RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 SCARA5Q6ZMJ2 495 aa20.21■□□□□ 0.83
SPSB1-201ENST00000328089 SEC16BQ96JE7 1060 aa20.21■□□□□ 0.83
SPSB1-201ENST00000328089 WRNIP1Q96S55 665 aa20.21■□□□□ 0.83
SPSB1-201ENST00000328089 PXMP2Q9NR77 195 aa20.21■□□□□ 0.83
SPSB1-201ENST00000328089 GRHL1Q9NZI5 618 aa20.21■□□□□ 0.83
SPSB1-201ENST00000328089 KRT10P13645 584 aa20.21■□□□□ 0.83
SPSB1-201ENST00000328089 RWDD2BP57060 319 aa20.21■□□□□ 0.83
SPSB1-201ENST00000328089 NLRP11P59045 1033 aaKnown RBP20.21■□□□□ 0.83
SPSB1-201ENST00000328089 B3GNT9Q6UX72 402 aa20.21■□□□□ 0.83
SPSB1-201ENST00000328089 CD302Q8IX05 232 aa20.21■□□□□ 0.83
SPSB1-201ENST00000328089 FAM71AQ8IYT1 594 aa20.21■□□□□ 0.83
SPSB1-201ENST00000328089 SCLT1Q96NL6 688 aa20.21■□□□□ 0.83
SPSB1-201ENST00000328089 PABPC3Q9H361 631 aaKnown RBP20.21■□□□□ 0.83
SPSB1-201ENST00000328089 ZNRF3Q9ULT6 936 aa20.21■□□□□ 0.83
SPSB1-201ENST00000328089 COILP38432 576 aaPredicted RBP20.2■□□□□ 0.82
SPSB1-201ENST00000328089 ORC1Q13415 861 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 HELQQ8TDG4 1101 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 POLR3FQ9H1D9 316 aaPredicted RBP20.2■□□□□ 0.82
SPSB1-201ENST00000328089 CD248Q9HCU0 757 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 INTS9Q9NV88 658 aaKnown RBP20.2■□□□□ 0.82
SPSB1-201ENST00000328089 PCDHA10Q9Y5I2 948 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 UBIAD1Q9Y5Z9 338 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 PFASO15067 1338 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 RPTORQ8N122 1335 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 SYNGAP1Q96PV0 1343 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 ECEL1O95672 775 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 BRD2P25440 801 aaKnown RBP20.2■□□□□ 0.82
SPSB1-201ENST00000328089 PIK3CAP42336 1068 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 GTF2BQ00403 316 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 CEP57Q86XR8 500 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 CACNA2D3Q8IZS8 1091 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 TARS2Q9BW92 718 aaKnown RBP20.2■□□□□ 0.82
SPSB1-201ENST00000328089 EPB41L4BQ9H329 900 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 SLC38A10Q9HBR0 1119 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 C1orf112Q9NSG2 853 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 UMODL1Q5DID0 1318 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 CES2O00748 559 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 RASGRF2O14827 1237 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 PEX5P50542 639 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 POLGP54098 1239 aaPredicted RBP20.2■□□□□ 0.82
SPSB1-201ENST00000328089 PCNX4Q63HM2 1172 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 GMLQ99445 158 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 DEFB129Q9H1M3 183 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 TBC1D22BQ9NU19 505 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 PCDHB4Q9Y5E5 795 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 SIPA1L1O43166 1804 aa20.2■□□□□ 0.82
SPSB1-201ENST00000328089 ZNF831Q5JPB2 1677 aa20.19■□□□□ 0.82
SPSB1-201ENST00000328089 SLC26A4O43511 780 aa20.19■□□□□ 0.82
SPSB1-201ENST00000328089 PLCB3Q01970 1234 aa20.19■□□□□ 0.82
SPSB1-201ENST00000328089 PRKCEQ02156 737 aa20.19■□□□□ 0.82
SPSB1-201ENST00000328089 STRA6Q9BX79 667 aa20.19■□□□□ 0.82
SPSB1-201ENST00000328089 HAUS2Q9NVX0 235 aa20.19■□□□□ 0.82
SPSB1-201ENST00000328089 KCND2Q9NZV8 630 aa20.19■□□□□ 0.82
SPSB1-201ENST00000328089 GOLGA8SH3BPF8 625 aa20.19■□□□□ 0.82
SPSB1-201ENST00000328089 GOLGA8MH3BSY2 632 aa20.19■□□□□ 0.82
SPSB1-201ENST00000328089 TRAPPC3O43617 180 aa20.19■□□□□ 0.82
SPSB1-201ENST00000328089 CSDE1O75534 798 aaKnown RBP20.19■□□□□ 0.82
SPSB1-201ENST00000328089 IFNB1P01574 187 aa20.19■□□□□ 0.82
SPSB1-201ENST00000328089 RALAP11233 206 aa20.19■□□□□ 0.82
SPSB1-201ENST00000328089 LRIG3Q6UXM1 1119 aa20.19■□□□□ 0.82
SPSB1-201ENST00000328089 MICALCLQ6ZW33 695 aa20.19■□□□□ 0.82
SPSB1-201ENST00000328089 NPM3O75607 178 aaKnown RBP20.18■□□□□ 0.82
SPSB1-201ENST00000328089 TCF4P15884 667 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 PTGIRP43119 386 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 NSFP46459 744 aaKnown RBP20.18■□□□□ 0.82
SPSB1-201ENST00000328089 DYNLT1P63172 113 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 GKAP1Q5VSY0 366 aaPredicted RBP20.18■□□□□ 0.82
SPSB1-201ENST00000328089 WDR78Q5VTH9 848 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 MMS22LQ6ZRQ5 1243 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 CCDC13Q8IYE1 715 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 LRRC34Q8IZ02 419 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 ZNF516Q92618 1163 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 PTPRJQ12913 1337 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 DNM1LO00429 736 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 ZSCAN5DPP0CG00 497 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 CHRNA3P32297 505 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 FKBP1AP62942 108 aaKnown RBP20.18■□□□□ 0.82
SPSB1-201ENST00000328089 CDR2Q01850 454 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 CNTN2Q02246 1040 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 TMEM132AQ24JP5 1023 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 CIAPIN1Q6FI81 312 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 SLC9A9Q8IVB4 645 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 OSBPL7Q9BZF2 842 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 HOOK3Q86VS8 718 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 SHC3Q92529 594 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 KIFAP3Q92845 792 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 JPH2Q9BR39 696 aaPredicted RBP20.18■□□□□ 0.82
SPSB1-201ENST00000328089 MOV10L1Q9BXT6 1211 aaKnown RBP20.18■□□□□ 0.82
SPSB1-201ENST00000328089 EXOC7Q9UPT5 735 aa20.18■□□□□ 0.82
SPSB1-201ENST00000328089 VWA5AO00534 786 aa20.17■□□□□ 0.82
SPSB1-201ENST00000328089 PPFIA2O75334 1257 aa20.17■□□□□ 0.82
SPSB1-201ENST00000328089 WDR44Q5JSH3 913 aa20.17■□□□□ 0.82
SPSB1-201ENST00000328089 KCNV1Q6PIU1 500 aa20.17■□□□□ 0.82
SPSB1-201ENST00000328089 MICALL2Q8IY33 904 aa20.17■□□□□ 0.82
SPSB1-201ENST00000328089 GPATCH11Q8N954 259 aa20.17■□□□□ 0.82
SPSB1-201ENST00000328089 XPO6Q96QU8 1125 aaKnown RBP20.17■□□□□ 0.82
SPSB1-201ENST00000328089 TTLL13PA6NNM8 815 aa20.17■□□□□ 0.82
SPSB1-201ENST00000328089 SRGAP2CP0DJJ0 459 aa20.17■□□□□ 0.82
SPSB1-201ENST00000328089 CYP24A1Q07973 514 aa20.17■□□□□ 0.82
SPSB1-201ENST00000328089 E2F5Q15329 346 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms