RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 BEND6Q5SZJ8 279 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-201ENST00000321105 VSIG1Q86XK7 387 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 CPB2Q96IY4 423 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 TAF1DQ9H5J8 278 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-201ENST00000321105 OLFML3Q9NRN5 406 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 CAPN7Q9Y6W3 813 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 IGSF9BQ9UPX0 1349 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 A6NJR5 290 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 CCDC188H7C350 402 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 ZNF263O14978 683 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 TGFB1I1O43294 461 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 ATP8B1O43520 1251 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 PRPSAP2O60256 369 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 LLGL2Q6P1M3 1020 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 RSRC2Q7L4I2 434 aaKnown RBP11.72□□□□□ -0.53
TOP3A-201ENST00000321105 TAOK1Q7L7X3 1001 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 AFG1LQ8WV93 481 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 FAM167AQ96KS9 214 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 LRRC4Q9HBW1 653 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 SAYSD1Q9NPB0 183 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 CPA4Q9UI42 421 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 GGT7Q9UJ14 662 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 ASTN1O14525 1302 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 H3BQF6 201 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 RTN2O75298 545 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 KRT10P13645 584 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 RAP1GAPP47736 663 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 MRPS9P82933 396 aaKnown RBP11.72□□□□□ -0.53
TOP3A-201ENST00000321105 MYO1EQ12965 1108 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 SPOUT1Q5T280 376 aaKnown RBP11.72□□□□□ -0.53
TOP3A-201ENST00000321105 FASTKD5Q7L8L6 764 aaKnown RBP11.72□□□□□ -0.53
TOP3A-201ENST00000321105 SRRM1Q8IYB3 904 aaKnown RBP11.72□□□□□ -0.53
TOP3A-201ENST00000321105 C1orf131Q8NDD1 294 aaKnown RBP11.72□□□□□ -0.53
TOP3A-201ENST00000321105 OR6J1Q8NGC5 347 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 ARHGEF26Q96DR7 871 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 RASSF4Q9H2L5 321 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 TRAF3IP3Q9Y228 551 aa11.72□□□□□ -0.53
TOP3A-201ENST00000321105 SUPT20HL2P0C7V6 817 aa11.71□□□□□ -0.53
TOP3A-201ENST00000321105 EPHX2P34913 555 aa11.71□□□□□ -0.53
TOP3A-201ENST00000321105 CDH8P55286 799 aa11.71□□□□□ -0.53
TOP3A-201ENST00000321105 CCDC6Q16204 474 aa11.71□□□□□ -0.53
TOP3A-201ENST00000321105 PAN2Q504Q3 1202 aaKnown RBP11.71□□□□□ -0.53
TOP3A-201ENST00000321105 TREML2Q5T2D2 321 aa11.71□□□□□ -0.53
TOP3A-201ENST00000321105 GPAT2Q6NUI2 795 aa11.71□□□□□ -0.53
TOP3A-201ENST00000321105 FAM47EQ6ZV65 393 aa11.71□□□□□ -0.53
TOP3A-201ENST00000321105 GPRASP2Q96D09 838 aa11.71□□□□□ -0.53
TOP3A-201ENST00000321105 ASCC2Q9H1I8 757 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-201ENST00000321105 KIAA1586Q9HCI6 787 aa11.71□□□□□ -0.53
TOP3A-201ENST00000321105 TMEM8AQ9HCN3 771 aa11.71□□□□□ -0.53
TOP3A-201ENST00000321105 ANKEF1Q9NU02 776 aa11.71□□□□□ -0.53
TOP3A-201ENST00000321105 PARP4Q9UKK3 1724 aaKnown RBP11.71□□□□□ -0.53
TOP3A-201ENST00000321105 A8MXQ7 604 aa11.71□□□□□ -0.53
TOP3A-201ENST00000321105 ZNF157P51786 506 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-201ENST00000321105 ATF7IP2Q5U623 682 aa11.71□□□□□ -0.53
TOP3A-201ENST00000321105 PHLDB3Q6NSJ2 640 aa11.71□□□□□ -0.53
TOP3A-201ENST00000321105 USP38Q8NB14 1042 aa11.71□□□□□ -0.53
TOP3A-201ENST00000321105 WHAMMQ8TF30 809 aa11.71□□□□□ -0.53
TOP3A-201ENST00000321105 MAIP1Q8WWC4 291 aa11.71□□□□□ -0.53
TOP3A-201ENST00000321105 C18orf8Q96DM3 657 aa11.71□□□□□ -0.53
TOP3A-201ENST00000321105 CDCA5Q96FF9 252 aa11.71□□□□□ -0.53
TOP3A-201ENST00000321105 MKNK1Q9BUB5 465 aa11.71□□□□□ -0.53
TOP3A-201ENST00000321105 TNPO2O14787 897 aaKnown RBP11.71□□□□□ -0.54
TOP3A-201ENST00000321105 ITGB3P05106 788 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 CYP11B1P15538 503 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 MYL6P60660 151 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 GPS1Q13098 491 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 SNAPC2Q13487 334 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 PPP2R5EQ16537 467 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 C1orf228Q6PIY5 440 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 VSIG10LQ86VR7 867 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 EMC1Q8N766 993 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 GRK7Q8WTQ7 553 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 GINM1Q9NU53 330 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 GPRC5DQ9NZD1 345 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 WRAP73Q9P2S5 460 aaPredicted RBP11.71□□□□□ -0.54
TOP3A-201ENST00000321105 VAV3Q9UKW4 847 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 SYNGAP1Q96PV0 1343 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 ZNF541Q9H0D2 1346 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 A0A087WZ62 844 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 EXOC1LA0A1B0GW35 172 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 CCNE2O96020 404 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 ZNF131P52739 623 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 SEC24CP53992 1094 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 RNASELQ05823 741 aaKnown RBP11.71□□□□□ -0.54
TOP3A-201ENST00000321105 TRADDQ15628 312 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 FIGNQ5HY92 759 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 ERO1BQ86YB8 467 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 BAP1Q92560 729 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 EXOC4Q96A65 974 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 FDXACB1Q9BRP7 624 aaPredicted RBP11.71□□□□□ -0.54
TOP3A-201ENST00000321105 KCND2Q9NZV8 630 aa11.71□□□□□ -0.54
TOP3A-201ENST00000321105 TAF1P21675 1872 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 LRRC37A3O60309 1634 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 IGKV6D-41A0A0C4DH26 115 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 CCDC78A2IDD5 438 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 MIF4GDA9UHW6 222 aaKnown RBP11.7□□□□□ -0.54
TOP3A-201ENST00000321105 SLC4A1P02730 911 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 LCP1P13796 627 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 CACNB2Q08289 660 aaPredicted RBP11.7□□□□□ -0.54
TOP3A-201ENST00000321105 ITKQ08881 620 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms