RNA–Protein interactions for RNA: ENST00000311388.7

DEPDC7-202, Transcript of DEP domain containing 7, humanhuman

TSL 1 (best) BASIC

Gene DEPDC7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-202ENST00000311388 BRSK2Q8IWQ3 736 aa17.21■□□□□ 0.35
DEPDC7-202ENST00000311388 OR6J1Q8NGC5 347 aa17.21■□□□□ 0.35
DEPDC7-202ENST00000311388 TPCN2Q8NHX9 752 aa17.21■□□□□ 0.35
DEPDC7-202ENST00000311388 PCDHB18PQ96TA0 734 aa17.21■□□□□ 0.35
DEPDC7-202ENST00000311388 TCHPQ9BT92 498 aa17.21■□□□□ 0.35
DEPDC7-202ENST00000311388 SEPT11Q9NVA2 429 aaKnown RBP17.21■□□□□ 0.35
DEPDC7-202ENST00000311388 FLRT1Q9NZU1 646 aa17.21■□□□□ 0.35
DEPDC7-202ENST00000311388 H3BRB1 525 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 TMEM253P0C7T8 217 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 TCP1P17987 556 aaKnown RBP17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 NOP2P46087 812 aaKnown RBP17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 GCNT1Q02742 428 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 CKAP4Q07065 602 aaKnown RBP17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 MAP2K5Q13163 448 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 HSP90AA2PQ14568 343 aaPredicted RBP17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 TAF1CQ15572 869 aaPredicted RBP17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 MSANTD4Q8NCY6 345 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 ARID3AQ99856 593 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 PDCL3Q9H2J4 239 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 GOLPH3Q9H4A6 298 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 TUT1Q9H6E5 874 aaKnown RBP17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 IFT122Q9HBG6 1241 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 ZCCHC17Q9NP64 241 aaKnown RBP17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 PACSIN2Q9UNF0 486 aaPredicted RBP17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 NCANO14594 1321 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 COL1A2P08123 1366 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 INO80B-WBP1J3KQ70 363 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 OGTO15294 1046 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 MAGEB2O15479 319 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 PIK3CAP42336 1068 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 TUBB4BP68371 445 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 BIRC3Q13489 604 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 TAF3Q5VWG9 929 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 EEF1DP3Q658K8 133 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 SPOPLQ6IQ16 392 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 RGMBQ6NW40 437 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 MSL3Q8N5Y2 521 aaKnown RBP17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 ARHGEF26Q96DR7 871 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 PNKPQ96T60 521 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 NFKBIZQ9BYH8 718 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 INO80BQ9C086 356 aaPredicted RBP17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 TSKSQ9UJT2 592 aa17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 CPSF3Q9UKF6 684 aaKnown RBP17.2■□□□□ 0.34
DEPDC7-202ENST00000311388 RRP9O43818 475 aaKnown RBP17.19■□□□□ 0.34
DEPDC7-202ENST00000311388 RHOXF2BP0C7M4 288 aa17.19■□□□□ 0.34
DEPDC7-202ENST00000311388 ABCB4P21439 1286 aa17.19■□□□□ 0.34
DEPDC7-202ENST00000311388 MARCH8Q5T0T0 291 aa17.19■□□□□ 0.34
DEPDC7-202ENST00000311388 ATF7IP2Q5U623 682 aa17.19■□□□□ 0.34
DEPDC7-202ENST00000311388 MTHFD1LQ6UB35 978 aa17.19■□□□□ 0.34
DEPDC7-202ENST00000311388 MPZL3Q6UWV2 235 aa17.19■□□□□ 0.34
DEPDC7-202ENST00000311388 C17orf99Q6UX52 265 aa17.19■□□□□ 0.34
DEPDC7-202ENST00000311388 ZNF572Q7Z3I7 529 aaPredicted RBP17.19■□□□□ 0.34
DEPDC7-202ENST00000311388 CDR2LQ86X02 465 aaPredicted RBP17.19■□□□□ 0.34
DEPDC7-202ENST00000311388 USP6NLQ92738 828 aa17.19■□□□□ 0.34
DEPDC7-202ENST00000311388 RHOXF2Q9BQY4 288 aa17.19■□□□□ 0.34
DEPDC7-202ENST00000311388 THAP2Q9H0W7 228 aa17.19■□□□□ 0.34
DEPDC7-202ENST00000311388 ISCUQ9H1K1 167 aa17.19■□□□□ 0.34
DEPDC7-202ENST00000311388 APOBEC3GQ9HC16 384 aaKnown RBP17.19■□□□□ 0.34
DEPDC7-202ENST00000311388 C1orf112Q9NSG2 853 aa17.19■□□□□ 0.34
DEPDC7-202ENST00000311388 SLC5A4Q9NY91 659 aa17.19■□□□□ 0.34
DEPDC7-202ENST00000311388 SMARCAL1Q9NZC9 954 aa17.19■□□□□ 0.34
DEPDC7-202ENST00000311388 EHD2Q9NZN4 543 aa17.19■□□□□ 0.34
DEPDC7-202ENST00000311388 A0A087WZ62 844 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 CALCAP01258 141 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 MMEP08473 750 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 CYP11B1P15538 503 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 FMO1Q01740 532 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 TNFAIP2Q03169 654 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 POU5F1BQ06416 359 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 ENOSF1Q7L5Y1 443 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 SLFN11Q7Z7L1 901 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 IFNL1Q8IU54 200 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 SLC35G2Q8TBE7 412 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 CAGE1Q8TC20 777 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 DDX1Q92499 740 aaKnown RBP17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 PPP1R16BQ96T49 567 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 FDXACB1Q9BRP7 624 aaPredicted RBP17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 OSGEPQ9NPF4 335 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 ANKRD62A6NC57 917 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 CSDE1O75534 798 aaKnown RBP17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 FTLP02792 175 aaPredicted RBP17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 SLC10A3P09131 477 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 HOXC6P09630 235 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 GRM1Q13255 1194 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 IFI16Q16666 785 aaKnown RBP17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 AMHR2Q16671 573 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 WDR44Q5JSH3 913 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 IFNLR1Q8IU57 520 aaPredicted RBP17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 RFFLQ8WZ73 363 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 RPGRIP1Q96KN7 1286 aa17.18■□□□□ 0.34
DEPDC7-202ENST00000311388 VTNP04004 478 aa17.17■□□□□ 0.34
DEPDC7-202ENST00000311388 GRIK4Q16099 956 aa17.17■□□□□ 0.34
DEPDC7-202ENST00000311388 CCL14Q16627 93 aa17.17■□□□□ 0.34
DEPDC7-202ENST00000311388 DGKDQ16760 1214 aa17.17■□□□□ 0.34
DEPDC7-202ENST00000311388 WDR49Q8IV35 697 aa17.17■□□□□ 0.34
DEPDC7-202ENST00000311388 CEP120Q8N960 986 aa17.17■□□□□ 0.34
DEPDC7-202ENST00000311388 CTNNBL1Q8WYA6 563 aaPredicted RBP17.17■□□□□ 0.34
DEPDC7-202ENST00000311388 MS4A14Q96JA4 679 aa17.17■□□□□ 0.34
DEPDC7-202ENST00000311388 RAB21Q9UL25 225 aa17.17■□□□□ 0.34
DEPDC7-202ENST00000311388 GNEQ9Y223 722 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms