RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 CATSPER2Q96P56 530 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 POLR3CQ9BUI4 534 aaPredicted RBP8.46□□□□□ -1.05
RTL3-201ENST00000321110 SPZ1Q9BXG8 430 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 PCDH18Q9HCL0 1135 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 BARHL2Q9NY43 387 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 DCTN4Q9UJW0 460 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 WDR37Q9Y2I8 494 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 PCDHA2Q9Y5H9 948 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 PAPPAQ13219 1627 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 DLEC1Q9Y238 1755 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 TNS3Q68CZ2 1445 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 A0A1W2PRG0 241 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 USP17L12C9JPN9 530 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 USP17L21D6R901 530 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 USP1O94782 785 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 ZWINTO95229 277 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 PYGMP11217 842 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 ADARP55265 1226 aaKnown RBP8.46□□□□□ -1.06
RTL3-201ENST00000321110 PHEXP78562 749 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 CACNB1Q02641 598 aaPredicted RBP8.46□□□□□ -1.06
RTL3-201ENST00000321110 SPARCL1Q14515 664 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 NONOQ15233 471 aaKnown RBP eCLIP8.46□□□□□ -1.06
RTL3-201ENST00000321110 SLC1A5Q15758 541 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 PHLDB3Q6NSJ2 640 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 KLC3Q6P597 504 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 ACAD11Q709F0 780 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 NEK8Q86SG6 692 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 PHLDB2Q86SQ0 1253 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 SCUBE1Q8IWY4 988 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 PPP2R3CQ969Q6 453 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 ZNF653Q96CK0 615 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 HAUS1Q96CS2 278 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 MTMR9Q96QG7 549 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 ZSWIM1Q9BR11 485 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 SYT11Q9BT88 431 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 PTTG2Q9NZH5 202 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 SH3GLB1Q9Y371 365 aa8.46□□□□□ -1.06
RTL3-201ENST00000321110 KCPQ6ZWJ8 1503 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 MYH3P11055 1940 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 VILLO15195 856 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 HAUS5O94927 633 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 CDK4P11802 303 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 SLC5A1P13866 664 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 NR2F2P24468 414 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 RPA3P35244 121 aaPredicted RBP8.45□□□□□ -1.06
RTL3-201ENST00000321110 TMED1Q13445 227 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 LLGL1Q15334 1064 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 TMEM119Q4V9L6 283 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 TMEM259Q4ZIN3 620 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 SH3D19Q5HYK7 790 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 NCCRP1Q6ZVX7 275 aaPredicted RBP8.45□□□□□ -1.06
RTL3-201ENST00000321110 TRABD2AQ86V40 505 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 CPNE8Q86YQ8 564 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 WDR66Q8TBY9 1149 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 CABLES1Q8TDN4 633 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 SNX29Q8TEQ0 813 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 NSL1Q96IY1 281 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 EMILIN3Q9NT22 766 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 ARHGEF38Q9NXL2 777 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 WHRNQ9P202 907 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 ANGPTL2Q9UKU9 493 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 PAIP2BQ9ULR5 123 aaKnown RBP8.45□□□□□ -1.06
RTL3-201ENST00000321110 BARX2Q9UMQ3 279 aaPredicted RBP8.45□□□□□ -1.06
RTL3-201ENST00000321110 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.45□□□□□ -1.06
RTL3-201ENST00000321110 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.45□□□□□ -1.06
RTL3-201ENST00000321110 CASZ1Q86V15 1759 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 ATAD5Q96QE3 1844 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 ZMYM2Q9UBW7 1377 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 SMIM31A0A1B0GVY4 71 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 SPDYE16A6NNV3 312 aaPredicted RBP8.45□□□□□ -1.06
RTL3-201ENST00000321110 TMEM110-MUSTN1A8MSY1 372 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 BUD23O43709 281 aaKnown RBP8.45□□□□□ -1.06
RTL3-201ENST00000321110 TOM1O60784 492 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 PIM1P11309 404 aaPredicted RBP8.45□□□□□ -1.06
RTL3-201ENST00000321110 IVDP26440 423 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 VPS41P49754 854 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 ITGA8P53708 1063 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 KRT17Q04695 432 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 OVGP1Q12889 678 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 HNRNPDQ14103 355 aaKnown RBP8.45□□□□□ -1.06
RTL3-201ENST00000321110 GRM2Q14416 872 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 DCAF17Q5H9S7 520 aaPredicted RBP8.45□□□□□ -1.06
RTL3-201ENST00000321110 RAPH1Q70E73 1250 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 KRT25Q7Z3Z0 450 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 SLC13A5Q86YT5 568 aaPredicted RBP8.45□□□□□ -1.06
RTL3-201ENST00000321110 TBCKQ8TEA7 893 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 GAB3Q8WWW8 586 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 ARHGEF1Q92888 912 aaKnown RBP8.45□□□□□ -1.06
RTL3-201ENST00000321110 PPP1R14BQ96C90 147 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 OXCT2Q9BYC2 517 aaPredicted RBP8.45□□□□□ -1.06
RTL3-201ENST00000321110 RANBP17Q9H2T7 1088 aaKnown RBP8.45□□□□□ -1.06
RTL3-201ENST00000321110 FBXO6Q9NRD1 293 aaPredicted RBP8.45□□□□□ -1.06
RTL3-201ENST00000321110 DDX18Q9NVP1 670 aaKnown RBP8.45□□□□□ -1.06
RTL3-201ENST00000321110 MAD2L2Q9UI95 211 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 PPM1HQ9ULR3 514 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 PCDH11YQ9BZA8 1340 aa8.45□□□□□ -1.06
RTL3-201ENST00000321110 A8MXQ7 604 aa8.44□□□□□ -1.06
RTL3-201ENST00000321110 BOLA2-SMG1P6H3BVE0 249 aa8.44□□□□□ -1.06
RTL3-201ENST00000321110 PRPF4O43172 522 aaKnown RBP eCLIP8.44□□□□□ -1.06
RTL3-201ENST00000321110 SLC37A4O43826 429 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms