RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 CCDC144BQ3MJ40 725 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 CEP120Q8N960 986 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 NT5C1AQ9BXI3 368 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.1□□□□□ -0.47
COL4A5-201ENST00000328300 CAPN7Q9Y6W3 813 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 CASQ2O14958 399 aaPredicted RBP12.1□□□□□ -0.47
COL4A5-201ENST00000328300 VIL1P09327 827 aaKnown RBP12.1□□□□□ -0.47
COL4A5-201ENST00000328300 CPB1P15086 417 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 WDR72Q3MJ13 1102 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 PPP6R3Q5H9R7 873 aaPredicted RBP12.1□□□□□ -0.47
COL4A5-201ENST00000328300 BCAS4Q8TDM0 211 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 FRMD8Q9BZ67 464 aaPredicted RBP12.1□□□□□ -0.47
COL4A5-201ENST00000328300 PXMP2Q9NR77 195 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 CYP3A4P08684 503 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 PMLP29590 882 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 GRB10Q13322 594 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 NXNQ6DKJ4 435 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 CYP4F22Q6NT55 531 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 GLYCTKQ8IVS8 523 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 RBBP8NLQ8NC74 664 aaPredicted RBP12.1□□□□□ -0.47
COL4A5-201ENST00000328300 IFT43Q96FT9 208 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 SENP2Q9HC62 589 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 AAASQ9NRG9 546 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 KBTBD4Q9NVX7 518 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 BFARQ9NZS9 450 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 LMCD1Q9NZU5 365 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 COL14A1Q05707 1796 aaKnown RBP12.09□□□□□ -0.47
COL4A5-201ENST00000328300 C1orf228Q6PIY5 440 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 METTL7BQ6UX53 244 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 CLEC10AQ8IUN9 316 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 SOCS4Q8WXH5 440 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 GLT1D1Q96MS3 346 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 FSD1LQ9BXM9 530 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 SENP1Q9P0U3 644 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 LSM7Q9UK45 103 aaKnown RBP12.09□□□□□ -0.47
COL4A5-201ENST00000328300 MTSS1O43312 755 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 TM4SF1P30408 202 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 MTA1Q13330 715 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 ZNF394Q53GI3 561 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 EFHC1Q5JVL4 640 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 HOMEZQ8IX15 550 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 IL17RAQ96F46 866 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 UBN1Q9NPG3 1134 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 OGTO15294 1046 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 DDR1Q08345 913 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 PPP2R5CQ13362 524 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 NTRK3Q16288 839 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 ANO4Q32M45 955 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 RBM43Q6ZSC3 357 aaKnown RBP12.09□□□□□ -0.47
COL4A5-201ENST00000328300 GBP7Q8N8V2 638 aaPredicted RBP12.09□□□□□ -0.47
COL4A5-201ENST00000328300 ARRDC4Q8NCT1 418 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 OLFML3Q9NRN5 406 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 HGSO14964 777 aaPredicted RBP12.09□□□□□ -0.47
COL4A5-201ENST00000328300 CASP8Q14790 479 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 MYCBPQ99417 103 aaPredicted RBP12.09□□□□□ -0.47
COL4A5-201ENST00000328300 AP1M1Q9BXS5 423 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 ZNF518BQ9C0D4 1074 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 TXLNGQ9NUQ3 528 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 GTPBP10A4D1E9 387 aaKnown RBP12.09□□□□□ -0.47
COL4A5-201ENST00000328300 MYBP10242 640 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 ADORA2BP29275 332 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 ATICP31939 592 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 INHBEP58166 350 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 CAPN12Q6ZSI9 719 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 ATP11CQ8NB49 1132 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 ATL2Q8NHH9 583 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 VCX3AQ9NNX9 186 aa12.09□□□□□ -0.47
COL4A5-201ENST00000328300 TAF6P49848 677 aa12.08□□□□□ -0.47
COL4A5-201ENST00000328300 EP400NLQ6ZTU2 488 aa12.08□□□□□ -0.47
COL4A5-201ENST00000328300 PLEKHA4Q9H4M7 779 aa12.08□□□□□ -0.47
COL4A5-201ENST00000328300 FGFR1OP2Q9NVK5 253 aa12.08□□□□□ -0.47
COL4A5-201ENST00000328300 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.08□□□□□ -0.47
COL4A5-201ENST00000328300 DDTLA6NHG4 134 aaPredicted RBP12.08□□□□□ -0.48
COL4A5-201ENST00000328300 PPP1R3GB7ZBB8 358 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 HLA-DRAP01903 254 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 CYBBP04839 570 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 CYP2B6P20813 491 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 CXCR5P32302 372 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 SLC8A1P32418 973 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 RAB27AP51159 221 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 FKBP1BP68106 108 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 BFSP2Q13515 415 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 ACER1Q8TDN7 264 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 ASAP3Q8TDY4 903 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 PDCD2LQ9BRP1 358 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 AGO4Q9HCK5 861 aaKnown RBP12.08□□□□□ -0.48
COL4A5-201ENST00000328300 DSEQ9UL01 958 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 H7C4K7 107 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 P3H1Q32P28 736 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 DEFB132Q7Z7B7 95 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 STKLD1Q8NE28 680 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 PLEKHA5Q9HAU0 1116 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 SAYSD1Q9NPB0 183 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 BAG5Q9UL15 447 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 SIGLEC1Q9BZZ2 1709 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 NPHP3-ACAD11A0A0J9YXS1 232 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 SPIRE2Q8WWL2 714 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 ATP6V1E2Q96A05 226 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 IL25Q9H293 177 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 TAF1DQ9H5J8 278 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms