1-201ENST00000329399 SMG8Q8ND04 991 aaKnown RBP17.91■□□□□ 0.46
PDLIM1-201ENST00000329399 HELQQ8TDG4 1101 aa17.91■□□□□ 0.46
PDLIM1-201ENST00000329399 KCNN1Q92952 543 aa17.91■□□□□ 0.46
PDLIM1-201ENST00000329399 CNOT6LQ96LI5 555 aaKnown RBP17.91■□□□□ 0.46
PDLIM1-201ENST00000329399 NFKBIZQ9BYH8 718 aa17.91■□□□□ 0.46
PDLIM1-201ENST00000329399 FZD8Q9H461 694 aa17.91■□□□□ 0.46
PDLIM1-201ENST00000329399 CWH43Q9H720 699 aa17.91■□□□□ 0.46
PDLIM1-201ENST00000329399 INTS13Q9NVM9 706 aa17.91■□□□□ 0.46
PDLIM1-201ENST00000329399 HES2Q9Y543 173 aa17.91■□□□□ 0.46
PDLIM1-201ENST00000329399 PCDHB2Q9Y5E7 798 aa17.91■□□□□ 0.46
PDLIM1-201ENST00000329399 GRM6O15303 877 aa17.9■□□□□ 0.46
PDLIM1-201ENST00000329399 GCNT3O95395 438 aa17.9■□□□□ 0.46
PDLIM1-201ENST00000329399 POU3F3P20264 500 aaPredicted RBP17.9■□□□□ 0.46
PDLIM1-201ENST00000329399 DNAJB1P25685 340 aa17.9■□□□□ 0.46
PDLIM1-201ENST00000329399 CTNNB1P35222 781 aa17.9■□□□□ 0.46
PDLIM1-201ENST00000329399 HSP90AA2PQ14568 343 aaPredicted RBP17.9■□□□□ 0.46
PDLIM1-201ENST00000329399 MAN2A1Q16706 1144 aa17.9■□□□□ 0.46
PDLIM1-201ENST00000329399 AGMOQ6ZNB7 445 aa17.9■□□□□ 0.46
PDLIM1-201ENST00000329399 HS2ST1Q7LGA3 356 aa17.9■□□□□ 0.46
PDLIM1-201ENST00000329399 MICALL1Q8N3F8 863 aa17.9■□□□□ 0.46
PDLIM1-201ENST00000329399 CCDC113Q9H0I3 377 aa17.9■□□□□ 0.46
PDLIM1-201ENST00000329399 METTL14Q9HCE5 456 aaKnown RBP17.9■□□□□ 0.46
PDLIM1-201ENST00000329399 MUC3AQ02505 3323 aa17.9■□□□□ 0.46
PDLIM1-201ENST00000329399 H3BNC9 293 aa17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 SLC16A3O15427 465 aaKnown RBP17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 B4GALT3O60512 393 aa17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 ZNF623O75123 536 aa17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 EOMESO95936 686 aa17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 PBX3P40426 434 aa17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 NPTX2P47972 431 aa17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 PEX3P56589 373 aa17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 GPM6BQ13491 265 aa17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 CAMK1Q14012 370 aa17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 HSP90AA4PQ58FG1 418 aa17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 TAS1R3Q7RTX0 852 aa17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 FRMD5Q7Z6J6 570 aa17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 MRPL10Q7Z7H8 261 aaKnown RBP17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 SPIRE2Q8WWL2 714 aa17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 NTPCRQ9BSD7 190 aaKnown RBP17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 STRA6Q9BX79 667 aa17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 NAA15Q9BXJ9 866 aaKnown RBP17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 ALG13Q9NP73 1137 aaKnown RBP17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 TBC1D7Q9P0N9 293 aa17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 C5orf42Q9H799 3197 aa17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 MYH11P35749 1972 aa17.89■□□□□ 0.45
PDLIM1-201ENST00000329399 C5orf67F2Z3F1 127 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 ERLIN2O94905 339 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 NAMPTP43490 491 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 UBXN1Q04323 297 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 ADAM9Q13443 819 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 FAM43BQ6ZT52 329 aaPredicted RBP17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 CNGA4Q8IV77 575 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 CACTINQ8WUQ7 758 aaKnown RBP17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 PANX2Q96RD6 677 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 ERGIC2Q96RQ1 377 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 FIZ1Q96SL8 496 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 MKNK1Q9BUB5 465 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 TMEM117Q9H0C3 514 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 VPS16Q9H269 839 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 CXCL16Q9H2A7 254 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 EXOC7Q9UPT5 735 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 COL4A4P53420 1690 aaPredicted RBP17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 A0A1B0GUA9 196 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 OFD1O75665 1012 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 PPP1R37O75864 691 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 CSPG5O95196 566 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 ITGB1P05556 798 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 CLCN1P35523 988 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 FIGNQ5HY92 759 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 EEF1DP3Q658K8 133 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 SLC9A9Q8IVB4 645 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 KLHL23Q8NBE8 558 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 KIAA1524Q8TCG1 905 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 ACCSQ96QU6 501 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 GBP3Q9H0R5 595 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 KCND1Q9NSA2 647 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 TAB2Q9NYJ8 693 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 PLAGL2Q9UPG8 496 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 IPPQ9Y573 584 aa17.88■□□□□ 0.45
PDLIM1-201ENST00000329399 NLRC5Q86WI3 1866 aa17.87■□□□□ 0.45
PDLIM1-201ENST00000329399 TTC28Q96AY4 2481 aa17.87■□□□□ 0.45
PDLIM1-201ENST00000329399 KIAA1671Q9BY89 1806 aa17.87■□□□□ 0.45
PDLIM1-201ENST00000329399 CCDC169A6NNP5 214 aa17.87■□□□□ 0.45
PDLIM1-201ENST00000329399 AKR1B15C9JRZ8 316 aaPredicted RBP17.87■□□□□ 0.45
PDLIM1-201ENST00000329399 CCP110O43303 1012 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms