RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 TRABD2AQ86V40 505 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 MAPKAPK5Q8IW41 473 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 SYT2Q8N9I0 419 aaPredicted RBP13.63□□□□□ -0.23
CCDC60-201ENST00000327554 DTNBP1Q96EV8 351 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 ZFP69BQ9UJL9 534 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 ZNFX1Q9P2E3 1918 aaKnown RBP13.62□□□□□ -0.23
CCDC60-201ENST00000327554 TNRC6CQ9HCJ0 1690 aaKnown RBP13.62□□□□□ -0.23
CCDC60-201ENST00000327554 MEIS1O00470 390 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 FSCN2O14926 492 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 CLDN3O15551 220 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 ATMINO43313 823 aaPredicted RBP13.62□□□□□ -0.23
CCDC60-201ENST00000327554 TBX10O75333 385 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 GCNT3O95395 438 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 PYGBP11216 843 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 GSTT1P30711 240 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 PSMC2P35998 433 aaKnown RBP13.62□□□□□ -0.23
CCDC60-201ENST00000327554 PSMC4P43686 418 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 SERPINB4P48594 390 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 SLC34A1Q06495 639 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 SPARCL1Q14515 664 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 STAT4Q14765 748 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 LLGL1Q15334 1064 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 SF3B3Q15393 1217 aaKnown RBP13.62□□□□□ -0.23
CCDC60-201ENST00000327554 LRRC23Q53EV4 343 aaPredicted RBP13.62□□□□□ -0.23
CCDC60-201ENST00000327554 PHLDB3Q6NSJ2 640 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 PPP1R18Q6NYC8 613 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 CLNKQ7Z7G1 428 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 KBTBD2Q8IY47 623 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 PSPC1Q8WXF1 523 aaKnown RBP13.62□□□□□ -0.23
CCDC60-201ENST00000327554 BTBD6Q96KE9 485 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 METTL5Q9NRN9 209 aaKnown RBP13.62□□□□□ -0.23
CCDC60-201ENST00000327554 MYH14Q7Z406 1995 aaKnown RBP13.62□□□□□ -0.23
CCDC60-201ENST00000327554 C2CD2LO14523 706 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 CAPN9O14815 690 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 PRPF4O43172 522 aaKnown RBP eCLIP13.62□□□□□ -0.23
CCDC60-201ENST00000327554 SORBS3O60504 671 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 FGFR1P11362 822 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 GCAP28676 217 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 SPIRE1Q08AE8 756 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 TRIP13Q15645 432 aaPredicted RBP13.62□□□□□ -0.23
CCDC60-201ENST00000327554 SGO2Q562F6 1265 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 NLRP9Q7RTR0 991 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 NCSTNQ92542 709 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 OCEL1Q9H607 264 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 CHST7Q9NS84 486 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 PDP2Q9P2J9 529 aa13.62□□□□□ -0.23
CCDC60-201ENST00000327554 A0A1W2PRG0 241 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 HNRNPCL1O60812 293 aaKnown RBP13.61□□□□□ -0.23
CCDC60-201ENST00000327554 PSMG1O95456 288 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 CYP1A1P04798 512 aaPredicted RBP13.61□□□□□ -0.23
CCDC60-201ENST00000327554 TRIM49P0CI25 452 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 TRIM49CP0CI26 452 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 SPATA31C1P0DKV0 1188 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 CAV1Q03135 178 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 AP1B1Q10567 949 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 KPNB1Q14974 876 aaKnown RBP13.61□□□□□ -0.23
CCDC60-201ENST00000327554 CERKLQ49MI3 558 aaPredicted RBP13.61□□□□□ -0.23
CCDC60-201ENST00000327554 ERFEQ4G0M1 354 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 PABPC1LQ4VXU2 614 aaKnown RBP13.61□□□□□ -0.23
CCDC60-201ENST00000327554 ZNF746Q6NUN9 644 aaPredicted RBP13.61□□□□□ -0.23
CCDC60-201ENST00000327554 OTOAQ7RTW8 1153 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 SDCCAG8Q86SQ7 713 aaPredicted RBP13.61□□□□□ -0.23
CCDC60-201ENST00000327554 TXNRD3Q86VQ6 643 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 MARCH10Q8NA82 808 aaPredicted RBP13.61□□□□□ -0.23
CCDC60-201ENST00000327554 C9orf72Q96LT7 481 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 TRAIPQ9BWF2 469 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 KRT82Q9NSB4 513 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 KANSL3Q9P2N6 904 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 ANAPC5Q9UJX4 755 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 ATF5Q9Y2D1 282 aaPredicted RBP13.61□□□□□ -0.23
CCDC60-201ENST00000327554 ABCA3Q99758 1704 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 SPOPO43791 374 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 TOM1O60784 492 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 POLD1P28340 1107 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 SLC18A1P54219 525 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 PLEKHG4Q58EX7 1191 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 MTDHQ86UE4 582 aaKnown RBP13.61□□□□□ -0.23
CCDC60-201ENST00000327554 RIBC1Q8N443 379 aaPredicted RBP13.61□□□□□ -0.23
CCDC60-201ENST00000327554 ATG4AQ8WYN0 398 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 GBP5Q96PP8 586 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 PCDHB18PQ96TA0 734 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 JMJD4Q9H9V9 463 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 ZNF287Q9HBT7 754 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 UBN1Q9NPG3 1134 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 CCDC87Q9NVE4 849 aa13.61□□□□□ -0.23
CCDC60-201ENST00000327554 SBF2Q86WG5 1849 aa13.6□□□□□ -0.23
CCDC60-201ENST00000327554 PNMA6FA0A0J9YX94 578 aa13.6□□□□□ -0.23
CCDC60-201ENST00000327554 GSC2O15499 205 aa13.6□□□□□ -0.23
CCDC60-201ENST00000327554 PPP4CP60510 307 aa13.6□□□□□ -0.23
CCDC60-201ENST00000327554 GRIK5Q16478 980 aa13.6□□□□□ -0.23
CCDC60-201ENST00000327554 NFIL3Q16649 462 aa13.6□□□□□ -0.23
CCDC60-201ENST00000327554 CNPY1Q3B7I2 92 aa13.6□□□□□ -0.23
CCDC60-201ENST00000327554 SYDE1Q6ZW31 735 aaPredicted RBP13.6□□□□□ -0.23
CCDC60-201ENST00000327554 RELL1Q8IUW5 271 aa13.6□□□□□ -0.23
CCDC60-201ENST00000327554 LMO3Q8TAP4 145 aa13.6□□□□□ -0.23
CCDC60-201ENST00000327554 PTCD3Q96EY7 689 aaKnown RBP13.6□□□□□ -0.23
CCDC60-201ENST00000327554 NDNQ99608 321 aa13.6□□□□□ -0.23
CCDC60-201ENST00000327554 LBHD1Q9BQE6 289 aaPredicted RBP13.6□□□□□ -0.23
CCDC60-201ENST00000327554 CCDC77Q9BR77 488 aa13.6□□□□□ -0.23
CCDC60-201ENST00000327554 BTBD10Q9BSF8 475 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms