RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 EPC2Q52LR7 807 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 MMGT1Q8N4V1 131 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 CCT6BQ92526 530 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 PRMT7Q9NVM4 692 aaPredicted RBP12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 DDX56Q9NY93 547 aaKnown RBP12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 PPP2R3BQ9Y5P8 575 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 ATP8B3O60423 1300 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 COL14A1Q05707 1796 aaKnown RBP12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 PSMC4P43686 418 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 MAGOHP61326 146 aaKnown RBP12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 KIAA1755Q5JYT7 1200 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 USP38Q8NB14 1042 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 FAF2Q96CS3 445 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 PARK7Q99497 189 aaKnown RBP12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 RANBP17Q9H2T7 1088 aaKnown RBP12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 LRFN2Q9ULH4 789 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 RRP15Q9Y3B9 282 aaKnown RBP12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 TACC3Q9Y6A5 838 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 GTPBP10A4D1E9 387 aaKnown RBP12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 TNPO2O14787 897 aaKnown RBP12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 ATMINO43313 823 aaPredicted RBP12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 SAT1P21673 171 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 RBP5P82980 135 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 TAF1CQ15572 869 aaPredicted RBP12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 NIPA1Q7RTP0 329 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 SDCCAG8Q86SQ7 713 aaPredicted RBP12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 TPCN2Q8NHX9 752 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 INPP5FQ9Y2H2 1132 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 KRT14P02533 472 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 SLC12A3P55017 1021 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 KLC2Q9H0B6 622 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 STK38LQ9Y2H1 464 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 ROBO3Q96MS0 1386 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 GAS2O43903 313 aaKnown RBP12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 CETPP11597 493 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 CDC42EP1Q00587 391 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 PAPD7Q5XG87 772 aaKnown RBP12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 RAB3IL1Q8TBN0 382 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 ZNF384Q8TF68 577 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 RNF139Q8WU17 664 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 THAP2Q9H0W7 228 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 INTS13Q9NVM9 706 aa12.13□□□□□ -0.47
PCDHGC3-201ENST00000308177 RAD51CO43502 376 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 GARTP22102 1010 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 GPS1Q13098 491 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 LAMC2Q13753 1193 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 TMEM132DQ14C87 1099 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 PCGF5Q86SE9 256 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 ATL2Q8NHH9 583 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 SNF8Q96H20 258 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 ZNF560Q96MR9 790 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 PACSIN1Q9BY11 444 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 TMEM117Q9H0C3 514 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 EHD2Q9NZN4 543 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 GTF3C4Q9UKN8 822 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 PIN4Q9Y237 131 aaKnown RBP12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 SNX9Q9Y5X1 595 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 CYP3A7-CYP3A51PA0A087WV96 503 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 SRGAP2BP0DMP2 458 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 CYP3A7P24462 503 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 NAMPTP43490 491 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 ARPP19P56211 112 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 KRT17Q04695 432 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 TATDN1Q6P1N9 297 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 ZNF677Q86XU0 584 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 ZNF710Q8N1W2 664 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 C4orf32Q8N8J7 132 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 SMC1BQ8NDV3 1235 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 SPATA20Q8TB22 786 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 ATP6V1G3Q96LB4 118 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 TRIM51Q9BSJ1 452 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 NIF3L1Q9GZT8 377 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 CHORDC1Q9UHD1 332 aaPredicted RBP12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 PI4K2BG5E9Z4 385 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 ZBTB39O15060 712 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 PHF2O75151 1096 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 ZNF571Q7Z3V5 609 aaPredicted RBP12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 GPATCH11Q8N954 259 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 SENP7Q9BQF6 1050 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 WDR35Q9P2L0 1181 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 FRMPD4Q14CM0 1322 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 GOLGA8MH3BSY2 632 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 PGK2P07205 417 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 WEE2P0C1S8 567 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 PRLRP16471 622 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 ADORA2BP29275 332 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 HNRNPH2P55795 449 aaKnown RBP12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 BCAR1P56945 870 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 CDR2LQ86X02 465 aaPredicted RBP12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 GDAP1Q8TB36 358 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 HNRNPLLQ8WVV9 542 aaKnown RBP12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 SLC35C1Q96A29 364 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 CFAP36Q96G28 342 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 CARD9Q9H257 536 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 SLC12A6Q9UHW9 1150 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 STAP1Q9ULZ2 295 aa12.12□□□□□ -0.47
PCDHGC3-201ENST00000308177 F8VZ95 297 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 PIK3CDO00329 1044 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 IL18RAPO95256 599 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms