RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 GUF1Q8N442 669 aaKnown RBP11.13□□□□□ -0.63
MSRB3-201ENST00000308259 NEK9Q8TD19 979 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 PAGR1Q9BTK6 254 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 COL4A3BPQ9Y5P4 624 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 IRS2Q9Y4H2 1338 aa11.13□□□□□ -0.63
MSRB3-201ENST00000308259 PHBP35232 272 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 RHBDL3P58872 404 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 CDR2Q01850 454 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 KPNB1Q14974 876 aaKnown RBP11.12□□□□□ -0.63
MSRB3-201ENST00000308259 DCAF17Q5H9S7 520 aaPredicted RBP11.12□□□□□ -0.63
MSRB3-201ENST00000308259 TMEM53Q6P2H8 277 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 TTC8Q8TAM2 541 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 CORO1BQ9BR76 489 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 JMJD4Q9H9V9 463 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 DDX4Q9NQI0 724 aaKnown RBP11.12□□□□□ -0.63
MSRB3-201ENST00000308259 NKX1-2Q9UD57 310 aaPredicted RBP11.12□□□□□ -0.63
MSRB3-201ENST00000308259 PCDHA12Q9UN75 941 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 CASZ1Q86V15 1759 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 SCN7AQ01118 1682 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 CCDC166P0CW27 439 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 ATP6V1B1P15313 513 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 SLC9C1Q4G0N8 1177 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 AGBL2Q5U5Z8 902 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 GJB7Q6PEY0 223 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 LRIG3Q6UXM1 1119 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 ARPC5LQ9BPX5 153 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 CSADQ9Y600 493 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 PCP4L1A6NKN8 68 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 ABLIM1O14639 778 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 RASGRF2O14827 1237 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 SLC9A1P19634 815 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 NEK2P51955 445 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 MAP3K7CLP57077 242 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 PSMC6P62333 389 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 CYP4A11Q02928 519 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 KLHL30Q0D2K2 578 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 CUL1Q13616 776 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 PALB2Q86YC2 1186 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 DNAJC19Q96DA6 116 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 EURLQ9NYK6 297 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 CYP39A1Q9NYL5 469 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 PASKQ96RG2 1323 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 EPHB2P29323 1055 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 TCP10Q12799 353 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 DHRS1Q96LJ7 313 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 DBNDD1Q9H9R9 158 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 MAGEF1Q9HAY2 307 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 NMRK1Q9NWW6 199 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 MTMR4Q9NYA4 1195 aa11.12□□□□□ -0.63
MSRB3-201ENST00000308259 GYG2O15488 501 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 MAP3K13O43283 966 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 ATICP31939 592 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 EIF2B2P49770 351 aaKnown RBP11.11□□□□□ -0.63
MSRB3-201ENST00000308259 PABPC4Q13310 644 aaKnown RBP eCLIP11.11□□□□□ -0.63
MSRB3-201ENST00000308259 AGGF1Q8N302 714 aaeCLIP11.11□□□□□ -0.63
MSRB3-201ENST00000308259 TGS1Q96RS0 853 aaKnown RBP11.11□□□□□ -0.63
MSRB3-201ENST00000308259 DCLRE1BQ9H816 532 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 AS3MTQ9HBK9 375 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 ZC4H2Q9NQZ6 224 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 TUBA8Q9NY65 449 aaPredicted RBP11.11□□□□□ -0.63
MSRB3-201ENST00000308259 POLLQ9UGP5 575 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 AMACRQ9UHK6 382 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 DBR1Q9UK59 544 aaKnown RBP11.11□□□□□ -0.63
MSRB3-201ENST00000308259 PCDHAC2Q9Y5I4 1007 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 COMMD3-BMI1R4GMX3 469 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 KIAA1551Q9HCM1 1747 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 LCA5LO95447 670 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 ITGA2BP08514 1039 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 MYCLP1P12525 358 aaPredicted RBP11.11□□□□□ -0.63
MSRB3-201ENST00000308259 PPP4CP60510 307 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 BASP1P80723 227 aaKnown RBP11.11□□□□□ -0.63
MSRB3-201ENST00000308259 FKBP3Q00688 224 aaKnown RBP11.11□□□□□ -0.63
MSRB3-201ENST00000308259 FIGNQ5HY92 759 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.11□□□□□ -0.63
MSRB3-201ENST00000308259 AASDHPPTQ9NRN7 309 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 RNF181Q9P0P0 153 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 ZNF148Q9UQR1 794 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 CARD8Q9Y2G2 431 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 A6NJR5 290 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 TRIM64CA6NLI5 447 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 TBCAO75347 108 aaKnown RBP11.11□□□□□ -0.63
MSRB3-201ENST00000308259 ZNF76P36508 570 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 EIF3BP55884 814 aaKnown RBP11.11□□□□□ -0.63
MSRB3-201ENST00000308259 CDK17Q00537 523 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 PDE1BQ01064 536 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 ASTE1Q2TB18 679 aaPredicted RBP11.11□□□□□ -0.63
MSRB3-201ENST00000308259 USH1GQ495M9 461 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 EIF2AQ9BY44 585 aaKnown RBP11.11□□□□□ -0.63
MSRB3-201ENST00000308259 RAB34Q9BZG1 259 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 PSTPIP2Q9H939 334 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 DSEQ9UL01 958 aa11.11□□□□□ -0.63
MSRB3-201ENST00000308259 CLIC2O15247 247 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 SPTLC1O15269 473 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 KRT75O95678 551 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 PLA2G4BP0C869 781 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 VAV1P15498 845 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 CHRNA5P30532 468 aa11.1□□□□□ -0.63
MSRB3-201ENST00000308259 HNRNPH3P31942 346 aaKnown RBP11.1□□□□□ -0.63
MSRB3-201ENST00000308259 BYSLQ13895 437 aaKnown RBP11.1□□□□□ -0.63
MSRB3-201ENST00000308259 ZNF662Q6ZS27 426 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms