RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 PALM2Q8IXS6 379 aa16.17■□□□□ 0.18
LEMD3-201ENST00000308330 AK8Q96MA6 479 aa16.17■□□□□ 0.18
LEMD3-201ENST00000308330 CCDC28BQ9BUN5 200 aa16.17■□□□□ 0.18
LEMD3-201ENST00000308330 SPEF1Q9Y4P9 236 aa16.17■□□□□ 0.18
LEMD3-201ENST00000308330 THAP12O43422 761 aa16.17■□□□□ 0.18
LEMD3-201ENST00000308330 TNNC2P02585 160 aa16.17■□□□□ 0.18
LEMD3-201ENST00000308330 FCER1AP12319 257 aa16.17■□□□□ 0.18
LEMD3-201ENST00000308330 MYCLP1P12525 358 aaPredicted RBP16.17■□□□□ 0.18
LEMD3-201ENST00000308330 ATP6V1C1P21283 382 aa16.17■□□□□ 0.18
LEMD3-201ENST00000308330 SNX16P57768 344 aa16.17■□□□□ 0.18
LEMD3-201ENST00000308330 EHHADHQ08426 723 aa16.17■□□□□ 0.18
LEMD3-201ENST00000308330 LBRQ14739 615 aaKnown RBP16.17■□□□□ 0.18
LEMD3-201ENST00000308330 TMEM53Q6P2H8 277 aa16.17■□□□□ 0.18
LEMD3-201ENST00000308330 RFX8Q6ZV50 586 aa16.17■□□□□ 0.18
LEMD3-201ENST00000308330 CLEC10AQ8IUN9 316 aa16.17■□□□□ 0.18
LEMD3-201ENST00000308330 PPP1R16BQ96T49 567 aa16.17■□□□□ 0.18
LEMD3-201ENST00000308330 BHMT2Q9H2M3 363 aa16.17■□□□□ 0.18
LEMD3-201ENST00000308330 ANKZF1Q9H8Y5 726 aa16.17■□□□□ 0.18
LEMD3-201ENST00000308330 TELO2Q9Y4R8 837 aa16.17■□□□□ 0.18
LEMD3-201ENST00000308330 CELF2O95319 508 aaKnown RBP16.16■□□□□ 0.18
LEMD3-201ENST00000308330 ADRM1Q16186 407 aa16.16■□□□□ 0.18
LEMD3-201ENST00000308330 DCUN1D2Q6PH85 259 aa16.16■□□□□ 0.18
LEMD3-201ENST00000308330 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.16■□□□□ 0.18
LEMD3-201ENST00000308330 GALNT6Q8NCL4 622 aa16.16■□□□□ 0.18
LEMD3-201ENST00000308330 PCDHA6Q9UN73 950 aa16.16■□□□□ 0.18
LEMD3-201ENST00000308330 PCDHA8Q9Y5H6 950 aa16.16■□□□□ 0.18
LEMD3-201ENST00000308330 KRT6AP02538 564 aa16.16■□□□□ 0.18
LEMD3-201ENST00000308330 KRT6BP04259 564 aa16.16■□□□□ 0.18
LEMD3-201ENST00000308330 HMOX2P30519 316 aa16.16■□□□□ 0.18
LEMD3-201ENST00000308330 COG2Q14746 738 aa16.16■□□□□ 0.18
LEMD3-201ENST00000308330 LRIG3Q6UXM1 1119 aa16.16■□□□□ 0.18
LEMD3-201ENST00000308330 PSAPP07602 524 aa16.16■□□□□ 0.18
LEMD3-201ENST00000308330 ITIH3Q06033 890 aa16.16■□□□□ 0.18
LEMD3-201ENST00000308330 ADAM9Q13443 819 aa16.16■□□□□ 0.18
LEMD3-201ENST00000308330 CNGA3Q16281 694 aa16.16■□□□□ 0.18
LEMD3-201ENST00000308330 GIPC3Q8TF64 312 aa16.16■□□□□ 0.18
LEMD3-201ENST00000308330 DIABLOQ9NR28 239 aa16.16■□□□□ 0.18
LEMD3-201ENST00000308330 SYBUQ9NX95 663 aa16.16■□□□□ 0.18
LEMD3-201ENST00000308330 ESYT3A0FGR9 886 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 SEMA3DO95025 777 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 RFX5P48382 616 aaPredicted RBP16.15■□□□□ 0.18
LEMD3-201ENST00000308330 ASIC2Q16515 512 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 DHX40Q8IX18 779 aaKnown RBP16.15■□□□□ 0.18
LEMD3-201ENST00000308330 DQX1Q8TE96 717 aaKnown RBP16.15■□□□□ 0.18
LEMD3-201ENST00000308330 PPWD1Q96BP3 646 aaKnown RBP16.15■□□□□ 0.18
LEMD3-201ENST00000308330 TGS1Q96RS0 853 aaKnown RBP16.15■□□□□ 0.18
LEMD3-201ENST00000308330 TRPC7Q9HCX4 862 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 WDR35Q9P2L0 1181 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 ZNF839A8K0R7 811 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 CNOT3O75175 753 aaKnown RBP16.15■□□□□ 0.18
LEMD3-201ENST00000308330 CHN1P15882 459 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 CALB2P22676 271 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 PGM1P36871 562 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 PLTPP55058 493 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 RABGAP1LQ5R372 815 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 CATSPER3Q86XQ3 398 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 ANKRD13CQ8N6S4 541 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 TERB1Q8NA31 727 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 MCRS1Q96EZ8 462 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 PRMT1Q99873 361 aaKnown RBP16.15■□□□□ 0.18
LEMD3-201ENST00000308330 ORC4O43929 436 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 DDX5P17844 614 aaKnown RBP16.15■□□□□ 0.18
LEMD3-201ENST00000308330 CXCL9Q07325 125 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 LIN9Q5TKA1 542 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 ACAD9Q9H845 621 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 PCDHA5Q9Y5H7 936 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 F8VZ95 297 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 FDX1P10109 184 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 CDH3P22223 829 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 PTGS2P35354 604 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 C21orf59P57076 290 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 AP3B2Q13367 1082 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 MTMR1Q13613 665 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 ERICH1Q86X53 443 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 VMP1Q96GC9 406 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 LRRC1Q9BTT6 524 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 IFT122Q9HBG6 1241 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 KMT5AQ9NQR1 393 aa16.15■□□□□ 0.18
LEMD3-201ENST00000308330 DNAJC17Q9NVM6 304 aaKnown RBP16.15■□□□□ 0.18
LEMD3-201ENST00000308330 RBMX2Q9Y388 322 aaKnown RBP16.15■□□□□ 0.18
LEMD3-201ENST00000308330 TCP11X1B4DZS4 312 aa16.14■□□□□ 0.17
LEMD3-201ENST00000308330 MFAP3LO75121 409 aa16.14■□□□□ 0.17
LEMD3-201ENST00000308330 RPN1P04843 607 aaKnown RBP16.14■□□□□ 0.17
LEMD3-201ENST00000308330 ALDH5A1P51649 535 aaPredicted RBP16.14■□□□□ 0.17
LEMD3-201ENST00000308330 KLHL30Q0D2K2 578 aa16.14■□□□□ 0.17
LEMD3-201ENST00000308330 FCHO2Q0JRZ9 810 aa16.14■□□□□ 0.17
LEMD3-201ENST00000308330 TCP11X2Q5H9J9 407 aa16.14■□□□□ 0.17
LEMD3-201ENST00000308330 AGBL2Q5U5Z8 902 aa16.14■□□□□ 0.17
LEMD3-201ENST00000308330 SLC26A7Q8TE54 656 aa16.14■□□□□ 0.17
LEMD3-201ENST00000308330 DHRS1Q96LJ7 313 aa16.14■□□□□ 0.17
LEMD3-201ENST00000308330 LRFN2Q9ULH4 789 aa16.14■□□□□ 0.17
LEMD3-201ENST00000308330 PCDHB6Q9Y5E3 794 aa16.14■□□□□ 0.17
LEMD3-201ENST00000308330 VWDEQ8N2E2 1590 aa16.14■□□□□ 0.17
LEMD3-201ENST00000308330 FAM170AA1A519 330 aa16.14■□□□□ 0.17
LEMD3-201ENST00000308330 AP5Z1O43299 807 aa16.14■□□□□ 0.17
LEMD3-201ENST00000308330 CCDC22O60826 627 aa16.14■□□□□ 0.17
LEMD3-201ENST00000308330 ABL1P00519 1130 aa16.14■□□□□ 0.17
LEMD3-201ENST00000308330 ZBED6P86452 979 aa16.14■□□□□ 0.17
LEMD3-201ENST00000308330 GEN1Q17RS7 908 aa16.14■□□□□ 0.17
LEMD3-201ENST00000308330 TRIM60Q495X7 471 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms