RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 PARP2Q9UGN5 583 aa13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 SLC4A7Q9Y6M7 1214 aa13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 TTC3P53804 2025 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 MICAL3Q7RTP6 2002 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 LACTBL1A8MY62 500 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 PTGESO14684 152 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 HOXA2O43364 376 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 DGKIO75912 1065 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 FGFR1OPO95684 399 aaKnown RBP13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 FGFR1P11362 822 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 KCNE1P15382 129 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 MLH1P40692 756 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 AFF1P51825 1210 aaKnown RBP13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 YARSP54577 528 aaKnown RBP13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 MARSP56192 900 aaKnown RBP13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 CYP24A1Q07973 514 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 PSMD6Q15008 389 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 CEP135Q66GS9 1140 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 TMCO2Q7Z6W1 182 aaPredicted RBP13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 CD302Q8IX05 232 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 FAM186BQ8IYM0 893 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 RDH13Q8NBN7 331 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 PLEKHO2Q8TD55 490 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 NOC3LQ8WTT2 800 aaKnown RBP13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 RSPH1Q8WYR4 309 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 ZNF689Q96CS4 500 aaPredicted RBP13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 RNPC3Q96LT9 517 aaKnown RBP13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 CASD1Q96PB1 797 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 GAD1Q99259 594 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 ANP32EQ9BTT0 268 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 TMEM117Q9H0C3 514 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 HSD3B7Q9H2F3 369 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 THAP9Q9H5L6 903 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 ASB7Q9H672 318 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 CBX8Q9HC52 389 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 KLK14Q9P0G3 267 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 CNTN3Q9P232 1028 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 LRFN2Q9ULH4 789 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 FRMD4BQ9Y2L6 1034 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 NFE2L3Q9Y4A8 694 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 A0A0C4DFX4 3053 aa13.75□□□□□ -0.21
CHMP2A-201ENST00000312547 ARL5CA6NH57 179 aa13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 IL18RAPO95256 599 aa13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 GJB5O95377 273 aa13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 GNA14O95837 355 aa13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 EPB41P11171 864 aaKnown RBP13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 ZNF18P17022 549 aa13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 IBSPP21815 317 aaPredicted RBP13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 GATMP50440 423 aa13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 CLDN10P78369 228 aa13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 HTRA4P83105 476 aaPredicted RBP13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 ZBTB6Q15916 424 aa13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 CDKAL1Q5VV42 579 aa13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 GLB1LQ6UWU2 654 aa13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 CHRDL2Q6WN34 429 aa13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 INTS8Q75QN2 995 aaKnown RBP13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 HERC6Q8IVU3 1022 aa13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 AOPEPQ8N6M6 819 aa13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 FAM200AQ8TCP9 573 aa13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 HELQQ8TDG4 1101 aa13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 TMC2Q8TDI7 906 aa13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 PARD3BQ8TEW8 1205 aa13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 ZFP42Q96MM3 310 aa13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 ZMAT2Q96NC0 199 aaKnown RBP13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 TSPAN18Q96SJ8 248 aa13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 SAMSN1Q9NSI8 373 aaKnown RBP13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 COL4A6Q14031 1691 aa13.74□□□□□ -0.21
CHMP2A-201ENST00000312547 SMIM28A0A1B0GU29 152 aa13.73□□□□□ -0.21
CHMP2A-201ENST00000312547 UPP2O95045 317 aa13.73□□□□□ -0.21
CHMP2A-201ENST00000312547 ATP2A2P16615 1042 aaKnown RBP13.73□□□□□ -0.21
CHMP2A-201ENST00000312547 PPP2R3AQ06190 1150 aa13.73□□□□□ -0.21
CHMP2A-201ENST00000312547 SURF1Q15526 300 aa13.73□□□□□ -0.21
CHMP2A-201ENST00000312547 NAB2Q15742 525 aa13.73□□□□□ -0.21
CHMP2A-201ENST00000312547 NOMO2Q5JPE7 1267 aa13.73□□□□□ -0.21
CHMP2A-201ENST00000312547 C1orf220Q5T0J3 134 aa13.73□□□□□ -0.21
CHMP2A-201ENST00000312547 FRMD5Q7Z6J6 570 aa13.73□□□□□ -0.21
CHMP2A-201ENST00000312547 EFCAB13Q8IY85 973 aa13.73□□□□□ -0.21
CHMP2A-201ENST00000312547 PPP1R10Q96QC0 940 aaKnown RBP13.73□□□□□ -0.21
CHMP2A-201ENST00000312547 METTL14Q9HCE5 456 aaKnown RBP13.73□□□□□ -0.21
CHMP2A-201ENST00000312547 PDE11AQ9HCR9 933 aa13.73□□□□□ -0.21
CHMP2A-201ENST00000312547 FANCLQ9NW38 375 aa13.73□□□□□ -0.21
CHMP2A-201ENST00000312547 MIOSQ9NXC5 875 aa13.73□□□□□ -0.21
CHMP2A-201ENST00000312547 ARMCX3Q9UH62 379 aaPredicted RBP13.73□□□□□ -0.21
CHMP2A-201ENST00000312547 PLAGL2Q9UPG8 496 aa13.73□□□□□ -0.21
CHMP2A-201ENST00000312547 DERAQ9Y315 318 aa13.73□□□□□ -0.21
CHMP2A-201ENST00000312547 C2CD2Q9Y426 696 aa13.73□□□□□ -0.21
CHMP2A-201ENST00000312547 CUL9Q8IWT3 2517 aa13.73□□□□□ -0.21
CHMP2A-201ENST00000312547 PTPRJQ12913 1337 aa13.72□□□□□ -0.21
CHMP2A-201ENST00000312547 SMTNL1A8MU46 457 aa13.72□□□□□ -0.21
CHMP2A-201ENST00000312547 NFICP08651 508 aa13.72□□□□□ -0.21
CHMP2A-201ENST00000312547 SCNN1GP51170 649 aa13.72□□□□□ -0.21
CHMP2A-201ENST00000312547 VAMP7P51809 220 aa13.72□□□□□ -0.21
CHMP2A-201ENST00000312547 BFSP1Q12934 665 aa13.72□□□□□ -0.21
CHMP2A-201ENST00000312547 TPD52L1Q16890 204 aaPredicted RBP13.72□□□□□ -0.21
CHMP2A-201ENST00000312547 FAM109BQ6ICB4 259 aaPredicted RBP13.72□□□□□ -0.21
CHMP2A-201ENST00000312547 LUZP1Q86V48 1076 aa13.72□□□□□ -0.21
CHMP2A-201ENST00000312547 GAS2L3Q86XJ1 694 aa13.72□□□□□ -0.21
CHMP2A-201ENST00000312547 NT5DC4Q86YG4 428 aa13.72□□□□□ -0.21
CHMP2A-201ENST00000312547 TRIM59Q8IWR1 403 aa13.72□□□□□ -0.21
CHMP2A-201ENST00000312547 CCDC127Q96BQ5 260 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms