RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 CCDC70Q6NSX1 233 aa9.24□□□□□ -0.93
LCLAT1-201ENST00000309052 DCUN1D2Q6PH85 259 aa9.24□□□□□ -0.93
LCLAT1-201ENST00000309052 TAS1R3Q7RTX0 852 aa9.24□□□□□ -0.93
LCLAT1-201ENST00000309052 CCDC170Q8IYT3 715 aa9.24□□□□□ -0.93
LCLAT1-201ENST00000309052 GOLGA1Q92805 767 aa9.24□□□□□ -0.93
LCLAT1-201ENST00000309052 ERO1AQ96HE7 468 aa9.24□□□□□ -0.93
LCLAT1-201ENST00000309052 CAPNS2Q96L46 248 aa9.24□□□□□ -0.93
LCLAT1-201ENST00000309052 POLIQ9UNA4 740 aa9.24□□□□□ -0.93
LCLAT1-201ENST00000309052 TIMM13Q9Y5L4 95 aaPredicted RBP9.24□□□□□ -0.93
LCLAT1-201ENST00000309052 MXD4Q14582 209 aaPredicted RBP9.24□□□□□ -0.93
LCLAT1-201ENST00000309052 CD99L2Q8TCZ2 262 aa9.24□□□□□ -0.93
LCLAT1-201ENST00000309052 LMBR1Q8WVP7 490 aa9.24□□□□□ -0.93
LCLAT1-201ENST00000309052 DDX3XO00571 662 aaKnown RBP eCLIP9.24□□□□□ -0.938e-8■■□□□ 12.8
LCLAT1-201ENST00000309052 TOM1L1O75674 476 aa9.24□□□□□ -0.93
LCLAT1-201ENST00000309052 BRD2P25440 801 aaKnown RBP9.24□□□□□ -0.93
LCLAT1-201ENST00000309052 PLCB3Q01970 1234 aa9.24□□□□□ -0.93
LCLAT1-201ENST00000309052 FBXO38Q6PIJ6 1188 aa9.24□□□□□ -0.93
LCLAT1-201ENST00000309052 CPNE8Q86YQ8 564 aa9.24□□□□□ -0.93
LCLAT1-201ENST00000309052 RDM1Q8NG50 284 aa9.24□□□□□ -0.93
LCLAT1-201ENST00000309052 HEMGNQ9BXL5 484 aa9.24□□□□□ -0.93
LCLAT1-201ENST00000309052 PTPRJQ12913 1337 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 M0QZ92 97 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 ZEB2O60315 1214 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 RGS7P49802 495 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 GPC3P51654 580 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 MTM1Q13496 603 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 CDO1Q16878 200 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 DNAJC21Q5F1R6 531 aaKnown RBP9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 KCNV1Q6PIU1 500 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 TRIM58Q8NG06 486 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 UHMK1Q8TAS1 419 aaKnown RBP9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 GANQ9H2C0 597 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 CITO14578 2027 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 MYADML2A6NDP7 307 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 GPR25O00155 361 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 PRKAR2AP13861 404 aaKnown RBP9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 THPOP40225 353 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 RGS2P41220 211 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 SNX1Q13596 522 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 FSCN1Q16658 493 aaKnown RBP9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 DUOXA2Q1HG44 320 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 SLFN12LQ6IEE8 588 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 TAPT1Q6NXT6 567 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 OR6B3Q8NGW1 331 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 ANKRD36BP1Q96IX9 119 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 HEXIM2Q96MH2 286 aaKnown RBP9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 STK33Q9BYT3 514 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 TTYH3Q9C0H2 523 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 TMEM88BA6NKF7 163 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 SLC16A3O15427 465 aaKnown RBP9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 MAFO75444 373 aaPredicted RBP9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 NFICP08651 508 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 STAG3L1P0CL83 205 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 GHRP10912 638 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 ARF4P18085 180 aaPredicted RBP9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 POLR2BP30876 1174 aaKnown RBP9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 NSFP46459 744 aaKnown RBP9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 TDRD10Q5VZ19 366 aaKnown RBP9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 TRAPPC11Q7Z392 1133 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 ANKRD23Q86SG2 305 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 HAUS1Q96CS2 278 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 KRT12Q99456 494 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 TRIM7Q9C029 511 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 NFASCO94856 1347 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 H0YCG3 227 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 EXTL3O43909 919 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 YY1P25490 414 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 ALCAMQ13740 583 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 SMC1AQ14683 1233 aaKnown RBP9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 CYP4A22Q5TCH4 519 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 AADACL2Q6P093 401 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 CCDC62Q6P9F0 684 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 UBA3Q8TBC4 463 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 LPPQ93052 612 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 ARHGEF26Q96DR7 871 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 CYFIP2Q96F07 1278 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 KREMEN1Q96MU8 473 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 DPH5Q9H2P9 285 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 PTPN22Q9Y2R2 807 aa9.23□□□□□ -0.93
LCLAT1-201ENST00000309052 IQCF3P0C7M6 154 aa9.22□□□□□ -0.93
LCLAT1-201ENST00000309052 ZBTB48P10074 688 aaPredicted RBP9.22□□□□□ -0.93
LCLAT1-201ENST00000309052 GNA15P30679 374 aa9.22□□□□□ -0.93
LCLAT1-201ENST00000309052 RFC5P40937 340 aa9.22□□□□□ -0.93
LCLAT1-201ENST00000309052 DUSP28Q4G0W2 176 aa9.22□□□□□ -0.93
LCLAT1-201ENST00000309052 MFSD14CQ5VZR4 134 aa9.22□□□□□ -0.93
LCLAT1-201ENST00000309052 ZNF516Q92618 1163 aa9.22□□□□□ -0.93
LCLAT1-201ENST00000309052 NUCKS1Q9H1E3 243 aaKnown RBP9.22□□□□□ -0.93
LCLAT1-201ENST00000309052 CNOT8Q9UFF9 292 aaKnown RBP9.22□□□□□ -0.93
LCLAT1-201ENST00000309052 KIAA1217Q5T5P2 1943 aa9.22□□□□□ -0.93
LCLAT1-201ENST00000309052 MMP3P08254 477 aa9.22□□□□□ -0.93
LCLAT1-201ENST00000309052 NCKAP1LP55160 1127 aa9.22□□□□□ -0.93
LCLAT1-201ENST00000309052 ZNF667Q5HYK9 610 aa9.22□□□□□ -0.93
LCLAT1-201ENST00000309052 HGSNATQ68CP4 663 aa9.22□□□□□ -0.93
LCLAT1-201ENST00000309052 SCYL2Q6P3W7 929 aa9.22□□□□□ -0.93
LCLAT1-201ENST00000309052 NOP9Q86U38 636 aaKnown RBP9.22□□□□□ -0.93
LCLAT1-201ENST00000309052 SLC35G2Q8TBE7 412 aa9.22□□□□□ -0.93
LCLAT1-201ENST00000309052 ZFP42Q96MM3 310 aa9.22□□□□□ -0.93
LCLAT1-201ENST00000309052 AGPAT1Q99943 283 aa9.22□□□□□ -0.93
LCLAT1-201ENST00000309052 JPH2Q9BR39 696 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms