RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 RBAKQ9NYW8 714 aaPredicted RBP12.84□□□□□ -0.35
TRIM40-205ENST00000307859 SALL4Q9UJQ4 1053 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 CNTNAP2Q9UHC6 1331 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 PDCD11Q14690 1871 aaKnown RBP12.83□□□□□ -0.36
TRIM40-205ENST00000307859 A6NJR5 290 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 FOXN3O00409 490 aaPredicted RBP12.83□□□□□ -0.36
TRIM40-205ENST00000307859 TACC1O75410 805 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 TADA3O75528 432 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 C4BPAP04003 597 aaKnown RBP12.83□□□□□ -0.36
TRIM40-205ENST00000307859 RGS2P41220 211 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 MATR3P43243 847 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRIM40-205ENST00000307859 IGBP1P78318 339 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 MBTD1Q05BQ5 628 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 MCL1Q07820 350 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 FAM187BQ17R55 369 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 ALKBH5Q6P6C2 394 aaKnown RBP12.83□□□□□ -0.36
TRIM40-205ENST00000307859 MTHFD1LQ6UB35 978 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 TSHZ1Q6ZSZ6 1077 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 TRAPPC11Q7Z392 1133 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 BRSK2Q8IWQ3 736 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 MNS1Q8NEH6 495 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 LNX1Q8TBB1 728 aaPredicted RBP12.83□□□□□ -0.36
TRIM40-205ENST00000307859 SHC3Q92529 594 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 NLRP4Q96MN2 994 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 NT5C1BQ96P26 610 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 FNBP1Q96RU3 617 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 CGRRF1Q99675 332 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 APBA2Q99767 749 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 PDE11AQ9HCR9 933 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 PTPRHQ9HD43 1115 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 GJD2Q9UKL4 321 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 INTUQ9ULD6 942 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 PTPRJQ12913 1337 aa12.83□□□□□ -0.36
TRIM40-205ENST00000307859 EFCAB8A8MWE9 144 aa12.82□□□□□ -0.36
TRIM40-205ENST00000307859 OGTO15294 1046 aa12.82□□□□□ -0.36
TRIM40-205ENST00000307859 MOCS3O95396 460 aa12.82□□□□□ -0.36
TRIM40-205ENST00000307859 F2P00734 622 aa12.82□□□□□ -0.36
TRIM40-205ENST00000307859 ATP1A1P05023 1023 aaKnown RBP12.82□□□□□ -0.36
TRIM40-205ENST00000307859 PHKA2P46019 1235 aa12.82□□□□□ -0.36
TRIM40-205ENST00000307859 MFAP3P55082 362 aa12.82□□□□□ -0.36
TRIM40-205ENST00000307859 PPFIA1Q13136 1202 aa12.82□□□□□ -0.36
TRIM40-205ENST00000307859 GRIK4Q16099 956 aa12.82□□□□□ -0.36
TRIM40-205ENST00000307859 WHAMMP3Q1A5X7 153 aa12.82□□□□□ -0.36
TRIM40-205ENST00000307859 KIAA0753Q2KHM9 967 aa12.82□□□□□ -0.36
TRIM40-205ENST00000307859 MPZL3Q6UWV2 235 aa12.82□□□□□ -0.36
TRIM40-205ENST00000307859 FAM71AQ8IYT1 594 aa12.82□□□□□ -0.36
TRIM40-205ENST00000307859 ZNF710Q8N1W2 664 aa12.82□□□□□ -0.36
TRIM40-205ENST00000307859 SH3TC2Q8TF17 1288 aa12.82□□□□□ -0.36
TRIM40-205ENST00000307859 KAT5Q92993 513 aa12.82□□□□□ -0.36
TRIM40-205ENST00000307859 FAM81BQ96LP2 452 aa12.82□□□□□ -0.36
TRIM40-205ENST00000307859 ALS2CR12Q96Q35 445 aa12.82□□□□□ -0.36
TRIM40-205ENST00000307859 PACSIN1Q9BY11 444 aa12.82□□□□□ -0.36
TRIM40-205ENST00000307859 IFT122Q9HBG6 1241 aa12.82□□□□□ -0.36
TRIM40-205ENST00000307859 INO80B-WBP1J3KQ70 363 aa12.81□□□□□ -0.36
TRIM40-205ENST00000307859 CAPN2P17655 700 aa12.81□□□□□ -0.36
TRIM40-205ENST00000307859 TMOD1P28289 359 aa12.81□□□□□ -0.36
TRIM40-205ENST00000307859 GJA8P48165 433 aa12.81□□□□□ -0.36
TRIM40-205ENST00000307859 GCNT1Q02742 428 aa12.81□□□□□ -0.36
TRIM40-205ENST00000307859 PRPF4BQ13523 1007 aaKnown RBP12.81□□□□□ -0.36
TRIM40-205ENST00000307859 NAA30Q147X3 362 aaPredicted RBP12.81□□□□□ -0.36
TRIM40-205ENST00000307859 CCL14Q16627 93 aa12.81□□□□□ -0.36
TRIM40-205ENST00000307859 PRAMEF19Q5SWL8 479 aa12.81□□□□□ -0.36
TRIM40-205ENST00000307859 MARCH8Q5T0T0 291 aa12.81□□□□□ -0.36
TRIM40-205ENST00000307859 TDRD10Q5VZ19 366 aaKnown RBP12.81□□□□□ -0.36
TRIM40-205ENST00000307859 ENOSF1Q7L5Y1 443 aa12.81□□□□□ -0.36
TRIM40-205ENST00000307859 PPM1KQ8N3J5 372 aa12.81□□□□□ -0.36
TRIM40-205ENST00000307859 DEFB123Q8N688 67 aa12.81□□□□□ -0.36
TRIM40-205ENST00000307859 NOX5Q96PH1 765 aa12.81□□□□□ -0.36
TRIM40-205ENST00000307859 INO80BQ9C086 356 aaPredicted RBP12.81□□□□□ -0.36
TRIM40-205ENST00000307859 MINDY3Q9H8M7 445 aa12.81□□□□□ -0.36
TRIM40-205ENST00000307859 PRMT7Q9NVM4 692 aaPredicted RBP12.81□□□□□ -0.36
TRIM40-205ENST00000307859 CPSF3Q9UKF6 684 aaKnown RBP12.81□□□□□ -0.36
TRIM40-205ENST00000307859 TNFSF13BQ9Y275 285 aa12.81□□□□□ -0.36
TRIM40-205ENST00000307859 JRKLQ9Y4A0 524 aa12.81□□□□□ -0.36
TRIM40-205ENST00000307859 SCN10AQ9Y5Y9 1956 aa12.81□□□□□ -0.36
TRIM40-205ENST00000307859 ENC1O14682 589 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 TNPO2O14787 897 aaKnown RBP12.8□□□□□ -0.36
TRIM40-205ENST00000307859 DYNC1LI2O43237 492 aaPredicted RBP12.8□□□□□ -0.36
TRIM40-205ENST00000307859 VNN1O95497 513 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 HLA-DRAP01903 254 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 TNNI1P19237 187 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 CYP2B6P20813 491 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 CYP2C19P33261 490 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 AP3M2P53677 418 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 SURF1Q15526 300 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 AMHR2Q16671 573 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 ATF7IP2Q5U623 682 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 SRGAP1Q7Z6B7 1085 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 TLK2Q86UE8 772 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 WDR49Q8IV35 697 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 GLYCTKQ8IVS8 523 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 CEP112Q8N8E3 955 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 AGPAT1Q99943 283 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 PRDM6Q9NQX0 595 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 C1orf112Q9NSG2 853 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 Q9Y3F1 56 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 PCDHGC5Q9Y5F6 944 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 SAR1BQ9Y6B6 198 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 A0A087WZ62 844 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 A0A0A6YYK5 440 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms