RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 KCNK18Q7Z418 384 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 AMIGO2Q86SJ2 522 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 UNC45BQ8IWX7 931 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 TMEM130Q8N3G9 435 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 PXYLP1Q8TE99 480 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 JDP2Q8WYK2 163 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 LRTOMTQ8WZ04 291 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 DACT3Q96B18 629 aaPredicted RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 INTS12Q96CB8 462 aaKnown RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 MRFAP1L1Q96HT8 127 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 EAF1Q96JC9 268 aaPredicted RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 FEZ1Q99689 392 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 NOD2Q9HC29 1040 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 PNPLA8Q9NP80 782 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 CNOT6Q9ULM6 557 aaKnown RBP1.39□□□□□ -2.19
CEP290-201ENST00000309041 LYVE1Q9Y5Y7 322 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 LTBP4Q8N2S1 1624 aa1.39□□□□□ -2.19
CEP290-201ENST00000309041 COL1A2P08123 1366 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 GOLGA8CPA6NN73 597 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 GRXCR1A8MXD5 290 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 NDUFS8O00217 210 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 RAMP1O60894 148 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 TRIM3O75382 744 aaPredicted RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 SRGNP10124 158 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 FGFR1P11362 822 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 MAGP20916 626 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 PAPOLAP51003 745 aaKnown RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 ARSDP51689 593 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 PSMD6Q15008 389 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 TMEM67Q5HYA8 995 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 NKAPLQ5M9Q1 402 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 INTS11Q5TA45 600 aaKnown RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 COL13A1Q5TAT6 717 aaPredicted RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 TOGARAM2Q6ZUX3 1019 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 RFX6Q8HWS3 928 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 SULF2Q8IWU5 870 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 LILRA2Q8N149 483 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 COLGALT1Q8NBJ5 622 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 OR52B4Q8NGK2 314 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 CTCFLQ8NI51 663 aaPredicted RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 SLC35G2Q8TBE7 412 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 PI4K2BQ8TCG2 481 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 CABLES1Q8TDN4 633 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 FAM193BQ96PV7 902 aaPredicted RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 NUDCD1Q96RS6 583 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 GDF15Q99988 308 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 CCDC94Q9BW85 323 aaPredicted RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 INTS2Q9H0H0 1204 aaKnown RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 NELFAQ9H3P2 528 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 NUDT15Q9NV35 164 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 MS4A12Q9NXJ0 267 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 KLHL28Q9NXS3 571 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 ZNRF3Q9ULT6 936 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 RNF6Q9Y252 685 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 EXOSC1Q9Y3B2 195 aaKnown RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 THSD7BQ9C0I4 1608 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 MROH7-TTC4A0A0A0MT08 1334 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 SPATA31A5Q5VU36 1347 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 SPATA31A6Q5VVP1 1343 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 MROH7Q68CQ1 1323 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 SPATA31A7Q8IWB4 1347 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 A0A1W2PRG6 482 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 SCAF4O95104 1147 aaKnown RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 PCDH8O95206 1070 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 YEATS4O95619 227 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 EOMESO95936 686 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 MYCLP12524 364 aaPredicted RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 NPR1P16066 1061 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 PLCG2P16885 1265 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 HLA-DPA1P20036 260 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 SDSP20132 328 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 PRIM2P49643 509 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 RARSP54136 660 aaKnown RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 SH3BGRP55822 239 aaPredicted RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 MAP4K2Q12851 820 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 PIN1Q13526 163 aaPredicted RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 RAB39AQ14964 217 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 PTPAQ15257 358 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 SGCAQ16586 387 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 SLC44A4Q53GD3 710 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 SPATA24Q86W54 205 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 MISPQ8IVT2 679 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 CYP2W1Q8TAV3 490 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 CHURC1Q8WUH1 139 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 HNRNPLLQ8WVV9 542 aaKnown RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 TBC1D31Q96DN5 1066 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 TEFMQ96QE5 360 aaKnown RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 RBM15Q96T37 977 aaKnown RBP eCLIP1.38□□□□□ -2.19
CEP290-201ENST00000309041 RIOK2Q9BVS4 552 aaKnown RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 BCAS3Q9H6U6 928 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 NTN4Q9HB63 628 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 SPON1Q9HCB6 807 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 METRNQ9UJH8 293 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 EIF3LQ9Y262 564 aaKnown RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 CPSF1Q10570 1443 aaKnown RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 TET3O43151 1660 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 LMO7Q8WWI1 1683 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 AK9Q5TCS8 1911 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 WIPF3A6NGB9 483 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms