RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 FSBPO95073 299 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 ZBED1O96006 694 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 SHMT1P34896 483 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 SLC12A3P55017 1021 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 TMPRSS15P98073 1019 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 TFDP2Q14188 446 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 KIF2BQ8N4N8 673 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 HSPH1Q92598 858 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 CFAP36Q96G28 342 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 TRAPPC3O43617 180 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 MUTP22033 750 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 ARFIP2P53365 341 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 RAD23BP54727 409 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 VPS72Q15906 364 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 HIF1AQ16665 826 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 EPC2Q52LR7 807 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 THNSL1Q8IYQ7 743 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 FAF2Q96CS3 445 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 FAM167BQ9BTA0 163 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 POLR3FQ9H1D9 316 aaPredicted RBP15.64■□□□□ 0.09
TCOF1-201ENST00000323668 GANQ9H2C0 597 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 KCNH7Q9NS40 1196 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 PPARGC1AQ9UBK2 798 aaKnown RBP15.64■□□□□ 0.09
TCOF1-201ENST00000323668 C21orf2O43822 256 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 CNGA1P29973 690 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 SERPINB6P35237 376 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 MAGEA4P43358 317 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 ZNF667Q5HYK9 610 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 NCAPG2Q86XI2 1143 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 RCOR2Q8IZ40 523 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 SLC20A1Q8WUM9 679 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 CBWD1Q9BRT8 395 aa15.64■□□□□ 0.09
TCOF1-201ENST00000323668 ZWINTO95229 277 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 CCND1P24385 295 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 SSTR3P32745 418 aaPredicted RBP15.63■□□□□ 0.09
TCOF1-201ENST00000323668 CYP2W1Q8TAV3 490 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 BTBD6Q96KE9 485 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 DDX56Q9NY93 547 aaKnown RBP15.63■□□□□ 0.09
TCOF1-201ENST00000323668 SLC9A2Q9UBY0 812 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 ITGB3BPQ13352 177 aaPredicted RBP15.63■□□□□ 0.09
TCOF1-201ENST00000323668 AP1ARQ63HQ0 302 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 ACAD10Q6JQN1 1059 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 ERP27Q96DN0 273 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 UNC45AQ9H3U1 944 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 BATF3Q9NR55 127 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 PCSK1NQ9UHG2 260 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 IGF2BP3O00425 579 aaKnown RBP eCLIP15.63■□□□□ 0.09
TCOF1-201ENST00000323668 CASP5P51878 434 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 YTHDF3Q7Z739 585 aaKnown RBP15.63■□□□□ 0.09
TCOF1-201ENST00000323668 C4orf33Q8N1A6 199 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 FAM118BQ9BPY3 351 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 ADAM33Q9BZ11 813 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 CNOT7Q9UIV1 285 aaKnown RBP15.63■□□□□ 0.09
TCOF1-201ENST00000323668 CFAP69A5D8W1 941 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 KIF1CO43896 1103 aaKnown RBP15.63■□□□□ 0.09
TCOF1-201ENST00000323668 TOM1L1O75674 476 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 DGAT1O75907 488 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 POLD1P28340 1107 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 GARSP41250 739 aaKnown RBP15.63■□□□□ 0.09
TCOF1-201ENST00000323668 MYBPC2Q14324 1141 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 COG2Q14746 738 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 C11orf63Q6NUN7 778 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 GMCL1Q96IK5 515 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 KLHL11Q9NVR0 708 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 ANGPTL2Q9UKU9 493 aa15.63■□□□□ 0.09
TCOF1-201ENST00000323668 KIF1AQ12756 1690 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 AFDNP55196 1824 aaKnown RBP15.62■□□□□ 0.09
TCOF1-201ENST00000323668 FAM86B1E9PN63 330 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 FAM86B2P0C5J1 330 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 COPS2P61201 443 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 CENPCQ03188 943 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 RBBP5Q15291 538 aaKnown RBP15.62■□□□□ 0.09
TCOF1-201ENST00000323668 CRLF3Q8IUI8 442 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 AGGF1Q8N302 714 aaeCLIP15.62■□□□□ 0.098e-7■□□□□ 10.4
TCOF1-201ENST00000323668 NGRNQ9NPE2 291 aaKnown RBP15.62■□□□□ 0.09
TCOF1-201ENST00000323668 SRRM3A6NNA2 597 aaPredicted RBP15.62■□□□□ 0.09
TCOF1-201ENST00000323668 BTNL10A8MVZ5 291 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 FANCGO15287 622 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 GSTA1P08263 222 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 RALAP11233 206 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 RHBDL3P58872 404 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 ANKRD20A8PQ5CZ79 823 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 AFAP1L2Q8N4X5 818 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 RAB3IL1Q8TBN0 382 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 SPDL1Q96EA4 605 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 HEXIM2Q96MH2 286 aaKnown RBP15.62■□□□□ 0.09
TCOF1-201ENST00000323668 CDC42EP4Q9H3Q1 356 aaKnown RBP15.62■□□□□ 0.09
TCOF1-201ENST00000323668 KRT38O76015 456 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 LCA5LO95447 670 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 ARL1P40616 181 aaPredicted RBP15.62■□□□□ 0.09
TCOF1-201ENST00000323668 IGBP1P78318 339 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 ZNF699Q32M78 642 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 EXOC8Q8IYI6 725 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 NME8Q8N427 588 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 SENP7Q9BQF6 1050 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 SEPT10Q9P0V9 454 aa15.62■□□□□ 0.09
TCOF1-201ENST00000323668 ACOT2P49753 483 aa15.61■□□□□ 0.09
TCOF1-201ENST00000323668 HGSNATQ68CP4 663 aa15.61■□□□□ 0.09
TCOF1-201ENST00000323668 PLA2G4FQ68DD2 849 aa15.61■□□□□ 0.09
TCOF1-201ENST00000323668 CAPRIN2Q6IMN6 1127 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms