RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 TMEM131LA2VDJ0 1609 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 FAM170AA1A519 330 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 ZNF233A6NK53 670 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 NOP56O00567 594 aaKnown RBP7.45□□□□□ -1.22
SMC1A-201ENST00000322213 HNRNPRO43390 633 aaKnown RBP7.45□□□□□ -1.22
SMC1A-201ENST00000322213 PYGLP06737 847 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 CAPN1P07384 714 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 HMOX2P30519 316 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 MAPK7Q13164 816 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 NT5DC1Q5TFE4 455 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 CD302Q8IX05 232 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 MAB21L3Q8N8X9 362 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 JADE3Q92613 823 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 ABCB11O95342 1321 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 PFDN6O15212 129 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 NR3C1P04150 777 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 EXOSC10Q01780 885 aaKnown RBP7.44□□□□□ -1.22
SMC1A-201ENST00000322213 GSTA3Q16772 222 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 P3H1Q32P28 736 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.44□□□□□ -1.22
SMC1A-201ENST00000322213 TTC16Q8NEE8 873 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 EMILIN3Q9NT22 766 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 CARD8Q9Y2G2 431 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 CDY2AQ9Y6F7 541 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 CDY1Q9Y6F8 540 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 COL3A1P02461 1466 aaPredicted RBP7.44□□□□□ -1.22
SMC1A-201ENST00000322213 MED7O43513 233 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 FKBP6O75344 327 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 ATP5BP06576 529 aaKnown RBP7.44□□□□□ -1.22
SMC1A-201ENST00000322213 BTNL9Q6UXG8 535 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 LRRC34Q8IZ02 419 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 SLC35G2Q8TBE7 412 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 SDR42E1Q8WUS8 393 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 TLK1Q9UKI8 766 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 ASNA1O43681 348 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 H2AFYO75367 372 aaKnown RBP7.44□□□□□ -1.22
SMC1A-201ENST00000322213 TTLL1O95922 423 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 SLC34A1Q06495 639 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 SPOPLQ6IQ16 392 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 ANKRD23Q86SG2 305 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 NEDD4P46934 1319 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 DLEC1Q9Y238 1755 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 GOLGA8SH3BPF8 625 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 GOLGA8MH3BSY2 632 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 OCM2P0CE71 109 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 OCMP0CE72 109 aaPredicted RBP7.44□□□□□ -1.22
SMC1A-201ENST00000322213 CDC27P30260 824 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 USH1GQ495M9 461 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 PLEKHA7Q6IQ23 1121 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 GUF1Q8N442 669 aaKnown RBP7.44□□□□□ -1.22
SMC1A-201ENST00000322213 ATL2Q8NHH9 583 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 WDR60Q8WVS4 1066 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 TSPAN18Q96SJ8 248 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 RBM15Q96T37 977 aaKnown RBP eCLIP7.44□□□□□ -1.222e-7■■□□□ 13.3
SMC1A-201ENST00000322213 EPS8L2Q9H6S3 715 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 GINM1Q9NU53 330 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 TTLL3Q9Y4R7 772 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 MIS18BP1Q6P0N0 1132 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 SETD3Q86TU7 594 aaPredicted RBP7.44□□□□□ -1.22
SMC1A-201ENST00000322213 RDH13Q8NBN7 331 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 ERGIC2Q96RQ1 377 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 ZSWIM5Q9P217 1185 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 SMCHD1A6NHR9 2005 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 PLA2G4BP0C869 781 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 TAC1P20366 129 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 DYNLT1P63172 113 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 DAB2P98082 770 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 RIPK1Q13546 671 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 NLRP9Q7RTR0 991 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 SGMS1Q86VZ5 419 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 CNBD1Q8NA66 436 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 CTNNAL1Q9UBT7 734 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 AFG3L2Q9Y4W6 797 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 CPS1P31327 1500 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 DOCK5Q9H7D0 1870 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 DLGAP3O95886 979 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 KRT16P08779 473 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 ADORA1P30542 326 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 FNTAP49354 379 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 COASYQ13057 564 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 ZFP1Q6P2D0 407 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 SH3GL1Q99961 368 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 TRIM51Q9BSJ1 452 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 LMTK2Q8IWU2 1503 aa7.44□□□□□ -1.22
SMC1A-201ENST00000322213 CYTH3O43739 400 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 JAK1P23458 1154 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 CASP1P29466 404 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 LPCAT2Q7L5N7 544 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 ZBTB38Q8NAP3 1195 aaPredicted RBP7.43□□□□□ -1.22
SMC1A-201ENST00000322213 GPR101Q96P66 508 aaPredicted RBP7.43□□□□□ -1.22
SMC1A-201ENST00000322213 SETDB2Q96T68 719 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 SAR1AQ9NR31 198 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 HERC5Q9UII4 1024 aaKnown RBP7.43□□□□□ -1.22
SMC1A-201ENST00000322213 RTTNQ86VV8 2226 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 KIF26BQ2KJY2 2108 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 SPAG6O75602 509 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 ARSEP51690 589 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 ERVK-24P63145 666 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 GABPAQ06546 454 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 SLC5A9Q2M3M2 681 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms