RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 PPP2R3BQ9Y5P8 575 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 DDHD2O94830 711 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 PDXDC2PQ6P474 469 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 ANKMY2Q8IV38 441 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 IFNL3Q8IZI9 196 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 GSTM1P09488 218 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 ZNF667Q5HYK9 610 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 ARMC4Q5T2S8 1044 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 DDI1Q8WTU0 396 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 LATS2Q9NRM7 1088 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 BCAP31P51572 246 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 LAMB3Q13751 1172 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 DPY19L2Q6NUT2 758 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 STKLD1Q8NE28 680 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 ABCC4O15439 1325 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 ITGA3P26006 1051 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 MB21D1Q8N884 522 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 PIGUQ9H490 435 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 VAMP4O75379 141 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 MFN2O95140 757 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 MYL2P10916 166 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 OSBPP22059 807 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 CTSWP56202 376 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 YWHAZP63104 245 aaKnown RBP14.08□□□□□ -0.16
TRIM56-201ENST00000306085 CBFBQ13951 182 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 G2E3Q7L622 706 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 C19orf44Q9H6X5 657 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 SLC9A2Q9UBY0 812 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 CNOT8Q9UFF9 292 aaKnown RBP14.08□□□□□ -0.16
TRIM56-201ENST00000306085 A0A0D9SFI3 127 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 E9PBE3 544 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 PSMA4P25789 261 aaKnown RBP14.07□□□□□ -0.16
TRIM56-201ENST00000306085 PLA2G4AP47712 749 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 SPATA21Q7Z572 469 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 MICALL2Q8IY33 904 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 YTHDC2Q9H6S0 1430 aaKnown RBP14.07□□□□□ -0.16
TRIM56-201ENST00000306085 ATP9BO43861 1147 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 MYL3P08590 195 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 BTDP43251 543 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 PHKG1Q16816 387 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 TAF4O00268 1085 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 ZNF211Q13398 564 aaPredicted RBP14.07□□□□□ -0.16
TRIM56-201ENST00000306085 PDZK1Q5T2W1 519 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRIM56-201ENST00000306085 RNF25Q96BH1 459 aaPredicted RBP14.07□□□□□ -0.16
TRIM56-201ENST00000306085 TRABDQ9H4I3 376 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 K7ERI5 159 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 CACNB2Q08289 660 aaPredicted RBP14.07□□□□□ -0.16
TRIM56-201ENST00000306085 GCKRQ14397 625 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 VSTM4Q8IW00 320 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 FLT4P35916 1363 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.07□□□□□ -0.16
TRIM56-201ENST00000306085 APOL1O14791 398 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 ARSEP51690 589 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 DOK7Q18PE1 504 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 WDR36Q8NI36 951 aaKnown RBP14.07□□□□□ -0.16
TRIM56-201ENST00000306085 PLEKHA5Q9HAU0 1116 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 ATP1A4Q13733 1029 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 DNAL1Q4LDG9 190 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 CMTM5Q96DZ9 223 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 FAM129BQ96TA1 746 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 TINF2Q9BSI4 451 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 TSEN34Q9BSV6 310 aaKnown RBP14.07□□□□□ -0.16
TRIM56-201ENST00000306085 EMILIN3Q9NT22 766 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 PLA2G4BP0C869 781 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 PKP1Q13835 747 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 SUCLG2Q96I99 432 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 GCFC2P16383 781 aaKnown RBP14.07□□□□□ -0.16
TRIM56-201ENST00000306085 KLHL12Q53G59 568 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 GRAMD1AQ96CP6 724 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 SAC3D1A6NKF1 404 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 TTLL1O95922 423 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 MOCS2O96007 188 aaPredicted RBP14.07□□□□□ -0.16
TRIM56-201ENST00000306085 TBCKQ8TEA7 893 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 CLMNQ96JQ2 1002 aa14.07□□□□□ -0.16
TRIM56-201ENST00000306085 SMNDC1O75940 238 aaKnown RBP eCLIP14.06□□□□□ -0.16
TRIM56-201ENST00000306085 TSPAN9O75954 239 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 MKRN3Q13064 507 aaKnown RBP14.06□□□□□ -0.16
TRIM56-201ENST00000306085 EFHC2Q5JST6 749 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 SPASTQ9UBP0 616 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 PDE4DIPQ5VU43 2346 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 AP1S2P56377 157 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 MAPK11Q15759 364 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 ZNF564Q8TBZ8 553 aaPredicted RBP14.06□□□□□ -0.16
TRIM56-201ENST00000306085 EDC3Q96F86 508 aaKnown RBP14.06□□□□□ -0.16
TRIM56-201ENST00000306085 ADAM33Q9BZ11 813 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 C6orf62Q9GZU0 229 aaPredicted RBP14.06□□□□□ -0.16
TRIM56-201ENST00000306085 AVENQ9NQS1 362 aaPredicted RBP14.06□□□□□ -0.16
TRIM56-201ENST00000306085 M0QYV0 167 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 LRRC8DQ7L1W4 858 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 HS6ST3Q8IZP7 471 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 NDST4Q9H3R1 872 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 BFARQ9NZS9 450 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 GYG1P46976 350 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 SKIV2LQ15477 1246 aaKnown RBP14.06□□□□□ -0.16
TRIM56-201ENST00000306085 HIC2Q96JB3 615 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 BCAMP50895 628 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 URGCPQ8TCY9 931 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 TRPC7Q9HCX4 862 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 LRRIQ3A6PVS8 624 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms